
Pay0010339.1 (mRNA) Melon (Payzawat) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGTAAAGAACAGTGAAACTGAAAAGGAAAAGGCACGCGGATACAGAGAAGAACAACAACAACAACATTCCTCTCCTCAAAAACTCAAATTCATTTCCCTCACTTTCCATTCTCAATTCCATTTTTATTTTTATCTTTTTTCACTTTTCAAATCCCATTCTTCCTTTCCCTTCCCCGATTCCCCATCTCCGCCGCTTCTTTCACTCTTCTACACCAACCGGAAGATATTGCCTAAAATGTTGTGTAGAATCGTCACAGTGTCGAGCAGGAAAAAGATTGGTGCGGTTCCTGTTTACCTTAATGTCTACGATTTAACGCCGATTAATGGGTATGCCTATTGGCTTGGCCTCGGTGTTTACCATTCCGGCGTACAAGGTCAGCAACGATTCTGTCCTTTTTCTTTTCTTTCTTTCTTTCTTTTTTCTTTTTTTTTTTTATTTGTTTTACTTTTCCGCTTTTTTCTCGCCTTCTGGTCTGTTTGTTTCCTGAGAAAGTGACTCCCAAAGTCGGGAGTTGGATTGTAATCGTTTTGCTGTTAGGAATAGTAAAATCTTTGGTGAATGATTTGTTAATTTTGTAATTTACGAACATTTAAGCAGATCTTAGGTCTTGAGAATCTGTTTTCTTGTATTGATTTACTCTGATTTCTTTAATATAATAAAATTGATTTGAGAAAGGGGAATATGTGAATTAGAGATAAACGGTGATTTAGGTTGAATTTGGTTGCAGTTCATGGAGTTGAGTACGCATTTGGAGCTCATGAGCATGCGAGTACAGGGATATTCGAAGTGGAACCAAAGCATTGTCCAGGATTCACATACAGAAAATCAATTTTAATAGGAAGAACGAATCTAAGTCCTAGGGAGATTCGATCATTCATGGAGAAACTAGCCGAAGAGTATTCTGGAAATACCTATCATCTCATCACCAAAAACTGTAACCATTTTTGCAACGACGTTTGTGTCAGATTGACAGGAAAACCAATCCCTAGATGGGTAAATCGTCTTGCTCGACTCGGTAACTTACTTTCTCTGTTCATGATTTGAATCGTTTGTGTCAGAGAATGCATAAATGTAATTGAATTGGTGTTTATGGAATAGGGTTTCTATGCAACTGTGTTCTACCGGTGGGATTGAATGAAATGAAGGTTGGTGAAGTGAAAGCAGACCAGAACAGAGAGAAGAAGAAGCTGAGAACACAATCAAGTAGATATCCAAGTGGTTTGAATTCTGGAGCTGCAGCAACTCCGACCCCATTATCTTCTTCAAAAGCTTCAAATTCCATGGTTAGAAAAACAAGTAAACAAACACATTCTGCTCCATCTTCTTCCTCTATTTTGCTCTCTTCTTCAACCTCTACTTTCCTGTTGAAGCTGTAGTTTTATGATTAATTTGGATTATTCCCTAATTAAACTTCTAGAATTTCCTAATTTTAATTGTTGAAAAATAGGTGTATGTATATTTTTAATATATATGATGTGTTTCCCTGTTATTTTATTGGTTATGGAATGTTGGAGGTGATGTTTTTATCGGTATTTAGATAGTACTTGACAAGGAGAGTTTAGGAAAAGTCATATGATCCATTCCTTATTTGAGATCTCTTGTTCTCAGGTACATATAAATCCAAGTTAAGTTGAGCCAGTATTGTCGATGTACATTGTTTAATATTTCTTGTACTTAATTTATTAACAATTGTATGACAAAGTTATTTTCGGTATTCATC AAAGTAAAGAACAGTGAAACTGAAAAGGAAAAGGCACGCGGATACAGAGAAGAACAACAACAACAACATTCCTCTCCTCAAAAACTCAAATTCATTTCCCTCACTTTCCATTCTCAATTCCATTTTTATTTTTATCTTTTTTCACTTTTCAAATCCCATTCTTCCTTTCCCTTCCCCGATTCCCCATCTCCGCCGCTTCTTTCACTCTTCTACACCAACCGGAAGATATTGCCTAAAATGTTGTGTAGAATCGTCACAGTGTCGAGCAGGAAAAAGATTGGTGCGGTTCCTGTTTACCTTAATGTCTACGATTTAACGCCGATTAATGGGTATGCCTATTGGCTTGGCCTCGGTGTTTACCATTCCGGCGTACAAGTTCATGGAGTTGAGTACGCATTTGGAGCTCATGAGCATGCGAGTACAGGGATATTCGAAGTGGAACCAAAGCATTGTCCAGGATTCACATACAGAAAATCAATTTTAATAGGAAGAACGAATCTAAGTCCTAGGGAGATTCGATCATTCATGGAGAAACTAGCCGAAGAGTATTCTGGAAATACCTATCATCTCATCACCAAAAACTGTAACCATTTTTGCAACGACGTTTGTGTCAGATTGACAGGAAAACCAATCCCTAGATGGGTAAATCGTCTTGCTCGACTCGGGTTTCTATGCAACTGTGTTCTACCGGTGGGATTGAATGAAATGAAGGTTGGTGAAGTGAAAGCAGACCAGAACAGAGAGAAGAAGAAGCTGAGAACACAATCAAGTAGATATCCAAGTGGTTTGAATTCTGGAGCTGCAGCAACTCCGACCCCATTATCTTCTTCAAAAGCTTCAAATTCCATGGTTAGAAAAACAAGTAAACAAACACATTCTGCTCCATCTTCTTCCTCTATTTTGCTCTCTTCTTCAACCTCTACTTTCCTGTTGAAGCTGTAGTTTTATGATTAATTTGGATTATTCCCTAATTAAACTTCTAGAATTTCCTAATTTTAATTGTTGAAAAATAGGTGTATGTATATTTTTAATATATATGATGTGTTTCCCTGTTATTTTATTGGTTATGGAATGTTGGAGGTGATGTTTTTATCGGTATTTAGATAGTACTTGACAAGGAGAGTTTAGGAAAAGTCATATGATCCATTCCTTATTTGAGATCTCTTGTTCTCAGGTACATATAAATCCAAGTTAAGTTGAGCCAGTATTGTCGATGTACATTGTTTAATATTTCTTGTACTTAATTTATTAACAATTGTATGACAAAGTTATTTTCGGTATTCATC ATGTTGTGTAGAATCGTCACAGTGTCGAGCAGGAAAAAGATTGGTGCGGTTCCTGTTTACCTTAATGTCTACGATTTAACGCCGATTAATGGGTATGCCTATTGGCTTGGCCTCGGTGTTTACCATTCCGGCGTACAAGTTCATGGAGTTGAGTACGCATTTGGAGCTCATGAGCATGCGAGTACAGGGATATTCGAAGTGGAACCAAAGCATTGTCCAGGATTCACATACAGAAAATCAATTTTAATAGGAAGAACGAATCTAAGTCCTAGGGAGATTCGATCATTCATGGAGAAACTAGCCGAAGAGTATTCTGGAAATACCTATCATCTCATCACCAAAAACTGTAACCATTTTTGCAACGACGTTTGTGTCAGATTGACAGGAAAACCAATCCCTAGATGGGTAAATCGTCTTGCTCGACTCGGGTTTCTATGCAACTGTGTTCTACCGGTGGGATTGAATGAAATGAAGGTTGGTGAAGTGAAAGCAGACCAGAACAGAGAGAAGAAGAAGCTGAGAACACAATCAAGTAGATATCCAAGTGGTTTGAATTCTGGAGCTGCAGCAACTCCGACCCCATTATCTTCTTCAAAAGCTTCAAATTCCATGGTTAGAAAAACAAGTAAACAAACACATTCTGCTCCATCTTCTTCCTCTATTTTGCTCTCTTCTTCAACCTCTACTTTCCTGTTGAAGCTGTAG MLCRIVTVSSRKKIGAVPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYAFGAHEHASTGIFEVEPKHCPGFTYRKSILIGRTNLSPREIRSFMEKLAEEYSGNTYHLITKNCNHFCNDVCVRLTGKPIPRWVNRLARLGFLCNCVLPVGLNEMKVGEVKADQNREKKKLRTQSSRYPSGLNSGAAATPTPLSSSKASNSMVRKTSKQTHSAPSSSSILLSSSTSTFLLKL Homology
BLAST of Pay0010339.1 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 8.1e-54 Identity = 82/134 (61.19%), Postives = 114/134 (85.07%), Query Frame = 0
BLAST of Pay0010339.1 vs. ExPASy Swiss-Prot
Match: Q5PQ09 (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.4e-29 Identity = 61/136 (44.85%), Postives = 88/136 (64.71%), Query Frame = 0
BLAST of Pay0010339.1 vs. ExPASy Swiss-Prot
Match: H2KZK4 (Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4.5 PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.6e-28 Identity = 82/234 (35.04%), Postives = 132/234 (56.41%), Query Frame = 0
BLAST of Pay0010339.1 vs. ExPASy Swiss-Prot
Match: Q6DC39 (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.4e-28 Identity = 57/136 (41.91%), Postives = 90/136 (66.18%), Query Frame = 0
BLAST of Pay0010339.1 vs. ExPASy Swiss-Prot
Match: Q5ZIV7 (Deubiquitinase DESI2 OS=Gallus gallus OX=9031 GN=DESI2 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.7e-27 Identity = 57/135 (42.22%), Postives = 89/135 (65.93%), Query Frame = 0
BLAST of Pay0010339.1 vs. ExPASy TrEMBL
Match: A0A1S3BC80 (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103488341 PE=3 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.1e-127 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of Pay0010339.1 vs. ExPASy TrEMBL
Match: A0A0A0LPQ8 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382570 PE=3 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 4.1e-125 Identity = 229/234 (97.86%), Postives = 232/234 (99.15%), Query Frame = 0
BLAST of Pay0010339.1 vs. ExPASy TrEMBL
Match: A0A5A7VEZ3 (DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002110 PE=3 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 7.2e-114 Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Pay0010339.1 vs. ExPASy TrEMBL
Match: A0A6J1GJJ4 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111454442 PE=3 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 7.2e-106 Identity = 202/234 (86.32%), Postives = 214/234 (91.45%), Query Frame = 0
BLAST of Pay0010339.1 vs. ExPASy TrEMBL
Match: A0A6J1BTH1 (deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111005186 PE=3 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 2.7e-105 Identity = 201/235 (85.53%), Postives = 215/235 (91.49%), Query Frame = 0
BLAST of Pay0010339.1 vs. NCBI nr
Match: XP_008445255.1 (PREDICTED: deSI-like protein At4g17486 [Cucumis melo]) HSP 1 Score: 465.7 bits (1197), Expect = 2.4e-127 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0
BLAST of Pay0010339.1 vs. NCBI nr
Match: XP_004138707.1 (deSI-like protein At4g17486 [Cucumis sativus] >KGN62984.1 hypothetical protein Csa_022110 [Cucumis sativus]) HSP 1 Score: 457.2 bits (1175), Expect = 8.4e-125 Identity = 229/234 (97.86%), Postives = 232/234 (99.15%), Query Frame = 0
BLAST of Pay0010339.1 vs. NCBI nr
Match: KAA0064896.1 (deSI-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 419.9 bits (1078), Expect = 1.5e-113 Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Pay0010339.1 vs. NCBI nr
Match: XP_038885545.1 (deSI-like protein At4g17486 [Benincasa hispida]) HSP 1 Score: 407.5 bits (1046), Expect = 7.6e-110 Identity = 213/234 (91.03%), Postives = 220/234 (94.02%), Query Frame = 0
BLAST of Pay0010339.1 vs. NCBI nr
Match: KAG6585494.1 (DeSI-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 393.3 bits (1009), Expect = 1.5e-105 Identity = 202/234 (86.32%), Postives = 214/234 (91.45%), Query Frame = 0
BLAST of Pay0010339.1 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 294.7 bits (753), Expect = 6.7e-80 Identity = 146/226 (64.60%), Postives = 174/226 (76.99%), Query Frame = 0
BLAST of Pay0010339.1 vs. TAIR 10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 271.6 bits (693), Expect = 6.1e-73 Identity = 139/222 (62.61%), Postives = 165/222 (74.32%), Query Frame = 0
BLAST of Pay0010339.1 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 259.6 bits (662), Expect = 2.4e-69 Identity = 134/233 (57.51%), Postives = 169/233 (72.53%), Query Frame = 0
BLAST of Pay0010339.1 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). ) HSP 1 Score: 259.6 bits (662), Expect = 2.4e-69 Identity = 131/227 (57.71%), Postives = 162/227 (71.37%), Query Frame = 0
BLAST of Pay0010339.1 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 234.2 bits (596), Expect = 1.1e-61 Identity = 104/169 (61.54%), Postives = 132/169 (78.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|