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Csor.00g221930.m01 (mRNA) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCGCCCTTACAAATCCGAAGGTACAGAGCATTCGTGAAGAGGTATTTTCGATGGCGGATCAAAATCTCACGGCGGAAAGCGAATCGCTTACGGACCTGAAAAGCACTACGACCGAGATAAATGGGCCGTCGGATGACGAAGACACGTCGATCGGGAACAGCGGAATCGTCGGCGAAGGGCATCTTGAAGAATTGTCCAGCGGTGAGGTGATTTCAAAGAAAAAGAGAAGAGGAAGGCCGAGGAGAAAAGCATCCATCGACCTGGAGAAGCCATCATCGCCGTCATCGCAGGGGAGCCTCTCGTCGTCCGCCAATTCACGAAACACTTCGAAACGCCGCCTTGGGCGGCCGCCTGGTAGTGGTAGGTTGCAGCTTTTCGCATCTTTAGGTACGCTAGGTTTCAACTCTCGATTCCGTCAATCGGTTTTTCTTTTTCAATGCGTAACGCGCCGCCGCCGTGAAAATCGCACGTAACCGTCAGTTGTTTCTTTTCGTTTCTTGGATTAGGTCGTTCTCTATATTCTTGTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCATTTTCACGTTAATTTTGATTTTTTTTTTCTCTTTCAACTGAATATATATATATATATATTTTAAGAGAAAAATCTATTATTATTTATATAAACTAAGTATTTCTTCTTTTTCCTTTTTTAAACTGAACGGAATCGTAAAGTATTTTTGTTTTAAATTTTTTTATTATTCTTTTTGCGACCATATTTTCTTTTTTAAAAATAAACTCAATTTTTGTTTCAAAACAATTTTATTATTTTATTTATTTTAAAAAACATATAAATACTTTTTTATTTTTTTAATATAAATAACCCAATATTTCTTATTTAACTAATTTAATATTAAATTCAAGTACCGAATAAAAAAGTTCAACATTTATTAGAAACCTTTTAAAATTAAATAATATTCCAAAAAAAAAATGATTACGAATTTTAAATTTCAGACTTCATTTTTAGGTTAATGAAAATCAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATTTTCTGTTTAATATTGAGTCGAACCTTGGACTCAGAACGGGGTTATCGAGATGTTTGAAATCTGCGTCTGTGAAGGTTAAATTTGTTTTGAAATTATTATATTTATTAATAGTCTCGAATATATTTGAAGATGGTTTTGCTTGGGACACTGCCGGCGGAAGTTTTACCCCCCACATCCTCCATATTCCAAAAGGAGAGGTAAGGAATAAATATGTATAACTCATGATTTAATTCATAAGCTATGAAAGTTTATTGCATTTAATTATTAATTAAGATATGATATGTAATTAGTTTTATAAGTTTGAGTCAATTCCAGCATTGTTGAATGAATTTGATACTAGTTATCATCGTAGAAGTTGATAGTTTAATATATATAATCATTCATTTGCTTTAATCAAAATCAGACCGTCACATAGACTCTGAGTATAATTTGTTGAAGATGGTTGGGAGGGAGTTGCACGTTAGCTAATTAAATAGATGATCATGGGTTTATAAGAACGAATACATAACAAAAAAATAAAGTCACGAGAGCATATGCTCAAAGTGGACAATATCATACCATTATGGAGAATTGTGTGAGTATATATGCAGAGTAATTAAGTGTTAAATGTGTGCAGGATATTGTGAAGGGTCTATCAAGATTCTCAAAGAAAGGTCCTCGAGCAATCTGCATAATTTCTGCTGTTGGTTCAGTTTCGAGCGTTCATCTCCGCCAAGTTGATGCGAAGCCCAACACCACACAGAAATTCCAGGTTTGTTTATGACGAAACTATTATTTGGTGGATGAAATAGAGTGTGATGTACACATTAGACCCTCATAAGAGAGTGTAGAAACTTTTCCTTAGTAAATGTGTTTTAAAGTCTTGAGGGGAAACCCAAAAGGGAAAGTCCAAAGAAGACAATATCTACTAACAGTGGATTTGAGTCGGAGATTAAAACACTTTATATTTATGGATATGAATGTGAATGTGCAGGGAATGTTTGAGATTCTGCGCATAACAGGGTCGTTTGTGGGACAAATGAACGGTAAACGCACTAAAGTGGGACAGGTTTCCATTTCACTCGCTCATCCTGACGGGCGAGTTTTTGGGGGCGTCGTTGCTTCTGCACTAATAGCAGCCACCCCCATTCAGGTATCTCTCATTTCGTTTCAAATTTGAAAACCTTATTGCATCTTTAACATTTTAAGATTATATTTGCAACTATACTAATTCGAGTGAATGTCGAGATTAGTCGCTCGAAAGAAAAACTCGACTTTGTAGTAATTCAATTCAATTCTTGTCAATATACCATCGTCTCATATGAATTTGATTGTCTATAATAACATGAACAATAGAAAGTTGGAATGTACTTCTGATTAAATATAATTGTTACCCATATGATCTGATTTGGTACCTGTGTTACATCATGATGAATCTTTTCAAATTATCATAATAGTAAGATCAAATATCTTTAATATTGTATCATACCCTTGATTTTAATTTGAGATCCATGTGTTGATAGATTGTTGTGGCAAGCTTTAAGCAAAAAATTAGCCCTGCAGTTAAAAGGATGCACACACCAGCTCACAACAGCCAGTCCTCAGGTATTATTATTATTATTAAATTTCATTTTGTATCTTATCTGTTTGTAAATTTTTTTTAAAAAAAATGTTGAATATATTCCTTGGAATAACAGCAGGCACTGATGAAGAAGAAGTATGTGATGCTCCGGGTACCCCGCAGCATTAA ATGCTCGCCCTTACAAATCCGAAGGTACAGAGCATTCGTGAAGAGGTATTTTCGATGGCGGATCAAAATCTCACGGCGGAAAGCGAATCGCTTACGGACCTGAAAAGCACTACGACCGAGATAAATGGGCCGTCGGATGACGAAGACACGTCGATCGGGAACAGCGGAATCGTCGGCGAAGGGCATCTTGAAGAATTGTCCAGCGGTGAGGTGATTTCAAAGAAAAAGAGAAGAGGAAGGCCGAGGAGAAAAGCATCCATCGACCTGGAGAAGCCATCATCGCCGTCATCGCAGGGGAGCCTCTCGTCGTCCGCCAATTCACGAAACACTTCGAAACGCCGCCTTGGGCGGCCGCCTGGTAGTGATGGTTTTGCTTGGGACACTGCCGGCGGAAGTTTTACCCCCCACATCCTCCATATTCCAAAAGGAGAGGATATTGTGAAGGGTCTATCAAGATTCTCAAAGAAAGGTCCTCGAGCAATCTGCATAATTTCTGCTGTTGGTTCAGTTTCGAGCGTTCATCTCCGCCAAGTTGATGCGAAGCCCAACACCACACAGAAATTCCAGGGAATGTTTGAGATTCTGCGCATAACAGGGTCGTTTGTGGGACAAATGAACGGTAAACGCACTAAAGTGGGACAGGTTTCCATTTCACTCGCTCATCCTGACGGGCGAGTTTTTGGGGGCGTCGTTGCTTCTGCACTAATAGCAGCCACCCCCATTCAGATTGTTGTGGCAAGCTTTAAGCAAAAAATTAGCCCTGCAGTTAAAAGGATGCACACACCAGCTCACAACAGCCAGTCCTCAGCAGGCACTGATGAAGAAGAAGTATGTGATGCTCCGGGTACCCCGCAGCATTAA ATGCTCGCCCTTACAAATCCGAAGGTACAGAGCATTCGTGAAGAGGTATTTTCGATGGCGGATCAAAATCTCACGGCGGAAAGCGAATCGCTTACGGACCTGAAAAGCACTACGACCGAGATAAATGGGCCGTCGGATGACGAAGACACGTCGATCGGGAACAGCGGAATCGTCGGCGAAGGGCATCTTGAAGAATTGTCCAGCGGTGAGGTGATTTCAAAGAAAAAGAGAAGAGGAAGGCCGAGGAGAAAAGCATCCATCGACCTGGAGAAGCCATCATCGCCGTCATCGCAGGGGAGCCTCTCGTCGTCCGCCAATTCACGAAACACTTCGAAACGCCGCCTTGGGCGGCCGCCTGGTAGTGATGGTTTTGCTTGGGACACTGCCGGCGGAAGTTTTACCCCCCACATCCTCCATATTCCAAAAGGAGAGGATATTGTGAAGGGTCTATCAAGATTCTCAAAGAAAGGTCCTCGAGCAATCTGCATAATTTCTGCTGTTGGTTCAGTTTCGAGCGTTCATCTCCGCCAAGTTGATGCGAAGCCCAACACCACACAGAAATTCCAGGGAATGTTTGAGATTCTGCGCATAACAGGGTCGTTTGTGGGACAAATGAACGGTAAACGCACTAAAGTGGGACAGGTTTCCATTTCACTCGCTCATCCTGACGGGCGAGTTTTTGGGGGCGTCGTTGCTTCTGCACTAATAGCAGCCACCCCCATTCAGATTGTTGTGGCAAGCTTTAAGCAAAAAATTAGCCCTGCAGTTAAAAGGATGCACACACCAGCTCACAACAGCCAGTCCTCAGCAGGCACTGATGAAGAAGAAGTATGTGATGCTCCGGGTACCCCGCAGCATTAA MLALTNPKVQSIREEVFSMADQNLTAESESLTDLKSTTTEINGPSDDEDTSIGNSGIVGEGHLEELSSGEVISKKKRRGRPRRKASIDLEKPSSPSSQGSLSSSANSRNTSKRRLGRPPGSDGFAWDTAGGSFTPHILHIPKGEDIVKGLSRFSKKGPRAICIISAVGSVSSVHLRQVDAKPNTTQKFQGMFEILRITGSFVGQMNGKRTKVGQVSISLAHPDGRVFGGVVASALIAATPIQIVVASFKQKISPAVKRMHTPAHNSQSSAGTDEEEVCDAPGTPQH Homology
BLAST of Csor.00g221930.m01 vs. ExPASy Swiss-Prot
Match: O22812 (AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana OX=3702 GN=AHL10 PE=1 SV=2) HSP 1 Score: 127.9 bits (320), Expect = 1.9e-28 Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. ExPASy Swiss-Prot
Match: O80834 (AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana OX=3702 GN=AHL9 PE=2 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.2e-28 Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. ExPASy Swiss-Prot
Match: Q940I0 (AT-hook motif nuclear-localized protein 13 OS=Arabidopsis thaliana OX=3702 GN=AHL13 PE=1 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 5.4e-28 Identity = 90/227 (39.65%), Postives = 130/227 (57.27%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. ExPASy Swiss-Prot
Match: Q4V3E0 (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL7 PE=2 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.7e-27 Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. ExPASy Swiss-Prot
Match: O49658 (AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL2 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.3e-25 Identity = 83/228 (36.40%), Postives = 124/228 (54.39%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. NCBI nr
Match: KAG6606014.1 (AT-hook motif nuclear-localized protein 10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 543 bits (1399), Expect = 2.66e-194 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. NCBI nr
Match: KAG7035963.1 (AT-hook motif nuclear-localized protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 531 bits (1368), Expect = 2.45e-189 Identity = 285/301 (94.68%), Postives = 285/301 (94.68%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. NCBI nr
Match: XP_023533864.1 (AT-hook motif nuclear-localized protein 9-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 530 bits (1366), Expect = 2.85e-189 Identity = 279/286 (97.55%), Postives = 283/286 (98.95%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. NCBI nr
Match: XP_022958437.1 (AT-hook motif nuclear-localized protein 9-like [Cucurbita moschata]) HSP 1 Score: 525 bits (1352), Expect = 5.40e-187 Identity = 281/295 (95.25%), Postives = 283/295 (95.93%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. NCBI nr
Match: XP_023533862.1 (AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 523 bits (1346), Expect = 4.44e-186 Identity = 279/295 (94.58%), Postives = 283/295 (95.93%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. ExPASy TrEMBL
Match: A0A6J1H1U0 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111459658 PE=4 SV=1) HSP 1 Score: 525 bits (1352), Expect = 2.62e-187 Identity = 281/295 (95.25%), Postives = 283/295 (95.93%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. ExPASy TrEMBL
Match: A0A6J1K446 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111491516 PE=4 SV=1) HSP 1 Score: 506 bits (1303), Expect = 7.66e-180 Identity = 272/295 (92.20%), Postives = 277/295 (93.90%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. ExPASy TrEMBL
Match: A0A6J1K1C1 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111491516 PE=4 SV=1) HSP 1 Score: 500 bits (1287), Expect = 2.02e-177 Identity = 271/295 (91.86%), Postives = 276/295 (93.56%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. ExPASy TrEMBL
Match: A0A6J1CHK6 (AT-hook motif nuclear-localized protein OS=Momordica charantia OX=3673 GN=LOC111011241 PE=4 SV=1) HSP 1 Score: 174 bits (442), Expect = 4.56e-50 Identity = 100/198 (50.51%), Postives = 133/198 (67.17%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. ExPASy TrEMBL
Match: A0A6P3ZIR2 (AT-hook motif nuclear-localized protein OS=Ziziphus jujuba OX=326968 GN=LOC107410591 PE=4 SV=1) HSP 1 Score: 166 bits (420), Expect = 1.68e-45 Identity = 108/250 (43.20%), Postives = 154/250 (61.60%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. TAIR 10
Match: AT2G33620.1 (AT hook motif DNA-binding family protein ) HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29 Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. TAIR 10
Match: AT2G33620.2 (AT hook motif DNA-binding family protein ) HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29 Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. TAIR 10
Match: AT2G33620.3 (AT hook motif DNA-binding family protein ) HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29 Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. TAIR 10
Match: AT2G33620.4 (AT hook motif DNA-binding family protein ) HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29 Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 0
BLAST of Csor.00g221930.m01 vs. TAIR 10
Match: AT2G45850.1 (AT hook motif DNA-binding family protein ) HSP 1 Score: 126.7 bits (317), Expect = 3.0e-29 Identity = 82/215 (38.14%), Postives = 121/215 (56.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following terminal feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following internal feature(s) are a part of this mRNA:
The following initial feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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