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CmaCh04G017620.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATTCTAAATTTATACCTATTTAATTAATCTAGAAAATAACTATCTTTTCCTTGCTACCCCCACAATTATCTCTCACAAATGCGGTAGAAATTCCTATTGTCAAAAAAAGAGCAAAAGTGAATCCCAGCAAGAAGAACATCAAATTATGATCATTCACATTATATGGTGACACTAATACATAAAAATTTAATATAATTTCCAATCTAGTTATAAACATCATACATAGGAAATCCTACCCAATATTAAGGGAAAAGTTCAGATCAAAATAATCTTTTTAAAAAGTCCGAGTACTCTGTTGTTTCGCCTGACCAGACAATTCAGAAGAATCAATCAAAACAACGTTCAAGGAAAGGCTTCTTATTGTCCTACGTTTAATAGTTCAATCAACCATATATTCCTATCGCATAGTCTAAGATTCAATCATGGAAAGGCTTGAACATTGCATCAGATAATCGTATGTGAACCCATAAACGCTTAAATTATATCAAAAAGGTCTCCAGTAAGTTCAAACAGACAAAAATGAAAATTCACCAAGAACAAAAATCCCTATAACGAAGAGAAACTCAAACCTAAGCTGTAAGAACCACCGCGCCACCGGCCTCCTTAATCTTCTTCTCGGCGATCTTGGATACAAGCTTGGCCTTCACCACAATAGGCTGATTCTCCGGCAACACACCCTTGCCCAAAACCTTAAAATAACCGAACTGCGTGACATCGACCAATGGAACGTTGTCTTTGGAGGCCTTATCCTTCACTTCTTGAGGGATCAAGGACCAGATCTTGTCAACGTTGACAATCGGGCAATAGAACTTGTTGCGAAGCTTGTGGAAGTAACGCATACCGACTTTACCGAAATAACCAGGGTGATACTTATCGAAGAGAATACGATGGTGGTGCATACCTCCGGCGTTTCCCCGACCTCCAGGATGCTTTCGGTGCTTGCCGATTCTACCGTGACCGGCGCTCACATGTCCTCTCTTCTTCCTGTTCTTCTTGAATCGAGTCGTCATGGCTGA ATGGTTCAAACAGACAAAAATGAAAATTCACCAAGAACAAAAATCCCTATAACGAAGAGAAACTCAAACCTAAGCTGTAAGAACCACCGCGCCACCGGCCTCCTTAATCTTCTTCTCGGCGATCTTGGATACAAGCTTGGCCTTCACCACAATAGGCTGATTCTCCGGCAACACACCCTTGCCCAAAACCTTAAAATAACCGAACTGCGTGACATCGACCAATGGAACGTTGTCTTTGGAGGCCTTATCCTTCACTTCTTGAGGGATCAAGGACCAGATCTTGTCAACGTTGACAATCGGGCAATAGAACTTGTTGCGAAGCTTGTGGAAGTAACGCATACCGACTTTACCGAAATAACCAGGGTGATACTTATCGAAGAGAATACGATGGTGGTGCATACCTCCGGCGTTTCCCCGACCTCCAGGATGCTTTCGGTGCTTGCCGATTCTACCGTGACCGGCGCTCACATGTCCTCTCTTCTTCCTGTTCTTCTTGAATCGAGTCGTCATGGCTGA ATGGTTCAAACAGACAAAAATGAAAATTCACCAAGAACAAAAATCCCTATAACGAAGAGAAACTCAAACCTAAGCTGTAAGAACCACCGCGCCACCGGCCTCCTTAATCTTCTTCTCGGCGATCTTGGATACAAGCTTGGCCTTCACCACAATAGGCTGATTCTCCGGCAACACACCCTTGCCCAAAACCTTAAAATAACCGAACTGCGTGACATCGACCAATGGAACGTTGTCTTTGGAGGCCTTATCCTTCACTTCTTGAGGGATCAAGGACCAGATCTTGTCAACGTTGACAATCGGGCAATAGAACTTGTTGCGAAGCTTGTGGAAGTAACGCATACCGACTTTACCGAAATAACCAGGGTGATACTTATCGAAGAGAATACGATGGTGGTGCATACCTCCGGCGTTTCCCCGACCTCCAGGATGCTTTCGGTGCTTGCCGATTCTACCGTGACCGGCGCTCACATGTCCTCTCTTCTTCCTGTTCTTCTTGAATCGAGTCGTCATGGCTGA MVQTDKNENSPRTKIPITKRNSNLSCKNHRATGLLNLLLGDLGYKLGLHHNRLILRQHTLAQNLKITELRDIDQWNVVFGGLILHFLRDQGPDLVNVDNRAIELVAKLVEVTHTDFTEITRVILIEENTMVVHTSGVSPTSRMLSVLADSTVTGAHMSSLLPVLLESSRHG Homology
BLAST of CmaCh04G017620.1 vs. ExPASy Swiss-Prot
Match: P53143 (Putative uncharacterized protein YGL102C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YGL102C PE=5 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.5e-09 Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of CmaCh04G017620.1 vs. ExPASy TrEMBL
Match: W9RN37 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_027707 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 5.0e-40 Identity = 89/152 (58.55%), Postives = 123/152 (80.92%), Query Frame = 0
BLAST of CmaCh04G017620.1 vs. ExPASy TrEMBL
Match: A0A7N0U1I4 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 4.0e-37 Identity = 90/166 (54.22%), Postives = 121/166 (72.89%), Query Frame = 0
BLAST of CmaCh04G017620.1 vs. ExPASy TrEMBL
Match: A0A5D2GZF1 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A04G182500v1 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30 Identity = 76/151 (50.33%), Postives = 109/151 (72.19%), Query Frame = 0
BLAST of CmaCh04G017620.1 vs. ExPASy TrEMBL
Match: A0A7N0T5V7 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 4.7e-30 Identity = 77/157 (49.04%), Postives = 105/157 (66.88%), Query Frame = 0
BLAST of CmaCh04G017620.1 vs. ExPASy TrEMBL
Match: A0A498HES5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037293 PE=3 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 3.9e-24 Identity = 68/130 (52.31%), Postives = 94/130 (72.31%), Query Frame = 0
BLAST of CmaCh04G017620.1 vs. NCBI nr
Match: EXB82531.1 (hypothetical protein L484_027707 [Morus notabilis]) HSP 1 Score: 174.1 bits (440), Expect = 1.0e-39 Identity = 89/152 (58.55%), Postives = 123/152 (80.92%), Query Frame = 0
BLAST of CmaCh04G017620.1 vs. NCBI nr
Match: KAG4163103.1 (hypothetical protein ERO13_D01G150701v2 [Gossypium hirsutum]) HSP 1 Score: 146.7 bits (369), Expect = 1.8e-31 Identity = 79/151 (52.32%), Postives = 112/151 (74.17%), Query Frame = 0
BLAST of CmaCh04G017620.1 vs. NCBI nr
Match: KAG8500153.1 (hypothetical protein CXB51_004461 [Gossypium anomalum]) HSP 1 Score: 142.5 bits (358), Expect = 3.3e-30 Identity = 76/151 (50.33%), Postives = 110/151 (72.85%), Query Frame = 0
BLAST of CmaCh04G017620.1 vs. NCBI nr
Match: TYH23088.1 (hypothetical protein ES288_A04G182500v1 [Gossypium darwinii]) HSP 1 Score: 141.4 bits (355), Expect = 7.5e-30 Identity = 76/151 (50.33%), Postives = 109/151 (72.19%), Query Frame = 0
BLAST of CmaCh04G017620.1 vs. NCBI nr
Match: RXH69509.1 (hypothetical protein DVH24_037293 [Malus domestica]) HSP 1 Score: 121.3 bits (303), Expect = 8.0e-24 Identity = 68/130 (52.31%), Postives = 94/130 (72.31%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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