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Sed0020787 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTATTTAATACCCTTTCAGCAACGTGAAAGCTCAAACCACTGTCCACTATCTCCATTCCCCCACAGTGAAGTGGATCAAGTTGCCTTTACTCTTTCTCAGTGAGAGAAATGGGCGCGTATGAAGTGATTTTGGTGGCTCTATTGGCTGCGTGCGTGAATTTGTGGGGCGTGAGTGGGGCGGGGAAGGCTGCGGCCCCAGCAGTGGACTGCTCGAGCCTGATCCTGAGCATGGCGGACTGCCTGTCGTTCGTGTCGAACGACAGCACGACAAGCAGGCCGGAAGGGTCGTGCTGCACGGGGCTGAAGACCGTGCTGAAGGCCGACGCGGACTGCCTGTGCCAGGCCTTCAAGAACAGCGCTCAGCTCGGCGTCGTCCTTAACGTCACCAAGGCCCTCTCTCTCCCCGCTGCTTGCAAGGTCTCCGCCCCTGCGGCTGCTAACTGTAAACGTATGACCCGGCCCCCACCTTACCTACTTACTTCCCTCTTCTTTCCTTTTCATTTTATGCTACAATCTCAACTTCCTTCCTTTTGCTCTCTGCAGTGTCCTCCATCTCTCCTGCTGCCTCTCCTGGTACACCCTTTCTTCCCTTAATTACTCTACTTTATTCATTTCCGATCTCCATTTTTCATACGGGATTTTACAAAAATAATATTATAAATCACATTTTGGGTAAATTATGAGTTGGCCCCCATGATTCTAGAATTTTGACTCTACGGTTTCAAAAAAAAAAAGATAAGAGTTGAAAATTTAGTCCAAATGATTTTAAAACCTAAAATATTTAGTACAAAAATGTAACTTGAGACGAAATTTATAATTTACCTTAACATTTTTTTTAAAAAAAAGAGATAATTACATATGTAGTAGAAAAATGGAATGTGCCAATCGAATGGGTCAATGAGTTTCATTGTTTAGTTGTAAACCATCGTGTCGCAGGTTTGAGTCCGGGAATTAGTATTTGCCCCCCCGACCCCAATATGTACTCGCTTCAATCAATTTTGGGCTAATAACTTTAAAAATTTGCTATGCATTTACTGAGAGTCGATGTCGCACTTGATTATCTTATTTGATGTTATTCTATTTCAACGTCACAGGTTCTTGAGTTAGAGTAATTGTACATCCTATGTAGGATTTGTTGGCTCTACTTCTCCCGATTTAGTATGCATCTAATATTTTACCAAAAAAAGGAAAATTATAATTAAACTGGAATACACTGAGAGTAAATTCTCTTTATAAAATTGTACGTACTGTTGTGGTGTAGTGGTTACGCCGATGGCGTCGCCCGAGTCCTCGGTGGCATCTGCGCCAGCGACAAGTCAGCAGGTGCCGGCTCCAGCACCTGGAAAGTCAGCGGCCACAGGCGTTTTGCTGCCACTTGGATCCATAATCGCCGCCATTGGACTCGCTGTGTTCTGCACTTTCTGAACCATGGATGACACTTTGGGGCAGAATTTTTAAAATGAATGTTTTTACTGTTTATTTCCGGAAAGGCTTATTTGTTGGCACTGTTTTATTTTCTTCTTTATTTTCTGTGTATGTGTAATTTGTGGTATGTGATTTCAAGTAGTTTATAATATTCATTTTTTACCCCTCAAA GGTTATTTAATACCCTTTCAGCAACGTGAAAGCTCAAACCACTGTCCACTATCTCCATTCCCCCACAGTGAAGTGGATCAAGTTGCCTTTACTCTTTCTCAGTGAGAGAAATGGGCGCGTATGAAGTGATTTTGGTGGCTCTATTGGCTGCGTGCGTGAATTTGTGGGGCGTGAGTGGGGCGGGGAAGGCTGCGGCCCCAGCAGTGGACTGCTCGAGCCTGATCCTGAGCATGGCGGACTGCCTGTCGTTCGTGTCGAACGACAGCACGACAAGCAGGCCGGAAGGGTCGTGCTGCACGGGGCTGAAGACCGTGCTGAAGGCCGACGCGGACTGCCTGTGCCAGGCCTTCAAGAACAGCGCTCAGCTCGGCGTCGTCCTTAACGTCACCAAGGCCCTCTCTCTCCCCGCTGCTTGCAAGGTCTCCGCCCCTGCGGCTGCTAACTGTAAACTGTCCTCCATCTCTCCTGCTGCCTCTCCTGTGGTTACGCCGATGGCGTCGCCCGAGTCCTCGGTGGCATCTGCGCCAGCGACAAGTCAGCAGGTGCCGGCTCCAGCACCTGGAAAGTCAGCGGCCACAGGCGTTTTGCTGCCACTTGGATCCATAATCGCCGCCATTGGACTCGCTGTGTTCTGCACTTTCTGAACCATGGATGACACTTTGGGGCAGAATTTTTAAAATGAATGTTTTTACTGTTTATTTCCGGAAAGGCTTATTTGTTGGCACTGTTTTATTTTCTTCTTTATTTTCTGTGTATGTGTAATTTGTGGTATGTGATTTCAAGTAGTTTATAATATTCATTTTTTACCCCTCAAA ATGGGCGCGTATGAAGTGATTTTGGTGGCTCTATTGGCTGCGTGCGTGAATTTGTGGGGCGTGAGTGGGGCGGGGAAGGCTGCGGCCCCAGCAGTGGACTGCTCGAGCCTGATCCTGAGCATGGCGGACTGCCTGTCGTTCGTGTCGAACGACAGCACGACAAGCAGGCCGGAAGGGTCGTGCTGCACGGGGCTGAAGACCGTGCTGAAGGCCGACGCGGACTGCCTGTGCCAGGCCTTCAAGAACAGCGCTCAGCTCGGCGTCGTCCTTAACGTCACCAAGGCCCTCTCTCTCCCCGCTGCTTGCAAGGTCTCCGCCCCTGCGGCTGCTAACTGTAAACTGTCCTCCATCTCTCCTGCTGCCTCTCCTGTGGTTACGCCGATGGCGTCGCCCGAGTCCTCGGTGGCATCTGCGCCAGCGACAAGTCAGCAGGTGCCGGCTCCAGCACCTGGAAAGTCAGCGGCCACAGGCGTTTTGCTGCCACTTGGATCCATAATCGCCGCCATTGGACTCGCTGTGTTCTGCACTTTCTGA MGAYEVILVALLAACVNLWGVSGAGKAAAPAVDCSSLILSMADCLSFVSNDSTTSRPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSSISPAASPVVTPMASPESSVASAPATSQQVPAPAPGKSAATGVLLPLGSIIAAIGLAVFCTF Homology
BLAST of Sed0020787 vs. NCBI nr
Match: XP_022141909.1 (non-specific lipid-transfer protein-like protein At5g64080 [Momordica charantia]) HSP 1 Score: 220.7 bits (561), Expect = 1.0e-53 Identity = 128/175 (73.14%), Postives = 144/175 (82.29%), Query Frame = 0
BLAST of Sed0020787 vs. NCBI nr
Match: XP_038888277.1 (non-specific lipid transfer protein GPI-anchored 31 [Benincasa hispida]) HSP 1 Score: 218.0 bits (554), Expect = 6.5e-53 Identity = 124/169 (73.37%), Postives = 143/169 (84.62%), Query Frame = 0
BLAST of Sed0020787 vs. NCBI nr
Match: XP_023553599.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.5 bits (545), Expect = 7.2e-52 Identity = 122/170 (71.76%), Postives = 141/170 (82.94%), Query Frame = 0
BLAST of Sed0020787 vs. NCBI nr
Match: XP_022963887.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] >KAG7011413.1 Non-specific lipid-transfer protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214.5 bits (545), Expect = 7.2e-52 Identity = 122/170 (71.76%), Postives = 140/170 (82.35%), Query Frame = 0
BLAST of Sed0020787 vs. NCBI nr
Match: KAG6571687.1 (Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 213.4 bits (542), Expect = 1.6e-51 Identity = 121/170 (71.18%), Postives = 140/170 (82.35%), Query Frame = 0
BLAST of Sed0020787 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.7e-27 Identity = 78/170 (45.88%), Postives = 115/170 (67.65%), Query Frame = 0
BLAST of Sed0020787 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.0e-25 Identity = 73/143 (51.05%), Postives = 96/143 (67.13%), Query Frame = 0
BLAST of Sed0020787 vs. ExPASy Swiss-Prot
Match: Q2PE60 (Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3702 GN=LTPG23 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.9e-15 Identity = 57/120 (47.50%), Postives = 76/120 (63.33%), Query Frame = 0
BLAST of Sed0020787 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.1e-13 Identity = 56/161 (34.78%), Postives = 88/161 (54.66%), Query Frame = 0
BLAST of Sed0020787 vs. ExPASy Swiss-Prot
Match: Q6ASY2 (Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LTPL1 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 8.9e-13 Identity = 69/175 (39.43%), Postives = 93/175 (53.14%), Query Frame = 0
BLAST of Sed0020787 vs. ExPASy TrEMBL
Match: A0A6J1CK38 (non-specific lipid-transfer protein-like protein At5g64080 OS=Momordica charantia OX=3673 GN=LOC111012165 PE=3 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 4.8e-54 Identity = 128/175 (73.14%), Postives = 144/175 (82.29%), Query Frame = 0
BLAST of Sed0020787 vs. ExPASy TrEMBL
Match: A0A6J1HGE8 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita moschata OX=3662 GN=LOC111464062 PE=3 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 3.5e-52 Identity = 122/170 (71.76%), Postives = 140/170 (82.35%), Query Frame = 0
BLAST of Sed0020787 vs. ExPASy TrEMBL
Match: A0A5A7SQU3 (Non-specific lipid-transfer protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002610 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 2.3e-51 Identity = 115/156 (73.72%), Postives = 138/156 (88.46%), Query Frame = 0
BLAST of Sed0020787 vs. ExPASy TrEMBL
Match: A0A1S3C000 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucumis melo OX=3656 GN=LOC103495438 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 2.3e-51 Identity = 115/156 (73.72%), Postives = 138/156 (88.46%), Query Frame = 0
BLAST of Sed0020787 vs. ExPASy TrEMBL
Match: A0A6J1HSQ0 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima OX=3661 GN=LOC111467072 PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.8e-51 Identity = 120/170 (70.59%), Postives = 138/170 (81.18%), Query Frame = 0
BLAST of Sed0020787 vs. TAIR 10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28 Identity = 78/170 (45.88%), Postives = 115/170 (67.65%), Query Frame = 0
BLAST of Sed0020787 vs. TAIR 10
Match: AT5G64080.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 123.6 bits (309), Expect = 1.6e-28 Identity = 79/169 (46.75%), Postives = 115/169 (68.05%), Query Frame = 0
BLAST of Sed0020787 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 117.1 bits (292), Expect = 1.5e-26 Identity = 73/143 (51.05%), Postives = 96/143 (67.13%), Query Frame = 0
BLAST of Sed0020787 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25 Identity = 59/102 (57.84%), Postives = 79/102 (77.45%), Query Frame = 0
BLAST of Sed0020787 vs. TAIR 10
Match: AT1G36150.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16 Identity = 57/120 (47.50%), Postives = 76/120 (63.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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