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PI0028233 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAACAATCCTACAGATTTTTGTTTCCATTTTCACTTTAATCTTTGTTTTCTCTTCCTTCTTCCTCCATTTCCAGAGCTTTATCCAATTTATCCTCCGCTTCTTCTGCCTTCATCTACTGCTCGGAAGAATCTGTAAGCATTTTAGTACTTTTCACTGAATACGCAATTTTCTAATTCTTTTCTTTCGTTATTGGTTGATTGTTAGTAATGAATCCACTTCTTAACTGTTCGTTCTGAATATTTTCTGGATTTGGATGCGATTGATTTTTAAACTGTGTAGTGTGTTCCATTCGAGCTCGGTTAATTGAATGTCTGTTAAATTAATTAGTTCGACTCTGAAATTGAATGAAATTTGTTCAAGAATCGGATGATTTTTTTTTTTGTTCTGTAGGTTGTTATTATGCGAGTTTTTTAGTGAAGAGAAATGGAATCGAACTGGCTTGGTACGCTTTTGAATACGAAATTCTACACTTCTTGCGATCTGCATCCTAATCTCTGGCGAAATAAGAAAAGTGGATTCTGTATTGATTGTAGTGTTAGCTTCTGCAAGAATTGTACAATCCACGATCTTCATCGGCAGGTTAACATCTGGAAATATGTGTATCATGAAGTTGTGCGTGTTCAGGACATGGAGAAATACTTTTGCTGTTCAGAGATTCATGTATAATACATTCTTTCCCTTATTACAATTAACTGTAAGATATCGATTTAATCGTCTTTCGTAGAAAATATTCCTGAATTCAACCCTTTTGTTGCTGATCTTTTTGCTTTTATGTAGTTGAAATCATTGAGATTTGAGATACATATACTTTTTTTTTCGTAGTTTGTTAGAAAAATTTATCTGGTTTTTGAGCAATAGAAAACAATCGAATCGGAGATGATATTTTCTTGAGGAAATCTCACAAGCTTGATTTTGATTCTTACCAATTGAATGAATGAATGTACGATATTTGTTAATTCAATCCAGTTTTAGTAATAGGAATATAATAGAGTTTGTTTGTTATCTGTTAAATTTGCCTTTCTTCTATGGTATTCCATCTTTTTGCCTCATAACTTGAAGCCCCATTTTCTTGATTCTGCAGCCATATAAAGTAAATGGTAAACTAGCTGTTCATATAAACTCCCGTAGTCCTTGCGTGGACACCAAATCACCCAAGACGAAGTCCAGTAATCCTTGTGAAGAATGTGGCAGACATATACATGATCCTCACCGCTTCTGTTCAATCGCTTGCAAGGTATAGAAATATAAAAACCTTATCACAACTTTGTTAACTAAGATCATATTCTAAGCAATTTTAATGGTGTAAAAACATCAGGTTTCTGTGAACTCAAAGCTCAAGGACCAGAGTGTTGGAACCGTTGTATCTCCGAGCCAGGATTCTGGTAACTTATCGTTCAAGGACAACAAAACCAGCCCAGAAACAAATGTAAGTGAATTGGAATCAACCATATCAATTGCAGAGTCCATAGAAGAGACCAAAACTAGCCCTTCATCTTTACAACCAAGTAAACGAAGAGTAAAAAGCATCCCTCACAGAGCTCCATTTTTCTGATAAGATGAAGATGCAACATTTGCCATCTTCATTTTAACTTCCCTTGTGGCTTTCAAATGGTATGCCGCTTAATTTTTATTTACTTTGACTCATAATTCATAGAATGCCTAGCAGTGTAGTGAAATCGTCAATACAAAATTCATGATCAAAA GAACAATCCTACAGATTTTTGTTTCCATTTTCACTTTAATCTTTGTTTTCTCTTCCTTCTTCCTCCATTTCCAGAGCTTTATCCAATTTATCCTCCGCTTCTTCTGCCTTCATCTACTGCTCGGAAGAATCTGTTGTTATTATGCGAGTTTTTTAGTGAAGAGAAATGGAATCGAACTGGCTTGGTACGCTTTTGAATACGAAATTCTACACTTCTTGCGATCTGCATCCTAATCTCTGGCGAAATAAGAAAAGTGGATTCTGTATTGATTGTAGTGTTAGCTTCTGCAAGAATTGTACAATCCACGATCTTCATCGGCAGGTTAACATCTGGAAATATGTGTATCATGAAGTTGTGCGTGTTCAGGACATGGAGAAATACTTTTGCTGTTCAGAGATTCATCCATATAAAGTAAATGGTAAACTAGCTGTTCATATAAACTCCCGTAGTCCTTGCGTGGACACCAAATCACCCAAGACGAAGTCCAGTAATCCTTGTGAAGAATGTGGCAGACATATACATGATCCTCACCGCTTCTGTTCAATCGCTTGCAAGGTTTCTGTGAACTCAAAGCTCAAGGACCAGAGTGTTGGAACCGTTGTATCTCCGAGCCAGGATTCTGGTAACTTATCGTTCAAGGACAACAAAACCAGCCCAGAAACAAATGTAAGTGAATTGGAATCAACCATATCAATTGCAGAGTCCATAGAAGAGACCAAAACTAGCCCTTCATCTTTACAACCAAGTAAACGAAGAGTAAAAAGCATCCCTCACAGAGCTCCATTTTTCTGATAAGATGAAGATGCAACATTTGCCATCTTCATTTTAACTTCCCTTGTGGCTTTCAAATGGTATGCCGCTTAATTTTTATTTACTTTGACTCATAATTCATAGAATGCCTAGCAGTGTAGTGAAATCGTCAATACAAAATTCATGATCAAAA ATGGAATCGAACTGGCTTGGTACGCTTTTGAATACGAAATTCTACACTTCTTGCGATCTGCATCCTAATCTCTGGCGAAATAAGAAAAGTGGATTCTGTATTGATTGTAGTGTTAGCTTCTGCAAGAATTGTACAATCCACGATCTTCATCGGCAGGTTAACATCTGGAAATATGTGTATCATGAAGTTGTGCGTGTTCAGGACATGGAGAAATACTTTTGCTGTTCAGAGATTCATCCATATAAAGTAAATGGTAAACTAGCTGTTCATATAAACTCCCGTAGTCCTTGCGTGGACACCAAATCACCCAAGACGAAGTCCAGTAATCCTTGTGAAGAATGTGGCAGACATATACATGATCCTCACCGCTTCTGTTCAATCGCTTGCAAGGTTTCTGTGAACTCAAAGCTCAAGGACCAGAGTGTTGGAACCGTTGTATCTCCGAGCCAGGATTCTGGTAACTTATCGTTCAAGGACAACAAAACCAGCCCAGAAACAAATGTAAGTGAATTGGAATCAACCATATCAATTGCAGAGTCCATAGAAGAGACCAAAACTAGCCCTTCATCTTTACAACCAAGTAAACGAAGAGTAAAAAGCATCCCTCACAGAGCTCCATTTTTCTGA MESNWLGTLLNTKFYTSCDLHPNLWRNKKSGFCIDCSVSFCKNCTIHDLHRQVNIWKYVYHEVVRVQDMEKYFCCSEIHPYKVNGKLAVHINSRSPCVDTKSPKTKSSNPCEECGRHIHDPHRFCSIACKVSVNSKLKDQSVGTVVSPSQDSGNLSFKDNKTSPETNVSELESTISIAESIEETKTSPSSLQPSKRRVKSIPHRAPFF Homology
BLAST of PI0028233 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 5.7e-19 Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of PI0028233 vs. ExPASy TrEMBL
Match: A0A0A0KL89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G023890 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 4.9e-106 Identity = 191/208 (91.83%), Postives = 194/208 (93.27%), Query Frame = 0
BLAST of PI0028233 vs. ExPASy TrEMBL
Match: A0A6J1D096 (uncharacterized protein LOC111015876 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015876 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 2.1e-85 Identity = 154/208 (74.04%), Postives = 182/208 (87.50%), Query Frame = 0
BLAST of PI0028233 vs. ExPASy TrEMBL
Match: A0A6J1FR06 (uncharacterized protein LOC111447662 OS=Cucurbita moschata OX=3662 GN=LOC111447662 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83 Identity = 156/208 (75.00%), Postives = 176/208 (84.62%), Query Frame = 0
BLAST of PI0028233 vs. ExPASy TrEMBL
Match: A0A6J1K8W8 (uncharacterized protein LOC111491731 OS=Cucurbita maxima OX=3661 GN=LOC111491731 PE=4 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 5.8e-83 Identity = 155/208 (74.52%), Postives = 175/208 (84.13%), Query Frame = 0
BLAST of PI0028233 vs. ExPASy TrEMBL
Match: A0A6J1D0E9 (uncharacterized protein LOC111015876 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015876 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 1.9e-65 Identity = 130/208 (62.50%), Postives = 156/208 (75.00%), Query Frame = 0
BLAST of PI0028233 vs. NCBI nr
Match: XP_031741091.1 (uncharacterized protein LOC101214401 isoform X1 [Cucumis sativus]) HSP 1 Score: 393.7 bits (1010), Expect = 1.0e-105 Identity = 191/208 (91.83%), Postives = 194/208 (93.27%), Query Frame = 0
BLAST of PI0028233 vs. NCBI nr
Match: XP_038893018.1 (uncharacterized protein LOC120081909 [Benincasa hispida]) HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97 Identity = 180/208 (86.54%), Postives = 189/208 (90.87%), Query Frame = 0
BLAST of PI0028233 vs. NCBI nr
Match: XP_022146741.1 (uncharacterized protein LOC111015876 isoform X1 [Momordica charantia]) HSP 1 Score: 325.1 bits (832), Expect = 4.4e-85 Identity = 154/208 (74.04%), Postives = 182/208 (87.50%), Query Frame = 0
BLAST of PI0028233 vs. NCBI nr
Match: KAG6599925.1 (hypothetical protein SDJN03_05158, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 318.9 bits (816), Expect = 3.2e-83 Identity = 156/208 (75.00%), Postives = 176/208 (84.62%), Query Frame = 0
BLAST of PI0028233 vs. NCBI nr
Match: KAG7030608.1 (hypothetical protein SDJN02_04645 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 318.9 bits (816), Expect = 3.2e-83 Identity = 156/208 (75.00%), Postives = 176/208 (84.62%), Query Frame = 0
BLAST of PI0028233 vs. TAIR 10
Match: AT2G01818.1 (PLATZ transcription factor family protein ) HSP 1 Score: 134.8 bits (338), Expect = 7.9e-32 Identity = 88/224 (39.29%), Postives = 126/224 (56.25%), Query Frame = 0
BLAST of PI0028233 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein ) HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20 Identity = 65/227 (28.63%), Postives = 101/227 (44.49%), Query Frame = 0
BLAST of PI0028233 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein ) HSP 1 Score: 95.9 bits (237), Expect = 4.1e-20 Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of PI0028233 vs. TAIR 10
Match: AT5G46710.1 (PLATZ transcription factor family protein ) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19 Identity = 71/207 (34.30%), Postives = 101/207 (48.79%), Query Frame = 0
BLAST of PI0028233 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein ) HSP 1 Score: 93.2 bits (230), Expect = 2.6e-19 Identity = 65/208 (31.25%), Postives = 101/208 (48.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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