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PI0026890 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACAAACCCTTTCCACATTACGACGACCTATGCTACGCATTTGGAAGAGATCGTGCAACAGGAGGTCGCGCTGAAACCTTTGTCGATGTTGGGTCAAATGTGCCTGAAGGGTACGATGGATTCCCTGCTTATGACGGGAACAATATGGAACTCCCCACGATGTACAGTCAAGGACTGGACATGTCACATGACGACATAATTGGCACACGACCCGGTCGATTCTCTAAGGGTAGGGCTGGTTTGAGTGGTTCGAAGAGGAAACGGGGAGGGCAGGCATTCGAGACGGTGGAAATTATTTGCAGTACCATAGAATATGCAAATGACTAG ATGAACAAACCCTTTCCACATTACGACGACCTATGCTACGCATTTGGAAGAGATCGTGCAACAGGAGGTCGCGCTGAAACCTTTGTCGATGTTGGGTCAAATGTGCCTGAAGGGTACGATGGATTCCCTGCTTATGACGGGAACAATATGGAACTCCCCACGATGTACAGTCAAGGACTGGACATGTCACATGACGACATAATTGGCACACGACCCGGTCGATTCTCTAAGGGTAGGGCTGGTTTGAGTGGTTCGAAGAGGAAACGGGGAGGGCAGGCATTCGAGACGGTGGAAATTATTTGCAGTACCATAGAATATGCAAATGACTAG ATGAACAAACCCTTTCCACATTACGACGACCTATGCTACGCATTTGGAAGAGATCGTGCAACAGGAGGTCGCGCTGAAACCTTTGTCGATGTTGGGTCAAATGTGCCTGAAGGGTACGATGGATTCCCTGCTTATGACGGGAACAATATGGAACTCCCCACGATGTACAGTCAAGGACTGGACATGTCACATGACGACATAATTGGCACACGACCCGGTCGATTCTCTAAGGGTAGGGCTGGTTTGAGTGGTTCGAAGAGGAAACGGGGAGGGCAGGCATTCGAGACGGTGGAAATTATTTGCAGTACCATAGAATATGCAAATGACTAG MNKPFPHYDDLCYAFGRDRATGGRAETFVDVGSNVPEGYDGFPAYDGNNMELPTMYSQGLDMSHDDIIGTRPGRFSKGRAGLSGSKRKRGGQAFETVEIICSTIEYAND Homology
BLAST of PI0026890 vs. ExPASy TrEMBL
Match: A0A5A7UNI7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00630 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.6e-31 Identity = 69/109 (63.30%), Postives = 83/109 (76.15%), Query Frame = 0
BLAST of PI0026890 vs. ExPASy TrEMBL
Match: A0A5D3CX17 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold692G00870 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 7.9e-31 Identity = 69/110 (62.73%), Postives = 83/110 (75.45%), Query Frame = 0
BLAST of PI0026890 vs. ExPASy TrEMBL
Match: A0A5A7U9Q0 (Vacuolar protein sorting-associated protein 41-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G00440 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 2.0e-26 Identity = 63/109 (57.80%), Postives = 77/109 (70.64%), Query Frame = 0
BLAST of PI0026890 vs. ExPASy TrEMBL
Match: A0A5A7TZA5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1871G00090 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 5.9e-26 Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 0
BLAST of PI0026890 vs. ExPASy TrEMBL
Match: A0A5A7UWV7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00660 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.8e-25 Identity = 62/109 (56.88%), Postives = 74/109 (67.89%), Query Frame = 0
BLAST of PI0026890 vs. NCBI nr
Match: KAA0056167.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 145.2 bits (365), Expect = 3.3e-31 Identity = 69/109 (63.30%), Postives = 83/109 (76.15%), Query Frame = 0
BLAST of PI0026890 vs. NCBI nr
Match: KAA0061395.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK14749.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 142.9 bits (359), Expect = 1.6e-30 Identity = 69/110 (62.73%), Postives = 83/110 (75.45%), Query Frame = 0
BLAST of PI0026890 vs. NCBI nr
Match: KAA0052074.1 (vacuolar protein sorting-associated protein 41-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 128.3 bits (321), Expect = 4.2e-26 Identity = 63/109 (57.80%), Postives = 77/109 (70.64%), Query Frame = 0
BLAST of PI0026890 vs. NCBI nr
Match: KAA0048374.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK04074.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25 Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 0
BLAST of PI0026890 vs. NCBI nr
Match: KAA0054147.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 124.0 bits (310), Expect = 7.9e-25 Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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