Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGCAAAGAGGGGAGTCAACTGAAGATGCATCTAAGACATCGAGTTCAGATGGAGGCAAGAAGAAGATGCAATGCAAACGTGGATCGACAGAGATGTCGGAGATCACACGGGTTAGTAGTGATGGCCATAGGAGAGTCGTTGAGTATAACGAACTCGGACAACCTATTGGGGACAGTGCCATCAAGCTAAAAAATTTATTGGATGTACGGTGCGGTTCCATGTTCCCATTACGTACGATTCGTGGAAGCATGTACCAACGGATCTGAAGGATAAAATCTACGAACTGATCGAGGTATTACTTTACTTTTAAGTTATTAACTACATATGCCTAAATGTCGGCCTACTGTTAATTGTGTGATCCCATTCAATAGGGTGGGTTCGTAGTAGATCCAAGATCCAAGAAGAGCATCATACAAAATGCAAGTGTTTGCTTTCGGCAATTCAAGTCAGCACTCACCACTAAGTATGTACTACCGTTTAAAGATGACTTGGAGAAATTGAAAAGTCCCCCTACAAAGTACTCTTTCATCGAGCAGGAGCATTGGAACGCATTCGTTTCTCACAGATTGAGCAAAGAATTCGAGGTAACTACGATTACCAAAACATTGGAACATATATGTCCTTGCTTATGTTATATAAGACCTTATGTGTGACGCATGATGTAGGTGATTAGCAGTAAGGGCCGGGAGCGGCGGAAAAATAATAAATACAACCATAGGATGGCTCGAAAAGGTTATGCAAACCTTGTGGAGGAGATGGTAGGCCATTCAAGTACTTAG
mRNA sequence
ATGACGCAAAGAGGGGAGTCAACTGAAGATGCATCTAAGACATCGAGTTCAGATGGAGGCAAGAAGAAGATGCAATGCAAACGTGGATCGACAGAGATGTCGGAGATCACACGGGTTAGTAGTGATGGCCATAGGAGAGTCGTTGAGTATAACGAACTCGGACAACCTATTGGGGACAGTGCCATCAAGCTAAAAAATTTATTGGATGGTGGGTTCGTAGTAGATCCAAGATCCAAGAAGAGCATCATACAAAATGCAAGTGTTTGCTTTCGGCAATTCAAGTCAGCACTCACCACTAAGTATGTACTACCGTTTAAAGATGACTTGGAGAAATTGAAAAGTCCCCCTACAAAGTACTCTTTCATCGAGCAGGAGCATTGGAACGCATTCGTTTCTCACAGATTGAGCAAAGAATTCGAGGTGATTAGCAGTAAGGGCCGGGAGCGGCGGAAAAATAATAAATACAACCATAGGATGGCTCGAAAAGGTTATGCAAACCTTGTGGAGGAGATGGTAGGCCATTCAAGTACTTAG
Coding sequence (CDS)
ATGACGCAAAGAGGGGAGTCAACTGAAGATGCATCTAAGACATCGAGTTCAGATGGAGGCAAGAAGAAGATGCAATGCAAACGTGGATCGACAGAGATGTCGGAGATCACACGGGTTAGTAGTGATGGCCATAGGAGAGTCGTTGAGTATAACGAACTCGGACAACCTATTGGGGACAGTGCCATCAAGCTAAAAAATTTATTGGATGGTGGGTTCGTAGTAGATCCAAGATCCAAGAAGAGCATCATACAAAATGCAAGTGTTTGCTTTCGGCAATTCAAGTCAGCACTCACCACTAAGTATGTACTACCGTTTAAAGATGACTTGGAGAAATTGAAAAGTCCCCCTACAAAGTACTCTTTCATCGAGCAGGAGCATTGGAACGCATTCGTTTCTCACAGATTGAGCAAAGAATTCGAGGTGATTAGCAGTAAGGGCCGGGAGCGGCGGAAAAATAATAAATACAACCATAGGATGGCTCGAAAAGGTTATGCAAACCTTGTGGAGGAGATGGTAGGCCATTCAAGTACTTAG
Protein sequence
MTQRGESTEDASKTSSSDGGKKKMQCKRGSTEMSEITRVSSDGHRRVVEYNELGQPIGDSAIKLKNLLDGGFVVDPRSKKSIIQNASVCFRQFKSALTTKYVLPFKDDLEKLKSPPTKYSFIEQEHWNAFVSHRLSKEFEVISSKGRERRKNNKYNHRMARKGYANLVEEMVGHSST
Homology
BLAST of PI0024982 vs. ExPASy TrEMBL
Match:
A0A5A7TL30 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00860 PE=4 SV=1)
HSP 1 Score: 230.7 bits (587), Expect = 4.7e-57
Identity = 119/181 (65.75%), Postives = 143/181 (79.01%), Query Frame = 0
Query: 12 SKTSSSDGGKKKMQCKRGSTEMSEITRVSSDGHRRVVEYNELGQPIGDSAIKLKNLL--- 71
S S++G K + RG T MSEITRVS DGH+RVVEYNELGQPIG+SA KLK+ +
Sbjct: 531 SSVPSTEGVINKGKGTRGPTGMSEITRVSCDGHKRVVEYNELGQPIGESATKLKSFIGTT 590
Query: 72 -------------DGGFVVDPRSKKSIIQNASVCFRQFKSALTTKYVLPFKDDLEKLKSP 131
DGGFVVDPRSKKSI+QNASVCFR FKS+LTTK+VLP+K DLEKLK+P
Sbjct: 591 VRVHVPISYQSWKDGGFVVDPRSKKSILQNASVCFRNFKSSLTTKHVLPYKKDLEKLKNP 650
Query: 132 PTKYSFIEQEHWNAFVSHRLSKEFEVISSKGRERRKNNKYNHRMARKGYANLVEEMVGHS 177
PT+YSFI++EHWN FV+ RL+++FE++S+KGRERRKNNKYNHRM+RKGYANL EEM +
Sbjct: 651 PTEYSFIDREHWNIFVASRLTEQFEMVSNKGRERRKNNKYNHRMSRKGYANLTEEMKAST 710
BLAST of PI0024982 vs. ExPASy TrEMBL
Match:
A0A5A7TB20 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold555G00030 PE=4 SV=1)
HSP 1 Score: 228.4 bits (581), Expect = 2.3e-56
Identity = 120/195 (61.54%), Postives = 144/195 (73.85%), Query Frame = 0
Query: 12 SKTSSSDGGKKKMQCKRGSTEMSEITRVSSDGHRRVVEYNELGQPIGDSAIKLKN----- 71
S S++G K + RG TEMSEITRVS DGH+RVVEYNELGQPIG+SA KLK+
Sbjct: 14 SSVPSTEGVINKCKGTRGPTEMSEITRVSCDGHKRVVEYNELGQPIGESATKLKSFIGTT 73
Query: 72 -------------------------LLDGGFVVDPRSKKSIIQNASVCFRQFKSALTTKY 131
L++GGFVVDPRSKKSI+QNASVCFR FKS+LTTK+
Sbjct: 74 VRVHVPISYQSWKDVPTELKNKIYELIEGGFVVDPRSKKSILQNASVCFRNFKSSLTTKH 133
Query: 132 VLPFKDDLEKLKSPPTKYSFIEQEHWNAFVSHRLSKEFEVISSKGRERRKNNKYNHRMAR 177
VLP+K DLEKLK PPT+YSFI++EHWN FV+ RL+++FE++S+KGRERRKNNKYNHRM+R
Sbjct: 134 VLPYKKDLEKLKDPPTEYSFIDREHWNIFVASRLTEQFEMVSNKGRERRKNNKYNHRMSR 193
BLAST of PI0024982 vs. ExPASy TrEMBL
Match:
A0A5A7T2U8 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001300 PE=3 SV=1)
HSP 1 Score: 223.8 bits (569), Expect = 5.7e-55
Identity = 119/195 (61.03%), Postives = 142/195 (72.82%), Query Frame = 0
Query: 12 SKTSSSDGGKKKMQCKRGSTEMSEITRVSSDGHRRVVEYNELGQPIGDSAIKLKN----- 71
S S++G K + RG T MSEITRVS DGH+RVVEYNELGQPIG SA KLK+
Sbjct: 14 SSVPSTEGVINKGKDTRGPTGMSEITRVSCDGHKRVVEYNELGQPIGKSATKLKSFIGTT 73
Query: 72 -------------------------LLDGGFVVDPRSKKSIIQNASVCFRQFKSALTTKY 131
L++GGFVVDPRSKKSI+QNASVCFR FKS+LTTK+
Sbjct: 74 VRVHVPISYQSWKDVPTELKDKIYELIEGGFVVDPRSKKSILQNASVCFRNFKSSLTTKH 133
Query: 132 VLPFKDDLEKLKSPPTKYSFIEQEHWNAFVSHRLSKEFEVISSKGRERRKNNKYNHRMAR 177
VLP+K DLEKLK PPT+YSFI++EHWN FV+ RL+K+FE++S+KGRE+RKNNKYNHRM+R
Sbjct: 134 VLPYKKDLEKLKDPPTEYSFIDREHWNIFVASRLTKQFEMVSNKGREQRKNNKYNHRMSR 193
BLAST of PI0024982 vs. ExPASy TrEMBL
Match:
A0A5D3DL96 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001770 PE=3 SV=1)
HSP 1 Score: 222.6 bits (566), Expect = 1.3e-54
Identity = 118/195 (60.51%), Postives = 143/195 (73.33%), Query Frame = 0
Query: 12 SKTSSSDGGKKKMQCKRGSTEMSEITRVSSDGHRRVVEYNELGQPIGDSAIKLKN----- 71
S S++G K + RG TEMSEITRVS D H+RVVEYNELGQPIG+SA KLK+
Sbjct: 14 SSVPSTEGVINKGKGTRGPTEMSEITRVSCDEHKRVVEYNELGQPIGESATKLKSFIGTT 73
Query: 72 -------------------------LLDGGFVVDPRSKKSIIQNASVCFRQFKSALTTKY 131
L++GGFVVDPRSKKSI+QNASVCFR FKS+LTTK+
Sbjct: 74 VRVHVPISYQSWEDVPIELKDKIYELIEGGFVVDPRSKKSILQNASVCFRNFKSSLTTKH 133
Query: 132 VLPFKDDLEKLKSPPTKYSFIEQEHWNAFVSHRLSKEFEVISSKGRERRKNNKYNHRMAR 177
VLP+K DLEKLK PPT+YSFI++EHWN FV+ RL+++F+++S+KGRERRKNNKYNHRM+R
Sbjct: 134 VLPYKKDLEKLKDPPTEYSFIDREHWNIFVASRLTEQFKMVSNKGRERRKNNKYNHRMSR 193
BLAST of PI0024982 vs. ExPASy TrEMBL
Match:
A0A5A7TF26 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G001110 PE=3 SV=1)
HSP 1 Score: 222.6 bits (566), Expect = 1.3e-54
Identity = 118/195 (60.51%), Postives = 143/195 (73.33%), Query Frame = 0
Query: 12 SKTSSSDGGKKKMQCKRGSTEMSEITRVSSDGHRRVVEYNELGQPIGDSAIKLKN----- 71
S S++G K + RG TEMSEITRVS D H+RVVEYNELGQPIG+SA KLK+
Sbjct: 41 SSVPSTEGVINKGKGTRGPTEMSEITRVSCDEHKRVVEYNELGQPIGESATKLKSFIGTT 100
Query: 72 -------------------------LLDGGFVVDPRSKKSIIQNASVCFRQFKSALTTKY 131
L++GGFVVDPRSKKSI+QNASVCFR FKS+LTTK+
Sbjct: 101 VRVHVPISYQSWEDVPIELKDKIYELIEGGFVVDPRSKKSILQNASVCFRNFKSSLTTKH 160
Query: 132 VLPFKDDLEKLKSPPTKYSFIEQEHWNAFVSHRLSKEFEVISSKGRERRKNNKYNHRMAR 177
VLP+K DLEKLK PPT+YSFI++EHWN FV+ RL+++F+++S+KGRERRKNNKYNHRM+R
Sbjct: 161 VLPYKKDLEKLKDPPTEYSFIDREHWNIFVASRLTEQFKMVSNKGRERRKNNKYNHRMSR 220
BLAST of PI0024982 vs. NCBI nr
Match:
KAA0042291.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 230.7 bits (587), Expect = 9.7e-57
Identity = 119/181 (65.75%), Postives = 143/181 (79.01%), Query Frame = 0
Query: 12 SKTSSSDGGKKKMQCKRGSTEMSEITRVSSDGHRRVVEYNELGQPIGDSAIKLKNLL--- 71
S S++G K + RG T MSEITRVS DGH+RVVEYNELGQPIG+SA KLK+ +
Sbjct: 531 SSVPSTEGVINKGKGTRGPTGMSEITRVSCDGHKRVVEYNELGQPIGESATKLKSFIGTT 590
Query: 72 -------------DGGFVVDPRSKKSIIQNASVCFRQFKSALTTKYVLPFKDDLEKLKSP 131
DGGFVVDPRSKKSI+QNASVCFR FKS+LTTK+VLP+K DLEKLK+P
Sbjct: 591 VRVHVPISYQSWKDGGFVVDPRSKKSILQNASVCFRNFKSSLTTKHVLPYKKDLEKLKNP 650
Query: 132 PTKYSFIEQEHWNAFVSHRLSKEFEVISSKGRERRKNNKYNHRMARKGYANLVEEMVGHS 177
PT+YSFI++EHWN FV+ RL+++FE++S+KGRERRKNNKYNHRM+RKGYANL EEM +
Sbjct: 651 PTEYSFIDREHWNIFVASRLTEQFEMVSNKGRERRKNNKYNHRMSRKGYANLTEEMKAST 710
BLAST of PI0024982 vs. NCBI nr
Match:
KAA0040642.1 (uncharacterized protein E6C27_scaffold555G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 228.4 bits (581), Expect = 4.8e-56
Identity = 120/195 (61.54%), Postives = 144/195 (73.85%), Query Frame = 0
Query: 12 SKTSSSDGGKKKMQCKRGSTEMSEITRVSSDGHRRVVEYNELGQPIGDSAIKLKN----- 71
S S++G K + RG TEMSEITRVS DGH+RVVEYNELGQPIG+SA KLK+
Sbjct: 14 SSVPSTEGVINKCKGTRGPTEMSEITRVSCDGHKRVVEYNELGQPIGESATKLKSFIGTT 73
Query: 72 -------------------------LLDGGFVVDPRSKKSIIQNASVCFRQFKSALTTKY 131
L++GGFVVDPRSKKSI+QNASVCFR FKS+LTTK+
Sbjct: 74 VRVHVPISYQSWKDVPTELKNKIYELIEGGFVVDPRSKKSILQNASVCFRNFKSSLTTKH 133
Query: 132 VLPFKDDLEKLKSPPTKYSFIEQEHWNAFVSHRLSKEFEVISSKGRERRKNNKYNHRMAR 177
VLP+K DLEKLK PPT+YSFI++EHWN FV+ RL+++FE++S+KGRERRKNNKYNHRM+R
Sbjct: 134 VLPYKKDLEKLKDPPTEYSFIDREHWNIFVASRLTEQFEMVSNKGRERRKNNKYNHRMSR 193
BLAST of PI0024982 vs. NCBI nr
Match:
KAA0035941.1 (uncharacterized protein E6C27_scaffold56G001300 [Cucumis melo var. makuwa])
HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54
Identity = 119/195 (61.03%), Postives = 142/195 (72.82%), Query Frame = 0
Query: 12 SKTSSSDGGKKKMQCKRGSTEMSEITRVSSDGHRRVVEYNELGQPIGDSAIKLKN----- 71
S S++G K + RG T MSEITRVS DGH+RVVEYNELGQPIG SA KLK+
Sbjct: 14 SSVPSTEGVINKGKDTRGPTGMSEITRVSCDGHKRVVEYNELGQPIGKSATKLKSFIGTT 73
Query: 72 -------------------------LLDGGFVVDPRSKKSIIQNASVCFRQFKSALTTKY 131
L++GGFVVDPRSKKSI+QNASVCFR FKS+LTTK+
Sbjct: 74 VRVHVPISYQSWKDVPTELKDKIYELIEGGFVVDPRSKKSILQNASVCFRNFKSSLTTKH 133
Query: 132 VLPFKDDLEKLKSPPTKYSFIEQEHWNAFVSHRLSKEFEVISSKGRERRKNNKYNHRMAR 177
VLP+K DLEKLK PPT+YSFI++EHWN FV+ RL+K+FE++S+KGRE+RKNNKYNHRM+R
Sbjct: 134 VLPYKKDLEKLKDPPTEYSFIDREHWNIFVASRLTKQFEMVSNKGREQRKNNKYNHRMSR 193
BLAST of PI0024982 vs. NCBI nr
Match:
TYK24391.1 (uncharacterized protein E5676_scaffold205G001770 [Cucumis melo var. makuwa])
HSP 1 Score: 222.6 bits (566), Expect = 2.6e-54
Identity = 118/195 (60.51%), Postives = 143/195 (73.33%), Query Frame = 0
Query: 12 SKTSSSDGGKKKMQCKRGSTEMSEITRVSSDGHRRVVEYNELGQPIGDSAIKLKN----- 71
S S++G K + RG TEMSEITRVS D H+RVVEYNELGQPIG+SA KLK+
Sbjct: 14 SSVPSTEGVINKGKGTRGPTEMSEITRVSCDEHKRVVEYNELGQPIGESATKLKSFIGTT 73
Query: 72 -------------------------LLDGGFVVDPRSKKSIIQNASVCFRQFKSALTTKY 131
L++GGFVVDPRSKKSI+QNASVCFR FKS+LTTK+
Sbjct: 74 VRVHVPISYQSWEDVPIELKDKIYELIEGGFVVDPRSKKSILQNASVCFRNFKSSLTTKH 133
Query: 132 VLPFKDDLEKLKSPPTKYSFIEQEHWNAFVSHRLSKEFEVISSKGRERRKNNKYNHRMAR 177
VLP+K DLEKLK PPT+YSFI++EHWN FV+ RL+++F+++S+KGRERRKNNKYNHRM+R
Sbjct: 134 VLPYKKDLEKLKDPPTEYSFIDREHWNIFVASRLTEQFKMVSNKGRERRKNNKYNHRMSR 193
BLAST of PI0024982 vs. NCBI nr
Match:
KAA0041518.1 (uncharacterized protein E6C27_scaffold6G001110 [Cucumis melo var. makuwa])
HSP 1 Score: 222.6 bits (566), Expect = 2.6e-54
Identity = 118/195 (60.51%), Postives = 143/195 (73.33%), Query Frame = 0
Query: 12 SKTSSSDGGKKKMQCKRGSTEMSEITRVSSDGHRRVVEYNELGQPIGDSAIKLKN----- 71
S S++G K + RG TEMSEITRVS D H+RVVEYNELGQPIG+SA KLK+
Sbjct: 41 SSVPSTEGVINKGKGTRGPTEMSEITRVSCDEHKRVVEYNELGQPIGESATKLKSFIGTT 100
Query: 72 -------------------------LLDGGFVVDPRSKKSIIQNASVCFRQFKSALTTKY 131
L++GGFVVDPRSKKSI+QNASVCFR FKS+LTTK+
Sbjct: 101 VRVHVPISYQSWEDVPIELKDKIYELIEGGFVVDPRSKKSILQNASVCFRNFKSSLTTKH 160
Query: 132 VLPFKDDLEKLKSPPTKYSFIEQEHWNAFVSHRLSKEFEVISSKGRERRKNNKYNHRMAR 177
VLP+K DLEKLK PPT+YSFI++EHWN FV+ RL+++F+++S+KGRERRKNNKYNHRM+R
Sbjct: 161 VLPYKKDLEKLKDPPTEYSFIDREHWNIFVASRLTEQFKMVSNKGRERRKNNKYNHRMSR 220
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TL30 | 4.7e-57 | 65.75 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00860 PE... | [more] |
A0A5A7TB20 | 2.3e-56 | 61.54 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7T2U8 | 5.7e-55 | 61.03 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A5D3DL96 | 1.3e-54 | 60.51 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A5A7TF26 | 1.3e-54 | 60.51 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
Match Name | E-value | Identity | Description | |
KAA0042291.1 | 9.7e-57 | 65.75 | transposase [Cucumis melo var. makuwa] | [more] |
KAA0040642.1 | 4.8e-56 | 61.54 | uncharacterized protein E6C27_scaffold555G00030 [Cucumis melo var. makuwa] | [more] |
KAA0035941.1 | 1.2e-54 | 61.03 | uncharacterized protein E6C27_scaffold56G001300 [Cucumis melo var. makuwa] | [more] |
TYK24391.1 | 2.6e-54 | 60.51 | uncharacterized protein E5676_scaffold205G001770 [Cucumis melo var. makuwa] | [more] |
KAA0041518.1 | 2.6e-54 | 60.51 | uncharacterized protein E6C27_scaffold6G001110 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |