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PI0020985 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGGTGGAATTGTACCAGCCAGCGGCTGGAGGTCGAACAACGGGACGTTTAGACCCAGTTACCATAGTCATCTGCAGAAAATGATGGTCGAGAGGATGCCGGGACATAACATAACGGCTTCGACCATTGATTGTCGGATAAAGATGCTTAAAAGAGCGTTCCAAGCCATATCTGAAATGAGGGACCCATCGTGTAGTGGGTTCGGTTGGAACGATGAGCTCAAATGCATCATTGCCGAGAAAGACTTGTACGACAATTGGGTGAAGGTATGTTATTGATTATGTTCATTACTGTTCATTTCTAATAGTAAATTGACTAATTAGTTCCTGCAACACTTGTACAGAGTCATCTAGCCGCGAAGGGCCTCCTAAACAAACCTTTTCCCCATTACGACGACCTATGGTACGTCTTTGGAAGAGATCGTGCTACAGGAGGTCGTGGTGAAACCTTTGTCGATGCTGGGTTGAACATGTCTGCAGGGTACGATGGATTTCCCGCTTATGACGGGAACGATATGGAGTTCCCCACGATGTACAGTTAG ATGTCTGGTGGAATTGTACCAGCCAGCGGCTGGAGGTCGAACAACGGGACGTTTAGACCCAGTTACCATAGTCATCTGCAGAAAATGATGGTCGAGAGGATGCCGGGACATAACATAACGGCTTCGACCATTGATTGTCGGATAAAGATGCTTAAAAGAGCGTTCCAAGCCATATCTGAAATGAGGGACCCATCGTGTAGTGGGTTCGGTTGGAACGATGAGCTCAAATGCATCATTGCCGAGAAAGACTTGTACGACAATTGGGTGAAGAGTCATCTAGCCGCGAAGGGCCTCCTAAACAAACCTTTTCCCCATTACGACGACCTATGGTACGTCTTTGGAAGAGATCGTGCTACAGGAGGTCGTGGTGAAACCTTTGTCGATGCTGGGTTGAACATGTCTGCAGGGTACGATGGATTTCCCGCTTATGACGGGAACGATATGGAGTTCCCCACGATGTACAGTTAG ATGTCTGGTGGAATTGTACCAGCCAGCGGCTGGAGGTCGAACAACGGGACGTTTAGACCCAGTTACCATAGTCATCTGCAGAAAATGATGGTCGAGAGGATGCCGGGACATAACATAACGGCTTCGACCATTGATTGTCGGATAAAGATGCTTAAAAGAGCGTTCCAAGCCATATCTGAAATGAGGGACCCATCGTGTAGTGGGTTCGGTTGGAACGATGAGCTCAAATGCATCATTGCCGAGAAAGACTTGTACGACAATTGGGTGAAGAGTCATCTAGCCGCGAAGGGCCTCCTAAACAAACCTTTTCCCCATTACGACGACCTATGGTACGTCTTTGGAAGAGATCGTGCTACAGGAGGTCGTGGTGAAACCTTTGTCGATGCTGGGTTGAACATGTCTGCAGGGTACGATGGATTTCCCGCTTATGACGGGAACGATATGGAGTTCCCCACGATGTACAGTTAG MSGGIVPASGWRSNNGTFRPSYHSHLQKMMVERMPGHNITASTIDCRIKMLKRAFQAISEMRDPSCSGFGWNDELKCIIAEKDLYDNWVKSHLAAKGLLNKPFPHYDDLWYVFGRDRATGGRGETFVDAGLNMSAGYDGFPAYDGNDMEFPTMYS Homology
BLAST of PI0020985 vs. ExPASy TrEMBL
Match: A0A5A7VKT2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G001150 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 2.0e-51 Identity = 99/151 (65.56%), Postives = 119/151 (78.81%), Query Frame = 0
BLAST of PI0020985 vs. ExPASy TrEMBL
Match: A0A5A7VES2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002250 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.6e-51 Identity = 100/153 (65.36%), Postives = 119/153 (77.78%), Query Frame = 0
BLAST of PI0020985 vs. ExPASy TrEMBL
Match: A0A5D3CWL2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00640 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.4e-51 Identity = 99/153 (64.71%), Postives = 119/153 (77.78%), Query Frame = 0
BLAST of PI0020985 vs. ExPASy TrEMBL
Match: A0A5A7TRV1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold153G00290 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.4e-51 Identity = 99/153 (64.71%), Postives = 119/153 (77.78%), Query Frame = 0
BLAST of PI0020985 vs. ExPASy TrEMBL
Match: A0A5D3DCZ1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00020 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.4e-51 Identity = 99/153 (64.71%), Postives = 119/153 (77.78%), Query Frame = 0
BLAST of PI0020985 vs. NCBI nr
Match: XP_031743896.1 (uncharacterized protein LOC116404722 [Cucumis sativus] >XP_031743897.1 uncharacterized protein LOC116404722 [Cucumis sativus] >XP_031743898.1 uncharacterized protein LOC116404722 [Cucumis sativus]) HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52 Identity = 95/151 (62.91%), Postives = 120/151 (79.47%), Query Frame = 0
BLAST of PI0020985 vs. NCBI nr
Match: KAA0065929.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 211.8 bits (538), Expect = 4.1e-51 Identity = 99/151 (65.56%), Postives = 119/151 (78.81%), Query Frame = 0
BLAST of PI0020985 vs. NCBI nr
Match: KAA0066208.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 211.5 bits (537), Expect = 5.3e-51 Identity = 100/153 (65.36%), Postives = 119/153 (77.78%), Query Frame = 0
BLAST of PI0020985 vs. NCBI nr
Match: TYJ96194.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96764.1 retrotransposon protein [Cucumis melo var. makuwa] >TYJ97116.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK01046.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK12167.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 211.1 bits (536), Expect = 7.0e-51 Identity = 99/153 (64.71%), Postives = 119/153 (77.78%), Query Frame = 0
BLAST of PI0020985 vs. NCBI nr
Match: KAA0031555.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0036352.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0043921.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047622.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0049406.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 211.1 bits (536), Expect = 7.0e-51 Identity = 99/153 (64.71%), Postives = 119/153 (77.78%), Query Frame = 0
BLAST of PI0020985 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 2.0e-08 Identity = 33/111 (29.73%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of PI0020985 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 1.7e-07 Identity = 22/77 (28.57%), Postives = 42/77 (54.55%), Query Frame = 0
BLAST of PI0020985 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). ) HSP 1 Score: 53.5 bits (127), Expect = 1.7e-07 Identity = 22/77 (28.57%), Postives = 42/77 (54.55%), Query Frame = 0
BLAST of PI0020985 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 3.3e-06 Identity = 20/74 (27.03%), Postives = 42/74 (56.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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