Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAAAAAGAAGCTTAAATTGAAGTCTCATAAACAAATTAGAGAACCAAGCTTAGATGCACACTCTGGGTGCAATCAAAATGTTGGTGAGCAACAACTGATCTCAACATCCATCCATCACACAGAAAAGATCGATCTGGTAAATATTATGTTTAATTTAATTTTTTATATTGTTTTTCATGCTTTATTCGACATTGATGATAAATTAAGCATATGAATGTAATTTTTTAGGGGAGACCATGTAGTCTTGTTGTTGGAAAGGTTGATAACATTGTTACGGCAGGAACTGTTTTCAAAAGAATAAGTGTAGATAAAGTAGTTTATGAAGTACGACTTGGAGCGAATGATGTGCGGGTTCTCATTGATTTTTCAAGTGACACCCGTTTCCCACTACCCATACCGATTATTAATGGAAACATTTATTCTGTATACGATGCAATTGGTTCACATGTTTCATGGCTAAAACATCTTATTGTTATAGAAGAACAGAAAAAGGTAAAGTTTTAATTTCAAAATATGAGTTTTCACATTAGCATGTTTTCACTTTAATGTTCGACATTTTTTATAGACATCTAGCAGAAAATCTCGTGAGTTAGAATCTTTGAAAGGAACGAAAATGAAAATTAATTAA
mRNA sequence
ATGCCCAAAAAGAAGCTTAAATTGAAGTCTCATAAACAAATTAGAGAACCAAGCTTAGATGCACACTCTGGGTGCAATCAAAATGTTGGTGAGCAACAACTGATCTCAACATCCATCCATCACACAGAAAAGATCGATCTGGGGAGACCATGTAGTCTTGTTGTTGGAAAGGTTGATAACATTGTTACGGCAGGAACTGTTTTCAAAAGAATAAGTGTAGATAAAGTAGTTTATGAAGTACGACTTGGAGCGAATGATGTGCGGGTTCTCATTGATTTTTCAAGTGACACCCGTTTCCCACTACCCATACCGATTATTAATGGAAACATTTATTCTGTATACGATGCAATTGGTTCACATGTTTCATGGCTAAAACATCTTATTGTTATAGAAGAACAGAAAAAGACATCTAGCAGAAAATCTCGTGAGTTAGAATCTTTGAAAGGAACGAAAATGAAAATTAATTAA
Coding sequence (CDS)
ATGCCCAAAAAGAAGCTTAAATTGAAGTCTCATAAACAAATTAGAGAACCAAGCTTAGATGCACACTCTGGGTGCAATCAAAATGTTGGTGAGCAACAACTGATCTCAACATCCATCCATCACACAGAAAAGATCGATCTGGGGAGACCATGTAGTCTTGTTGTTGGAAAGGTTGATAACATTGTTACGGCAGGAACTGTTTTCAAAAGAATAAGTGTAGATAAAGTAGTTTATGAAGTACGACTTGGAGCGAATGATGTGCGGGTTCTCATTGATTTTTCAAGTGACACCCGTTTCCCACTACCCATACCGATTATTAATGGAAACATTTATTCTGTATACGATGCAATTGGTTCACATGTTTCATGGCTAAAACATCTTATTGTTATAGAAGAACAGAAAAAGACATCTAGCAGAAAATCTCGTGAGTTAGAATCTTTGAAAGGAACGAAAATGAAAATTAATTAA
Protein sequence
MPKKKLKLKSHKQIREPSLDAHSGCNQNVGEQQLISTSIHHTEKIDLGRPCSLVVGKVDNIVTAGTVFKRISVDKVVYEVRLGANDVRVLIDFSSDTRFPLPIPIINGNIYSVYDAIGSHVSWLKHLIVIEEQKKTSSRKSRELESLKGTKMKIN
Homology
BLAST of PI0013997 vs. ExPASy TrEMBL
Match:
A0A5A7SX35 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00040 PE=4 SV=1)
HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52
Identity = 112/153 (73.20%), Postives = 129/153 (84.31%), Query Frame = 0
Query: 3 KKKLKLKSHKQIREPSLDAHSGCNQNVGEQQLISTSIHHTEKIDLGRPCSLVVGKVDNIV 62
KKKLKLKS K+ RE SLDAHSGCNQN+ E+Q ISTSIHHTEKIDLG+PCSL VGKVDNIV
Sbjct: 17 KKKLKLKSLKRTRETSLDAHSGCNQNISEKQFISTSIHHTEKIDLGKPCSLAVGKVDNIV 76
Query: 63 TAGTVFKRISVDKVVYEVRLGANDVRVLIDFSSDTRFPLPIPIINGNIYSVYDAIGSHVS 122
GTVF+RIS D++VY VRLG DV VLI+ + D+ LPIPI+ G+IYSV+DAIG HV
Sbjct: 77 ATGTVFERISTDEIVYGVRLGEGDVLVLIELACDSHSLLPIPIV-GSIYSVHDAIGLHVP 136
Query: 123 WLKHLIVIEEQKKTSSRKSRELESLKGTKMKIN 156
W K+LIVIEEQKKTSS+KS ELE+LKGTK K+N
Sbjct: 137 WPKYLIVIEEQKKTSSKKSCELEALKGTKSKMN 168
BLAST of PI0013997 vs. ExPASy TrEMBL
Match:
A0A5D3CIW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00110 PE=4 SV=1)
HSP 1 Score: 212.2 bits (539), Expect = 1.5e-51
Identity = 110/155 (70.97%), Postives = 129/155 (83.23%), Query Frame = 0
Query: 1 MPKKKLKLKSHKQIREPSLDAHSGCNQNVGEQQLISTSIHHTEKIDLGRPCSLVVGKVDN 60
M KK LKLKS K+ RE SLDAHSGCNQN+ E+Q ISTSIHHT+KI+LGRPCSL VGKVDN
Sbjct: 221 MAKKMLKLKSLKRTRETSLDAHSGCNQNISEKQFISTSIHHTKKINLGRPCSLAVGKVDN 280
Query: 61 IVTAGTVFKRISVDKVVYEVRLGANDVRVLIDFSSDTRFPLPIPIINGNIYSVYDAIGSH 120
IV GTVF+RIS ++VY VRLG DVRVLI+ + D+ LPIPI+ +IYS++DAIGSH
Sbjct: 281 IVATGTVFERISTGEIVYGVRLGEGDVRVLIELACDSHSLLPIPIVE-SIYSIHDAIGSH 340
Query: 121 VSWLKHLIVIEEQKKTSSRKSRELESLKGTKMKIN 156
V W K+LIVIEEQK TSS+KSRELE+LKGTK K+N
Sbjct: 341 VPWPKYLIVIEEQKNTSSKKSRELEALKGTKSKMN 374
BLAST of PI0013997 vs. ExPASy TrEMBL
Match:
A0A5A7TFT2 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00050 PE=4 SV=1)
HSP 1 Score: 175.3 bits (443), Expect = 2.0e-40
Identity = 89/130 (68.46%), Postives = 106/130 (81.54%), Query Frame = 0
Query: 5 KLKLKSHKQIREPSLDAHSGCNQNVGEQQLISTSIHHTEKIDLGRPCSLVVGKVDNIVTA 64
K LKS K+ RE SLDAHSGCNQN+ E+Q IS S HHTEKIDLGRPCSL VGKVDNIV+
Sbjct: 667 KQTLKSLKRNRETSLDAHSGCNQNISEKQFISMSNHHTEKIDLGRPCSLAVGKVDNIVST 726
Query: 65 GTVFKRISVDKVVYEVRLGANDVRVLIDFSSDTRFPLPIPIINGNIYSVYDAIGSHVSWL 124
GTVF+RIS +++VY VRLG DVRVLI+ + D+ LPIP++ G+IY V+DAIGSHV W
Sbjct: 727 GTVFERISTNEIVYGVRLGEGDVRVLIELACDSHSLLPIPVV-GSIYFVHDAIGSHVPWP 786
Query: 125 KHLIVIEEQK 135
K+LIVIE+QK
Sbjct: 787 KYLIVIEKQK 795
BLAST of PI0013997 vs. ExPASy TrEMBL
Match:
A0A5A7UBK9 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00720 PE=4 SV=1)
HSP 1 Score: 168.7 bits (426), Expect = 1.9e-38
Identity = 94/155 (60.65%), Postives = 111/155 (71.61%), Query Frame = 0
Query: 1 MPKKKLKLKSHKQIREPSLDAHSGCNQNVGEQQLISTSIHHTEKIDLGRPCSLVVGKVDN 60
M KK LKLKS K+ RE SLDAHSGCNQN+ RPCSL +GKVDN
Sbjct: 316 MAKKMLKLKSLKRTRETSLDAHSGCNQNI------------------RRPCSLAIGKVDN 375
Query: 61 IVTAGTVFKRISVDKVVYEVRLGANDVRVLIDFSSDTRFPLPIPIINGNIYSVYDAIGSH 120
IV GTVF+RIS ++VY VRLG DV VLI+ + D+ LPIPI+ +IYS++DAIGSH
Sbjct: 376 IVATGTVFERISTGEIVYGVRLGEGDVGVLIELACDSHSLLPIPIVE-SIYSIHDAIGSH 435
Query: 121 VSWLKHLIVIEEQKKTSSRKSRELESLKGTKMKIN 156
V W K+LIVIEEQKKTSS+KS ELE+LKGTK K+N
Sbjct: 436 VPWPKYLIVIEEQKKTSSKKSHELEALKGTKSKMN 451
BLAST of PI0013997 vs. ExPASy TrEMBL
Match:
A0A5D3D5S7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00800 PE=4 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 2.7e-32
Identity = 76/108 (70.37%), Postives = 90/108 (83.33%), Query Frame = 0
Query: 48 GRPCSLVVGKVDNIVTAGTVFKRISVDKVVYEVRLGANDVRVLIDFSSDTRFPLPIPIIN 107
GRPCSL VGKVDNIV G VF+RIS +++VY VRLG DV V I+ + D+ LPIPI+
Sbjct: 107 GRPCSLAVGKVDNIVAIGIVFERISTNEIVYRVRLGEGDVWVFIELACDSHSLLPIPIV- 166
Query: 108 GNIYSVYDAIGSHVSWLKHLIVIEEQKKTSSRKSRELESLKGTKMKIN 156
GNIYSV+DAIGSHVSW K+LIVIEEQKKTSS+K RELE+LKGTK+K+N
Sbjct: 167 GNIYSVHDAIGSHVSWQKYLIVIEEQKKTSSKKPRELEALKGTKLKMN 213
BLAST of PI0013997 vs. NCBI nr
Match:
KAA0034021.1 (uncharacterized protein E6C27_scaffold65G00040 [Cucumis melo var. makuwa])
HSP 1 Score: 214.9 bits (546), Expect = 4.8e-52
Identity = 112/153 (73.20%), Postives = 129/153 (84.31%), Query Frame = 0
Query: 3 KKKLKLKSHKQIREPSLDAHSGCNQNVGEQQLISTSIHHTEKIDLGRPCSLVVGKVDNIV 62
KKKLKLKS K+ RE SLDAHSGCNQN+ E+Q ISTSIHHTEKIDLG+PCSL VGKVDNIV
Sbjct: 17 KKKLKLKSLKRTRETSLDAHSGCNQNISEKQFISTSIHHTEKIDLGKPCSLAVGKVDNIV 76
Query: 63 TAGTVFKRISVDKVVYEVRLGANDVRVLIDFSSDTRFPLPIPIINGNIYSVYDAIGSHVS 122
GTVF+RIS D++VY VRLG DV VLI+ + D+ LPIPI+ G+IYSV+DAIG HV
Sbjct: 77 ATGTVFERISTDEIVYGVRLGEGDVLVLIELACDSHSLLPIPIV-GSIYSVHDAIGLHVP 136
Query: 123 WLKHLIVIEEQKKTSSRKSRELESLKGTKMKIN 156
W K+LIVIEEQKKTSS+KS ELE+LKGTK K+N
Sbjct: 137 WPKYLIVIEEQKKTSSKKSCELEALKGTKSKMN 168
BLAST of PI0013997 vs. NCBI nr
Match:
TYK11863.1 (uncharacterized protein E5676_scaffold177G00110 [Cucumis melo var. makuwa])
HSP 1 Score: 212.2 bits (539), Expect = 3.1e-51
Identity = 110/155 (70.97%), Postives = 129/155 (83.23%), Query Frame = 0
Query: 1 MPKKKLKLKSHKQIREPSLDAHSGCNQNVGEQQLISTSIHHTEKIDLGRPCSLVVGKVDN 60
M KK LKLKS K+ RE SLDAHSGCNQN+ E+Q ISTSIHHT+KI+LGRPCSL VGKVDN
Sbjct: 221 MAKKMLKLKSLKRTRETSLDAHSGCNQNISEKQFISTSIHHTKKINLGRPCSLAVGKVDN 280
Query: 61 IVTAGTVFKRISVDKVVYEVRLGANDVRVLIDFSSDTRFPLPIPIINGNIYSVYDAIGSH 120
IV GTVF+RIS ++VY VRLG DVRVLI+ + D+ LPIPI+ +IYS++DAIGSH
Sbjct: 281 IVATGTVFERISTGEIVYGVRLGEGDVRVLIELACDSHSLLPIPIVE-SIYSIHDAIGSH 340
Query: 121 VSWLKHLIVIEEQKKTSSRKSRELESLKGTKMKIN 156
V W K+LIVIEEQK TSS+KSRELE+LKGTK K+N
Sbjct: 341 VPWPKYLIVIEEQKNTSSKKSRELEALKGTKSKMN 374
BLAST of PI0013997 vs. NCBI nr
Match:
KAA0040896.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 175.3 bits (443), Expect = 4.2e-40
Identity = 89/130 (68.46%), Postives = 106/130 (81.54%), Query Frame = 0
Query: 5 KLKLKSHKQIREPSLDAHSGCNQNVGEQQLISTSIHHTEKIDLGRPCSLVVGKVDNIVTA 64
K LKS K+ RE SLDAHSGCNQN+ E+Q IS S HHTEKIDLGRPCSL VGKVDNIV+
Sbjct: 667 KQTLKSLKRNRETSLDAHSGCNQNISEKQFISMSNHHTEKIDLGRPCSLAVGKVDNIVST 726
Query: 65 GTVFKRISVDKVVYEVRLGANDVRVLIDFSSDTRFPLPIPIINGNIYSVYDAIGSHVSWL 124
GTVF+RIS +++VY VRLG DVRVLI+ + D+ LPIP++ G+IY V+DAIGSHV W
Sbjct: 727 GTVFERISTNEIVYGVRLGEGDVRVLIELACDSHSLLPIPVV-GSIYFVHDAIGSHVPWP 786
Query: 125 KHLIVIEEQK 135
K+LIVIE+QK
Sbjct: 787 KYLIVIEKQK 795
BLAST of PI0013997 vs. NCBI nr
Match:
KAA0053273.1 (putative transposase [Cucumis melo var. makuwa])
HSP 1 Score: 168.7 bits (426), Expect = 4.0e-38
Identity = 94/155 (60.65%), Postives = 111/155 (71.61%), Query Frame = 0
Query: 1 MPKKKLKLKSHKQIREPSLDAHSGCNQNVGEQQLISTSIHHTEKIDLGRPCSLVVGKVDN 60
M KK LKLKS K+ RE SLDAHSGCNQN+ RPCSL +GKVDN
Sbjct: 316 MAKKMLKLKSLKRTRETSLDAHSGCNQNI------------------RRPCSLAIGKVDN 375
Query: 61 IVTAGTVFKRISVDKVVYEVRLGANDVRVLIDFSSDTRFPLPIPIINGNIYSVYDAIGSH 120
IV GTVF+RIS ++VY VRLG DV VLI+ + D+ LPIPI+ +IYS++DAIGSH
Sbjct: 376 IVATGTVFERISTGEIVYGVRLGEGDVGVLIELACDSHSLLPIPIVE-SIYSIHDAIGSH 435
Query: 121 VSWLKHLIVIEEQKKTSSRKSRELESLKGTKMKIN 156
V W K+LIVIEEQKKTSS+KS ELE+LKGTK K+N
Sbjct: 436 VPWPKYLIVIEEQKKTSSKKSHELEALKGTKSKMN 451
BLAST of PI0013997 vs. NCBI nr
Match:
TYK18876.1 (uncharacterized protein E5676_scaffold204G00800 [Cucumis melo var. makuwa])
HSP 1 Score: 148.3 bits (373), Expect = 5.5e-32
Identity = 76/108 (70.37%), Postives = 90/108 (83.33%), Query Frame = 0
Query: 48 GRPCSLVVGKVDNIVTAGTVFKRISVDKVVYEVRLGANDVRVLIDFSSDTRFPLPIPIIN 107
GRPCSL VGKVDNIV G VF+RIS +++VY VRLG DV V I+ + D+ LPIPI+
Sbjct: 107 GRPCSLAVGKVDNIVAIGIVFERISTNEIVYRVRLGEGDVWVFIELACDSHSLLPIPIV- 166
Query: 108 GNIYSVYDAIGSHVSWLKHLIVIEEQKKTSSRKSRELESLKGTKMKIN 156
GNIYSV+DAIGSHVSW K+LIVIEEQKKTSS+K RELE+LKGTK+K+N
Sbjct: 167 GNIYSVHDAIGSHVSWQKYLIVIEEQKKTSSKKPRELEALKGTKLKMN 213
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SX35 | 2.3e-52 | 73.20 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3CIW3 | 1.5e-51 | 70.97 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7TFT2 | 2.0e-40 | 68.46 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00050 PE... | [more] |
A0A5A7UBK9 | 1.9e-38 | 60.65 | Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102... | [more] |
A0A5D3D5S7 | 2.7e-32 | 70.37 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0034021.1 | 4.8e-52 | 73.20 | uncharacterized protein E6C27_scaffold65G00040 [Cucumis melo var. makuwa] | [more] |
TYK11863.1 | 3.1e-51 | 70.97 | uncharacterized protein E5676_scaffold177G00110 [Cucumis melo var. makuwa] | [more] |
KAA0040896.1 | 4.2e-40 | 68.46 | transposase [Cucumis melo var. makuwa] | [more] |
KAA0053273.1 | 4.0e-38 | 60.65 | putative transposase [Cucumis melo var. makuwa] | [more] |
TYK18876.1 | 5.5e-32 | 70.37 | uncharacterized protein E5676_scaffold204G00800 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |