
PI0013707 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAATGCGGTCCTTTGTCACTCGCCAGGTATGACCATGTAATACATGCTTATTATTATGCATAAGACCTTACCTGTATTAAACTAGAATTTCATGAATGTGTGGTTAAATTGAAAGGTTTAGTGGTGAACTTAGGAAAATGTCGCCACGTAGAGGTGCACGAAGGAGTGGTCAAGGGGGTAGAGGAGCGAGGCAGAACCAACCTGATGAGCAGCCTGTGGAACAAGCTGCCAACCCCGTTGCACCCATCACCCATGCGGATCTCACTATCATGTCAAATCAGTTGGAGAAAAGGTTTAGAGACATTAGCACAACACCAGCTAGCACAAACAGCCCCTACTCAAGCTCCAGCTGCACCACAAGACTTGCCGGATAAGCTATCAGCTAAGGCTAAGCATCTGCGAGATTTCAGAAAGTACAAACTGCAAAACTTTGATGGATCTCTGGAAGATCCCACCAAGGCGGAGCTGTGGTTATCTTTTGTGGAGACCATCTTCCGTTATATGAGGTGTCTTGAAAACCAAAAGGTGCAGTGCGCGGTGTTCCTGCTTAGAGAGAGAGGTGTTGTATGGTGGCAATCAACAGAGCTAATGCTTGGTGGAGATGTGAACCAGATTACTTGGGACCAGTTCAAGAAAAACTTTTACACCAAGTTTTTCTCTACTAGTCTAAAGGATGTCAAGCGTTAG ATGGCTAATGCGGTCCTTTGTCACTCGCCAGGTTTAGTGGTGAACTTAGGAAAATGTCGCCACGTAGAGGTGCACGAAGGAGTGGTCAAGGGGGTAGAGGAGCGAGGCAGAACCAACCTGATGAGCAGCCTGTGGAACAAGCTGCCAACCCCGTTGCACCCATCACCCATGCGGATCTCACTATCATGTCAAATCAGTTGGAGAAAAGGTTTAGAGACATTAGCACAACACCAGCTAGCACAAACAGCCCCTACTCAAGCTCCAGCTGCACCACAAGACTTGCCGGATAAGCTATCAGCTAAGGCTAAGCATCTGCGAGATTTCAGAAAGTACAAACTGCAAAACTTTGATGGATCTCTGGAAGATCCCACCAAGGCGGAGCTGTGGTTATCTTTTGTGGAGACCATCTTCCGTTATATGAGGTGTCTTGAAAACCAAAAGGTGCAGTGCGCGGTGTTCCTGCTTAGAGAGAGAGGTGTTGTATGGTGGCAATCAACAGAGCTAATGCTTGGTGGAGATGTGAACCAGATTACTTGGGACCAGTTCAAGAAAAACTTTTACACCAAGTTTTTCTCTACTAGTCTAAAGGATGTCAAGCGTTAG ATGGCTAATGCGGTCCTTTGTCACTCGCCAGGTTTAGTGGTGAACTTAGGAAAATGTCGCCACGTAGAGGTGCACGAAGGAGTGGTCAAGGGGGTAGAGGAGCGAGGCAGAACCAACCTGATGAGCAGCCTGTGGAACAAGCTGCCAACCCCGTTGCACCCATCACCCATGCGGATCTCACTATCATGTCAAATCAGTTGGAGAAAAGGTTTAGAGACATTAGCACAACACCAGCTAGCACAAACAGCCCCTACTCAAGCTCCAGCTGCACCACAAGACTTGCCGGATAAGCTATCAGCTAAGGCTAAGCATCTGCGAGATTTCAGAAAGTACAAACTGCAAAACTTTGATGGATCTCTGGAAGATCCCACCAAGGCGGAGCTGTGGTTATCTTTTGTGGAGACCATCTTCCGTTATATGAGGTGTCTTGAAAACCAAAAGGTGCAGTGCGCGGTGTTCCTGCTTAGAGAGAGAGGTGTTGTATGGTGGCAATCAACAGAGCTAATGCTTGGTGGAGATGTGAACCAGATTACTTGGGACCAGTTCAAGAAAAACTTTTACACCAAGTTTTTCTCTACTAGTCTAAAGGATGTCAAGCGTTAG MANAVLCHSPGLVVNLGKCRHVEVHEGVVKGVEERGRTNLMSSLWNKLPTPLHPSPMRISLSCQISWRKGLETLAQHQLAQTAPTQAPAAPQDLPDKLSAKAKHLRDFRKYKLQNFDGSLEDPTKAELWLSFVETIFRYMRCLENQKVQCAVFLLRERGVVWWQSTELMLGGDVNQITWDQFKKNFYTKFFSTSLKDVKR Homology
BLAST of PI0013707 vs. ExPASy TrEMBL
Match: A0A1S3C5M7 (uncharacterized protein LOC103496742 OS=Cucumis melo OX=3656 GN=LOC103496742 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 5.1e-44 Identity = 89/129 (68.99%), Postives = 103/129 (79.84%), Query Frame = 0
BLAST of PI0013707 vs. ExPASy TrEMBL
Match: A0A5D3BCD2 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00010 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 5.1e-44 Identity = 89/129 (68.99%), Postives = 103/129 (79.84%), Query Frame = 0
BLAST of PI0013707 vs. ExPASy TrEMBL
Match: E5GB72 (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 5.1e-44 Identity = 89/129 (68.99%), Postives = 103/129 (79.84%), Query Frame = 0
BLAST of PI0013707 vs. ExPASy TrEMBL
Match: A0A5A7TD13 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00740 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 6.7e-44 Identity = 85/118 (72.03%), Postives = 101/118 (85.59%), Query Frame = 0
BLAST of PI0013707 vs. ExPASy TrEMBL
Match: A0A5A7SQU8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00040 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 8.8e-44 Identity = 93/169 (55.03%), Postives = 114/169 (67.46%), Query Frame = 0
BLAST of PI0013707 vs. NCBI nr
Match: XP_008456947.1 (PREDICTED: uncharacterized protein LOC103496742 [Cucumis melo] >XP_008456948.1 PREDICTED: uncharacterized protein LOC103496742 [Cucumis melo] >ADN33714.1 ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo] >KAA0066978.1 gag protease polyprotein [Cucumis melo var. makuwa] >TYJ96787.1 gag protease polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 187.6 bits (475), Expect = 1.1e-43 Identity = 89/129 (68.99%), Postives = 103/129 (79.84%), Query Frame = 0
BLAST of PI0013707 vs. NCBI nr
Match: KAA0039169.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 187.2 bits (474), Expect = 1.4e-43 Identity = 85/118 (72.03%), Postives = 101/118 (85.59%), Query Frame = 0
BLAST of PI0013707 vs. NCBI nr
Match: KAA0031931.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 186.8 bits (473), Expect = 1.8e-43 Identity = 93/169 (55.03%), Postives = 114/169 (67.46%), Query Frame = 0
BLAST of PI0013707 vs. NCBI nr
Match: KAA0057633.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 186.0 bits (471), Expect = 3.1e-43 Identity = 84/118 (71.19%), Postives = 99/118 (83.90%), Query Frame = 0
BLAST of PI0013707 vs. NCBI nr
Match: KAA0035480.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 185.7 bits (470), Expect = 4.0e-43 Identity = 84/118 (71.19%), Postives = 100/118 (84.75%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|