Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAGAATATCAAAGCCTCACTCTCGATGAGACAGTTTCAAAAATCTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACCAGGAAATTTTACGAGTTTATTTTAGTGGACACAAAGTCTGTTGAAATTATTCATGTTCCTGACAAGAACGACCCTTCAAAGATCGCTTATTCCAAATTAAAAATTTTCAAAGCGATAAATCCAACTCATTGGAACCAAAGGATTTTTACAGAAAAATCCTTCTCAAAACCTTTCGTACCCCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCTTACAAAATAAATTTTCCGCTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAACAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTTAACACAGCTTCTTATCCACAATACAAGATGTTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATTAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCGAAACTTCTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTTCAAGCTCAAAATCAGCATCTTCCTCCATACAGGAAGATGAAAAATTGGCAAGCCCGGAATACGATCTAAATGATCTGTTTCTCGACTCACAGCCCATGTGA
mRNA sequence
ATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAGAATATCAAAGCCTCACTCTCGATGAGACAGTTTCAAAAATCTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACCAGGAAATTTTACGAGTTTATTTTAGTGGACACAAAGTCTGTTGAAATTATTCATGTTCCTGACAAGAACGACCCTTCAAAGATCGCTTATTCCAAATTAAAAATTTTCAAAGCGATAAATCCAACTCATTGGAACCAAAGGATTTTTACAGAAAAATCCTTCTCAAAACCTTTCGTACCCCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCTTACAAAATAAATTTTCCGCTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAACAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTTAACACAGCTTCTTATCCACAATACAAGATGTTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATTAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCGAAACTTCTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTTCAAGCTCAAAATCAGCATCTTCCTCCATACAGGAAGATGAAAAATTGGCAAGCCCGGAATACGATCTAAATGATCTGTTTCTCGACTCACAGCCCATGTGA
Coding sequence (CDS)
ATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAGAATATCAAAGCCTCACTCTCGATGAGACAGTTTCAAAAATCTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACCAGGAAATTTTACGAGTTTATTTTAGTGGACACAAAGTCTGTTGAAATTATTCATGTTCCTGACAAGAACGACCCTTCAAAGATCGCTTATTCCAAATTAAAAATTTTCAAAGCGATAAATCCAACTCATTGGAACCAAAGGATTTTTACAGAAAAATCCTTCTCAAAACCTTTCGTACCCCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCTTACAAAATAAATTTTCCGCTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAACAATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTTAACACAGCTTCTTATCCACAATACAAGATGTTAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATTAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGATCAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCGAAACTTCTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGCCTCTTCAAGCTCAAAATCAGCATCTTCCTCCATACAGGAAGATGAAAAATTGGCAAGCCCGGAATACGATCTAAATGATCTGTTTCTCGACTCACAGCCCATGTGA
Protein sequence
MDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSASSSIQEDEKLASPEYDLNDLFLDSQPM
Homology
BLAST of PI0003905 vs. ExPASy TrEMBL
Match:
A0A5A7SR64 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001720 PE=4 SV=1)
HSP 1 Score: 355.5 bits (911), Expect = 2.9e-94
Identity = 190/413 (46.00%), Postives = 263/413 (63.68%), Query Frame = 0
Query: 1 MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLES 60
MDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP S+ S
Sbjct: 8 MDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASPDASSSRS 67
Query: 61 STP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEG 120
+ P P++YSQ V P K F PRP I YF K I D IEPE+ ++ E S+IFP G
Sbjct: 68 AIPRNPSSYSQIVRP-KIFQPRPPINGYFTK-TTIVDLTIEPEFDGPSVQEVCSQIFPHG 127
Query: 121 FNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIF 180
FNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F
Sbjct: 128 FNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMF 187
Query: 181 TEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNF 240
+ FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF WW F
Sbjct: 188 VGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWFQNWWMYF 247
Query: 241 GLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK 300
GL+++I P IQ SY F ++I + + RF LYFQIPWIFCW+F +K L K
Sbjct: 248 GLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSK 307
Query: 301 NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDAD 360
+L IKWW+K+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA A+T +
Sbjct: 308 SLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGASTQQE 367
Query: 361 FQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY---DLNDLFLDSQP 401
F +++ V N ++ +S+ + + L Y D+ND FLD+QP
Sbjct: 368 FNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYVGLDINDPFLDTQP 418
BLAST of PI0003905 vs. ExPASy TrEMBL
Match:
A0A5D3DW87 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003410 PE=4 SV=1)
HSP 1 Score: 354.8 bits (909), Expect = 4.9e-94
Identity = 189/413 (45.76%), Postives = 263/413 (63.68%), Query Frame = 0
Query: 1 MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLES 60
MDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP S+ S
Sbjct: 8 MDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASPDASSSRS 67
Query: 61 STP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEG 120
+ P P++YSQ V P K F PRP I YF K + D IEPE+ ++ E S+IFP G
Sbjct: 68 AIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVCSQIFPHG 127
Query: 121 FNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIF 180
FNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F
Sbjct: 128 FNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMF 187
Query: 181 TEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNF 240
+ FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF WW F
Sbjct: 188 VGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWFQNWWMYF 247
Query: 241 GLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK 300
GL+++I P IQ SY F ++I + + RF LYFQIPWIFCW+F +K L K
Sbjct: 248 GLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSK 307
Query: 301 NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDAD 360
+L IKWW+K+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA A+T +
Sbjct: 308 SLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGASTQQE 367
Query: 361 FQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY---DLNDLFLDSQP 401
F +++ V N ++ +S+ + + L Y D+ND FLD+QP
Sbjct: 368 FNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYEGLDINDPFLDTQP 418
BLAST of PI0003905 vs. ExPASy TrEMBL
Match:
A0A5A7SS94 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003480 PE=4 SV=1)
HSP 1 Score: 352.8 bits (904), Expect = 1.9e-93
Identity = 188/413 (45.52%), Postives = 262/413 (63.44%), Query Frame = 0
Query: 1 MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLES 60
MDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP S+ S
Sbjct: 8 MDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASPDASSSRS 67
Query: 61 STP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEG 120
+ P P++YSQ V P K F PRP I YF + D IEPE+ ++ E S+IFP G
Sbjct: 68 AIPRNPSSYSQIVRP-KIFQPRPPINGYFTNTTMV-DLTIEPEFDGPSVQEVCSQIFPHG 127
Query: 121 FNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIF 180
FNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F
Sbjct: 128 FNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMF 187
Query: 181 TEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNF 240
+ FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF WW F
Sbjct: 188 VGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWFQNWWMYF 247
Query: 241 GLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK 300
GL+++I P IQ SY F ++I + + RF LYFQIPWIFCW+F +K L K
Sbjct: 248 GLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSK 307
Query: 301 NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDAD 360
+L+IKWW+K+N+ H + +K+WF N +LQD+ +++ FL K+ +++ LA A+T +
Sbjct: 308 SLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTTQEDEAFLLTKNAVMSTLAGASTQQE 367
Query: 361 FQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY---DLNDLFLDSQP 401
F +++ V N ++ +S+ + + L Y D+ND FLD+QP
Sbjct: 368 FNSVVNNVVVNLSDDNDDLPEDASLASVNDVDDLDYDPYEGLDINDPFLDTQP 418
BLAST of PI0003905 vs. ExPASy TrEMBL
Match:
A0A5A7V6D1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00540 PE=4 SV=1)
HSP 1 Score: 352.8 bits (904), Expect = 1.9e-93
Identity = 187/413 (45.28%), Postives = 262/413 (63.44%), Query Frame = 0
Query: 1 MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLES 60
MDL F V+R + S+ + ++SS+ PP PS L+RPSG T + ASP S+ S
Sbjct: 8 MDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASPAASSSRS 67
Query: 61 STP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEG 120
+ P P++YSQ V P K F PRP I YF K + D IEPE+ ++ E S+IFP G
Sbjct: 68 AIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVCSQIFPHG 127
Query: 121 FNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIF 180
FNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F
Sbjct: 128 FNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMF 187
Query: 181 TEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNF 240
+ FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF WW F
Sbjct: 188 VGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYF 247
Query: 241 GLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK 300
GL+++I P +Q SY F ++I + + RF LYFQIPWIFCW+F +K L K
Sbjct: 248 GLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSK 307
Query: 301 NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDAD 360
+L+IKWW+K+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA A+T +
Sbjct: 308 SLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGASTQQE 367
Query: 361 FQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY---DLNDLFLDSQP 401
F +++ V N + +S+ + Y D+ND FLD+QP
Sbjct: 368 FNSVVNNVVVNLSDDNDDLPEDVSPASVNNADDFDYDPYEGLDINDPFLDTQP 418
BLAST of PI0003905 vs. ExPASy TrEMBL
Match:
A0A5A7UVN1 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00580 PE=4 SV=1)
HSP 1 Score: 352.4 bits (903), Expect = 2.4e-93
Identity = 187/413 (45.28%), Postives = 265/413 (64.16%), Query Frame = 0
Query: 1 MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLES 60
MDL F V+R + S+ + ++SS+ PP PS L+RPSG T + ASP S+ S
Sbjct: 8 MDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASPAASSSRS 67
Query: 61 STP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEG 120
+ P P++YSQ V P K F PRP I YF K + D IEPE+ ++ E S+IFP G
Sbjct: 68 AIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVCSQIFPHG 127
Query: 121 FNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIF 180
FNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F
Sbjct: 128 FNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMF 187
Query: 181 TEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNF 240
+ FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF WW F
Sbjct: 188 VGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYF 247
Query: 241 GLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK 300
GL+++I P +Q SY F ++I + + RF LYFQIPWIFCW+F +K L K
Sbjct: 248 GLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSK 307
Query: 301 NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDAD 360
+L+IKWW+K+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA A+T +
Sbjct: 308 SLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGASTQQE 367
Query: 361 FQRLL-STAVNASSS--------SKSASSSIQEDEKLASPEYDLNDLFLDSQP 401
F ++ + VN S S ++ +++ + + D+ND FLD+QP
Sbjct: 368 FNSVVNNVVVNLSDDNDDLPEDVSPASVNNVDDFDYDPYEGLDINDPFLDTQP 418
BLAST of PI0003905 vs. NCBI nr
Match:
KAA0032923.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 355.5 bits (911), Expect = 5.9e-94
Identity = 190/413 (46.00%), Postives = 263/413 (63.68%), Query Frame = 0
Query: 1 MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLES 60
MDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP S+ S
Sbjct: 8 MDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASPDASSSRS 67
Query: 61 STP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEG 120
+ P P++YSQ V P K F PRP I YF K I D IEPE+ ++ E S+IFP G
Sbjct: 68 AIPRNPSSYSQIVRP-KIFQPRPPINGYFTK-TTIVDLTIEPEFDGPSVQEVCSQIFPHG 127
Query: 121 FNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIF 180
FNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F
Sbjct: 128 FNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMF 187
Query: 181 TEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNF 240
+ FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF WW F
Sbjct: 188 VGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWFQNWWMYF 247
Query: 241 GLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK 300
GL+++I P IQ SY F ++I + + RF LYFQIPWIFCW+F +K L K
Sbjct: 248 GLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSK 307
Query: 301 NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDAD 360
+L IKWW+K+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA A+T +
Sbjct: 308 SLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGASTQQE 367
Query: 361 FQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY---DLNDLFLDSQP 401
F +++ V N ++ +S+ + + L Y D+ND FLD+QP
Sbjct: 368 FNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYVGLDINDPFLDTQP 418
BLAST of PI0003905 vs. NCBI nr
Match:
TYK28077.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 354.8 bits (909), Expect = 1.0e-93
Identity = 189/413 (45.76%), Postives = 263/413 (63.68%), Query Frame = 0
Query: 1 MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLES 60
MDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP S+ S
Sbjct: 8 MDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASPDASSSRS 67
Query: 61 STP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEG 120
+ P P++YSQ V P K F PRP I YF K + D IEPE+ ++ E S+IFP G
Sbjct: 68 AIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVCSQIFPHG 127
Query: 121 FNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIF 180
FNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F
Sbjct: 128 FNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMF 187
Query: 181 TEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNF 240
+ FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF WW F
Sbjct: 188 VGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWFQNWWMYF 247
Query: 241 GLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK 300
GL+++I P IQ SY F ++I + + RF LYFQIPWIFCW+F +K L K
Sbjct: 248 GLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSK 307
Query: 301 NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDAD 360
+L IKWW+K+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA A+T +
Sbjct: 308 SLMIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGASTQQE 367
Query: 361 FQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY---DLNDLFLDSQP 401
F +++ V N ++ +S+ + + L Y D+ND FLD+QP
Sbjct: 368 FNSVVNNVVVNLSDDNDDLPEDASPASVNDVDDLDYDPYEGLDINDPFLDTQP 418
BLAST of PI0003905 vs. NCBI nr
Match:
KAA0063832.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 352.8 bits (904), Expect = 3.8e-93
Identity = 187/413 (45.28%), Postives = 262/413 (63.44%), Query Frame = 0
Query: 1 MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLES 60
MDL F V+R + S+ + ++SS+ PP PS L+RPSG T + ASP S+ S
Sbjct: 8 MDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASPAASSSRS 67
Query: 61 STP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEG 120
+ P P++YSQ V P K F PRP I YF K + D IEPE+ ++ E S+IFP G
Sbjct: 68 AIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVCSQIFPHG 127
Query: 121 FNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIF 180
FNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F
Sbjct: 128 FNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMF 187
Query: 181 TEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNF 240
+ FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF WW F
Sbjct: 188 VGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYF 247
Query: 241 GLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK 300
GL+++I P +Q SY F ++I + + RF LYFQIPWIFCW+F +K L K
Sbjct: 248 GLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSK 307
Query: 301 NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDAD 360
+L+IKWW+K+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA A+T +
Sbjct: 308 SLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGASTQQE 367
Query: 361 FQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY---DLNDLFLDSQP 401
F +++ V N + +S+ + Y D+ND FLD+QP
Sbjct: 368 FNSVVNNVVVNLSDDNDDLPEDVSPASVNNADDFDYDPYEGLDINDPFLDTQP 418
BLAST of PI0003905 vs. NCBI nr
Match:
KAA0032916.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK28084.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 352.8 bits (904), Expect = 3.8e-93
Identity = 188/413 (45.52%), Postives = 262/413 (63.44%), Query Frame = 0
Query: 1 MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLES 60
MDL F V+R + S+ + ++SS+ PP PS L+RPSG T ASP S+ S
Sbjct: 8 MDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTELLRPSGPTTSNMRAASPDASSSRS 67
Query: 61 STP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEG 120
+ P P++YSQ V P K F PRP I YF + D IEPE+ ++ E S+IFP G
Sbjct: 68 AIPRNPSSYSQIVRP-KIFQPRPPINGYFTNTTMV-DLTIEPEFDGPSVQEVCSQIFPHG 127
Query: 121 FNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIF 180
FNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F
Sbjct: 128 FNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMF 187
Query: 181 TEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNF 240
+ FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF WW F
Sbjct: 188 VGRKFSHPFKPPSYNYRDYTKAWYIVFWLHAYNHSWFVTFCKQAYKMHFPNWFQNWWMYF 247
Query: 241 GLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK 300
GL+++I P IQ SY F ++I + + RF LYFQIPWIFCW+F +K L K
Sbjct: 248 GLSEEIFPVEIQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSK 307
Query: 301 NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDAD 360
+L+IKWW+K+N+ H + +K+WF N +LQD+ +++ FL K+ +++ LA A+T +
Sbjct: 308 SLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTTQEDEAFLLTKNAVMSTLAGASTQQE 367
Query: 361 FQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY---DLNDLFLDSQP 401
F +++ V N ++ +S+ + + L Y D+ND FLD+QP
Sbjct: 368 FNSVVNNVVVNLSDDNDDLPEDASLASVNDVDDLDYDPYEGLDINDPFLDTQP 418
BLAST of PI0003905 vs. NCBI nr
Match:
KAA0056777.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >KAA0059218.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYJ97600.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK21092.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 352.4 bits (903), Expect = 5.0e-93
Identity = 187/413 (45.28%), Postives = 265/413 (64.16%), Query Frame = 0
Query: 1 MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLES 60
MDL F V+R + S+ + ++SS+ PP PS L+RPSG T + ASP S+ S
Sbjct: 8 MDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKRAASPAASSSRS 67
Query: 61 STP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVSKIFPEG 120
+ P P++YSQ V P K F PRP I YF K + D IEPE+ ++ E S+IFP G
Sbjct: 68 AIPRNPSSYSQIVRP-KIFQPRPPINGYFTKTTMV-DLTIEPEFDGPSVQEVCSQIFPHG 127
Query: 121 FNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIF 180
FNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F
Sbjct: 128 FNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMF 187
Query: 181 TEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNF 240
+ FS PF P SY+Y+DY KAW+ V W + NHSWF++FC+ AYK++FP WF WW F
Sbjct: 188 VGRKFSHPFKPPSYNYRDYTKAWYIVFWLQAYNHSWFVTFCKQAYKMHFPNWFQNWWMYF 247
Query: 241 GLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK 300
GL+++I P +Q SY F ++I + + RF LYFQIPWIFCW+F +K L K
Sbjct: 248 GLSEEIFPVEVQRSYHLFQQSIYSSPLSKTFRFALYFQIPWIFCWNFQLGPSGNFKALSK 307
Query: 301 NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDAD 360
+L+IKWW+K+N+ H + +K+WF N +LQD+ ++++ FL K+ +++ LA A+T +
Sbjct: 308 SLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLAGASTQQE 367
Query: 361 FQRLL-STAVNASSS--------SKSASSSIQEDEKLASPEYDLNDLFLDSQP 401
F ++ + VN S S ++ +++ + + D+ND FLD+QP
Sbjct: 368 FNSVVNNVVVNLSDDNDDLPEDVSPASVNNVDDFDYDPYEGLDINDPFLDTQP 418
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SR64 | 2.9e-94 | 46.00 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001720 PE... | [more] |
A0A5D3DW87 | 4.9e-94 | 45.76 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003410 P... | [more] |
A0A5A7SS94 | 1.9e-93 | 45.52 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A5A7V6D1 | 1.9e-93 | 45.28 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7UVN1 | 2.4e-93 | 45.28 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
Match Name | E-value | Identity | Description | |
KAA0032923.1 | 5.9e-94 | 46.00 | polyprotein [Cucumis melo var. makuwa] | [more] |
TYK28077.1 | 1.0e-93 | 45.76 | polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0063832.1 | 3.8e-93 | 45.28 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] | [more] |
KAA0032916.1 | 3.8e-93 | 45.52 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK28084.1 Retrotransp... | [more] |
KAA0056777.1 | 5.0e-93 | 45.28 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] >KAA0059218.1 Retrotran... | [more] |
Match Name | E-value | Identity | Description | |