Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGATCATCCACCTGTCTCAAATCCTTCTTCATCCTTTGATCACTCTGATTCTGATTCGAATGAAAGGGATAATGTTTGTCTGGCTACACTATTTCGTCGAGCTTATTTTTCAACATCCTTTAAAATTTCTAATGAGCGTGTGTCTCCGGTTGTTCATCCTTCCTCATCTAAACCATCATAATCTATTGATACTGAGACTATTTCTTTAGATATTGCTTCTGTTAACACATTTAGCCCTAAATCACCTTCTTTAATGAGAGAACAACCTGTTTCTTCTCAAGATGTGCATCCAAATTCTGCAGAATCTGATCCATTACCATCGACTGTTGAACCTAATATTCCTCCTTGTTCCACCTCTCAGGAAGTTCCTTCTGAGAAAGTTTCACCTCCTTTTATTCCAAATACTGAGTTTACCGGTTCTAATGAGCCTCCAGTTCCTTCTTTTTCCTCGTCTATCTCTCCTCCATGTCCTGGTCATGAAAATATTGTTCCTCTTCCTAAAAAACCCAAAGTTTCTTCCAAAAGACCAAGAGTAATAACTATCAAAGCTGGTCGAAAAAAGTTGCTCCTCAATATTCCATCTGTTCCCATTGATGGCATCTCTTTTCATCTTGAAGAGAATGTCCAAAGATGGAAATATGTTGTGTAA
mRNA sequence
ATGCATGATCATCCACCTGTCTCAAATCCTTCTTCATCCTTTGATCACTCTGATTCTGATTCGAATGAAAGGGATAATGTTTGTCTGGCTACACTATTTCGTCGAGCTTATTTTTCAACATCCTTTAAAATTTCTAATGAGCATATTGCTTCTGTTAACACATTTAGCCCTAAATCACCTTCTTTAATGAGAGAACAACCTGTTTCTTCTCAAGATGTGCATCCAAATTCTGCAGAATCTGATCCATTACCATCGACTGTTGAACCTAATATTCCTCCTTGTTCCACCTCTCAGGAAGTTCCTTCTGAGAAAGTTTCACCTCCTTTTATTCCAAATACTGAGTTTACCGGTTCTAATGAGCCTCCAGTTCCTTCTTTTTCCTCGTCTATCTCTCCTCCATGTCCTGGTCATGAAAATATTGTTCCTCTTCCTAAAAAACCCAAAGTTTCTTCCAAAAGACCAAGAGTAATAACTATCAAAGCTGGTCGAAAAAAGTTGCTCCTCAATATTCCATCTGTTCCCATTGATGGCATCTCTTTTCATCTTGAAGAGAATGTCCAAAGATGGAAATATGTTGTGTAA
Coding sequence (CDS)
ATGCATGATCATCCACCTGTCTCAAATCCTTCTTCATCCTTTGATCACTCTGATTCTGATTCGAATGAAAGGGATAATGTTTGTCTGGCTACACTATTTCGTCGAGCTTATTTTTCAACATCCTTTAAAATTTCTAATGAGCATATTGCTTCTGTTAACACATTTAGCCCTAAATCACCTTCTTTAATGAGAGAACAACCTGTTTCTTCTCAAGATGTGCATCCAAATTCTGCAGAATCTGATCCATTACCATCGACTGTTGAACCTAATATTCCTCCTTGTTCCACCTCTCAGGAAGTTCCTTCTGAGAAAGTTTCACCTCCTTTTATTCCAAATACTGAGTTTACCGGTTCTAATGAGCCTCCAGTTCCTTCTTTTTCCTCGTCTATCTCTCCTCCATGTCCTGGTCATGAAAATATTGTTCCTCTTCCTAAAAAACCCAAAGTTTCTTCCAAAAGACCAAGAGTAATAACTATCAAAGCTGGTCGAAAAAAGTTGCTCCTCAATATTCCATCTGTTCCCATTGATGGCATCTCTTTTCATCTTGAAGAGAATGTCCAAAGATGGAAATATGTTGTGTAA
Protein sequence
MHDHPPVSNPSSSFDHSDSDSNERDNVCLATLFRRAYFSTSFKISNEHIASVNTFSPKSPSLMREQPVSSQDVHPNSAESDPLPSTVEPNIPPCSTSQEVPSEKVSPPFIPNTEFTGSNEPPVPSFSSSISPPCPGHENIVPLPKKPKVSSKRPRVITIKAGRKKLLLNIPSVPIDGISFHLEENVQRWKYVV
Homology
BLAST of PI0001404 vs. ExPASy TrEMBL
Match:
A0A5A7SM94 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00110 PE=4 SV=1)
HSP 1 Score: 77.4 bits (189), Expect = 7.2e-11
Identity = 76/193 (39.38%), Postives = 99/193 (51.30%), Query Frame = 0
Query: 10 PSSSFDH-SDSDSNERDNVCLATLFRRAYFSTSFKISNEHIASVNTFSPKSPSLMREQPV 69
PS S H + DS+E+ +V LA L ++ + ++AS + +P S ++
Sbjct: 150 PSVSKTHILNMDSDEQYDVPLARLLKKGFVL--------NVASTKSVNP-IISARSQESS 209
Query: 70 SSQDVH------PNSAESDPLPSTVEPNIPPCSTSQEVP--SEKVSPPFIPNTEFTGSNE 129
SS+DV ++++ +P PS P I + E P E V P NT+ T E
Sbjct: 210 SSEDVFIPTPGLYHASDQEPSPSQHSPPIRNDVPTVETPIDDENVDP---TNTDATNIVE 269
Query: 130 PPVPSFSSSISPPCPGHENIVPLPKKPKVSSKRPRVITIKAGRKKLLLNIPSVPIDGISF 189
P V + PG V PK K R R IT K GRKK+ LNIPSVPIDGISF
Sbjct: 270 PDVYDDFQLETQQSPG----VSRPKGKKFQQNR-RNITTKTGRKKIPLNIPSVPIDGISF 325
Query: 190 HLEENVQRWKYVV 194
HLEENVQRWKYVV
Sbjct: 330 HLEENVQRWKYVV 325
BLAST of PI0001404 vs. ExPASy TrEMBL
Match:
A0A5A7SWH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G003740 PE=4 SV=1)
HSP 1 Score: 75.1 bits (183), Expect = 3.6e-10
Identity = 73/202 (36.14%), Postives = 97/202 (48.02%), Query Frame = 0
Query: 5 PPVSNPSSSFDHSDSD----SNERDNVCLATLFRRAYFSTSFKISNEHIASVNTFSPKSP 64
PP SF+ S +D S++ DNV LA L ++ +A+ + F+ KS
Sbjct: 41 PPQKPYKLSFEKSHADIPTNSDDLDNVPLALLLKK-------------VAAPDVFTEKS- 100
Query: 65 SLMREQPVSSQDVHPNSAESDPLPSTVEPNIPPCSTSQEVPSEKVSPPFIPNTEFTGSNE 124
PV S VH + S P + S+ + PS P P T+ SN+
Sbjct: 101 ----ADPVLS--VHSQESSSSKGVFVPTPGLRQTSSVEPGPSHYPIPIQSPITDNIASND 160
Query: 125 PPVPSFSSSISPPCPGHENIV---------PLPKKPKVSSKRPRVITIKAGRKKLLLNIP 184
P + P G+E++V P + KV R R IT K GRKK+ LNIP
Sbjct: 161 PHAAPNEDVVEP--VGNEDVVKPVDTNDHNDKPSRKKVLQNR-RNITTKTGRKKVPLNIP 219
Query: 185 SVPIDGISFHLEENVQRWKYVV 194
SVPIDGISFHLEE+VQRWK+VV
Sbjct: 221 SVPIDGISFHLEESVQRWKFVV 219
BLAST of PI0001404 vs. ExPASy TrEMBL
Match:
A0A5A7VFF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00670 PE=4 SV=1)
HSP 1 Score: 72.0 bits (175), Expect = 3.0e-09
Identity = 73/197 (37.06%), Postives = 102/197 (51.78%), Query Frame = 0
Query: 10 PSSSFDH-SDSDSNERDNVCLATLFRRAY-FSTSFKISNEHIASVNT-FSPKSPSLMR-- 69
P+ S DH S DS++ D+V L L ++ K S +H S +T S S ++
Sbjct: 82 PTVSEDHLSTMDSDDLDDVSLTRLVKKVVALDVVPKKSADHALSDHTQESSSSEGVLSPI 141
Query: 70 EQPVSSQDVH--PNSAESDPLPSTVEPNIPPCSTSQEVPSEKVS--PPFIPNTEFTGSNE 129
+ V D H P +A S P+ T + S+E P + V P P G +
Sbjct: 142 QDIVDPYDSHAAPPAASSLPVGRTE-------ARSEETPFDNVDDVEPVAP-----GDHN 201
Query: 130 PPVPSFSSSISPPCPGHENIVPLPKKPKVSSKR----PRVITIKAGRKKLLLNIPSVPID 189
VP + ++ P P + P+P +PK + K+ R IT K GRKK+ LNIPSVPI+
Sbjct: 202 DEVP-VADTVDPSAP--QETPPVPTEPKPARKKGQQIRRNITTKVGRKKIPLNIPSVPIN 261
Query: 190 GISFHLEENVQRWKYVV 194
GISFHLEENV+RWK+VV
Sbjct: 262 GISFHLEENVKRWKFVV 263
BLAST of PI0001404 vs. ExPASy TrEMBL
Match:
A0A5D3D6K3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00770 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 6.8e-09
Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 0
Query: 113 TEFTGSNEPPVPSFSSSISPPCPGHENIVPLPKKPKVSSKRP-RVITIKAGRKKLLLNIP 172
TE + PP+ I+P C G PK PK +++ R +T K GRKK+ N+P
Sbjct: 129 TEIPSEDIPPLT--DDPIAPSCEGRPKSPKDPKHPKRKTQQARRSVTTKTGRKKIPANVP 188
Query: 173 SVPIDGISFHLEENVQRWKYVV 194
SVPIDG+SFH E+NVQRWK+V+
Sbjct: 189 SVPIDGVSFHHEDNVQRWKFVM 208
BLAST of PI0001404 vs. ExPASy TrEMBL
Match:
A0A5D3DF71 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00540 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 6.8e-09
Identity = 65/194 (33.51%), Postives = 93/194 (47.94%), Query Frame = 0
Query: 10 PSSSFDH---------SDSDSNERDNVCLATLFRRAYFSTSFKISNE-HIASVNTFSPKS 69
P+SS H SD DSN+ D+V LA L + +SN+ H+ ++F +
Sbjct: 79 PASSVAHVPRVPATNVSDMDSNDWDDVPLAQLLKNTLIP---DVSNKLHVNPPSSFHSQE 138
Query: 70 PSLMREQPVSSQDVHPNSAESDPLPSTVEPNIPPCSTSQEVPSEKVSPPFIPNTEFTGSN 129
+ + + + P+++ P PS P P S V + + P +P G +
Sbjct: 139 SLSTKGVFIPTLGI-PSTSNVQPGPSAHSPPASPTLFS-SVDAHQSIPDVVPEVPLNGDD 198
Query: 130 EPPVPSFSSSISPPCPGHENIVPLPKKPKVSSKRPRVITIKAGRKKLLLNIPSVPIDGIS 189
P VP S+ I + P + K KR IT K RKK+ NIPSVPIDGIS
Sbjct: 199 NPVVPPASTDIP--------VASKPVEKKAQQKRCN-ITTKTDRKKIPPNIPSVPIDGIS 258
Query: 190 FHLEENVQRWKYVV 194
FH EE+VQRWK+V+
Sbjct: 259 FHHEESVQRWKFVL 258
BLAST of PI0001404 vs. NCBI nr
Match:
KAA0031748.1 (uncharacterized protein E6C27_scaffold506G00110 [Cucumis melo var. makuwa])
HSP 1 Score: 77.4 bits (189), Expect = 1.5e-10
Identity = 76/193 (39.38%), Postives = 99/193 (51.30%), Query Frame = 0
Query: 10 PSSSFDH-SDSDSNERDNVCLATLFRRAYFSTSFKISNEHIASVNTFSPKSPSLMREQPV 69
PS S H + DS+E+ +V LA L ++ + ++AS + +P S ++
Sbjct: 150 PSVSKTHILNMDSDEQYDVPLARLLKKGFVL--------NVASTKSVNP-IISARSQESS 209
Query: 70 SSQDVH------PNSAESDPLPSTVEPNIPPCSTSQEVP--SEKVSPPFIPNTEFTGSNE 129
SS+DV ++++ +P PS P I + E P E V P NT+ T E
Sbjct: 210 SSEDVFIPTPGLYHASDQEPSPSQHSPPIRNDVPTVETPIDDENVDP---TNTDATNIVE 269
Query: 130 PPVPSFSSSISPPCPGHENIVPLPKKPKVSSKRPRVITIKAGRKKLLLNIPSVPIDGISF 189
P V + PG V PK K R R IT K GRKK+ LNIPSVPIDGISF
Sbjct: 270 PDVYDDFQLETQQSPG----VSRPKGKKFQQNR-RNITTKTGRKKIPLNIPSVPIDGISF 325
Query: 190 HLEENVQRWKYVV 194
HLEENVQRWKYVV
Sbjct: 330 HLEENVQRWKYVV 325
BLAST of PI0001404 vs. NCBI nr
Match:
KAA0035674.1 (uncharacterized protein E6C27_scaffold285G003740 [Cucumis melo var. makuwa])
HSP 1 Score: 75.1 bits (183), Expect = 7.4e-10
Identity = 73/202 (36.14%), Postives = 97/202 (48.02%), Query Frame = 0
Query: 5 PPVSNPSSSFDHSDSD----SNERDNVCLATLFRRAYFSTSFKISNEHIASVNTFSPKSP 64
PP SF+ S +D S++ DNV LA L ++ +A+ + F+ KS
Sbjct: 41 PPQKPYKLSFEKSHADIPTNSDDLDNVPLALLLKK-------------VAAPDVFTEKS- 100
Query: 65 SLMREQPVSSQDVHPNSAESDPLPSTVEPNIPPCSTSQEVPSEKVSPPFIPNTEFTGSNE 124
PV S VH + S P + S+ + PS P P T+ SN+
Sbjct: 101 ----ADPVLS--VHSQESSSSKGVFVPTPGLRQTSSVEPGPSHYPIPIQSPITDNIASND 160
Query: 125 PPVPSFSSSISPPCPGHENIV---------PLPKKPKVSSKRPRVITIKAGRKKLLLNIP 184
P + P G+E++V P + KV R R IT K GRKK+ LNIP
Sbjct: 161 PHAAPNEDVVEP--VGNEDVVKPVDTNDHNDKPSRKKVLQNR-RNITTKTGRKKVPLNIP 219
Query: 185 SVPIDGISFHLEENVQRWKYVV 194
SVPIDGISFHLEE+VQRWK+VV
Sbjct: 221 SVPIDGISFHLEESVQRWKFVV 219
BLAST of PI0001404 vs. NCBI nr
Match:
KAA0066044.1 (uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa] >TYJ99852.1 uncharacterized protein E5676_scaffold446G00670 [Cucumis melo var. makuwa])
HSP 1 Score: 72.0 bits (175), Expect = 6.3e-09
Identity = 73/197 (37.06%), Postives = 102/197 (51.78%), Query Frame = 0
Query: 10 PSSSFDH-SDSDSNERDNVCLATLFRRAY-FSTSFKISNEHIASVNT-FSPKSPSLMR-- 69
P+ S DH S DS++ D+V L L ++ K S +H S +T S S ++
Sbjct: 82 PTVSEDHLSTMDSDDLDDVSLTRLVKKVVALDVVPKKSADHALSDHTQESSSSEGVLSPI 141
Query: 70 EQPVSSQDVH--PNSAESDPLPSTVEPNIPPCSTSQEVPSEKVS--PPFIPNTEFTGSNE 129
+ V D H P +A S P+ T + S+E P + V P P G +
Sbjct: 142 QDIVDPYDSHAAPPAASSLPVGRTE-------ARSEETPFDNVDDVEPVAP-----GDHN 201
Query: 130 PPVPSFSSSISPPCPGHENIVPLPKKPKVSSKR----PRVITIKAGRKKLLLNIPSVPID 189
VP + ++ P P + P+P +PK + K+ R IT K GRKK+ LNIPSVPI+
Sbjct: 202 DEVP-VADTVDPSAP--QETPPVPTEPKPARKKGQQIRRNITTKVGRKKIPLNIPSVPIN 261
Query: 190 GISFHLEENVQRWKYVV 194
GISFHLEENV+RWK+VV
Sbjct: 262 GISFHLEENVKRWKFVV 263
BLAST of PI0001404 vs. NCBI nr
Match:
TYK22185.1 (uncharacterized protein E5676_scaffold333G00540 [Cucumis melo var. makuwa])
HSP 1 Score: 70.9 bits (172), Expect = 1.4e-08
Identity = 65/194 (33.51%), Postives = 93/194 (47.94%), Query Frame = 0
Query: 10 PSSSFDH---------SDSDSNERDNVCLATLFRRAYFSTSFKISNE-HIASVNTFSPKS 69
P+SS H SD DSN+ D+V LA L + +SN+ H+ ++F +
Sbjct: 79 PASSVAHVPRVPATNVSDMDSNDWDDVPLAQLLKNTLIP---DVSNKLHVNPPSSFHSQE 138
Query: 70 PSLMREQPVSSQDVHPNSAESDPLPSTVEPNIPPCSTSQEVPSEKVSPPFIPNTEFTGSN 129
+ + + + P+++ P PS P P S V + + P +P G +
Sbjct: 139 SLSTKGVFIPTLGI-PSTSNVQPGPSAHSPPASPTLFS-SVDAHQSIPDVVPEVPLNGDD 198
Query: 130 EPPVPSFSSSISPPCPGHENIVPLPKKPKVSSKRPRVITIKAGRKKLLLNIPSVPIDGIS 189
P VP S+ I + P + K KR IT K RKK+ NIPSVPIDGIS
Sbjct: 199 NPVVPPASTDIP--------VASKPVEKKAQQKRCN-ITTKTDRKKIPPNIPSVPIDGIS 258
Query: 190 FHLEENVQRWKYVV 194
FH EE+VQRWK+V+
Sbjct: 259 FHHEESVQRWKFVL 258
BLAST of PI0001404 vs. NCBI nr
Match:
KAA0053559.1 (uncharacterized protein E6C27_scaffold190G001250 [Cucumis melo var. makuwa] >TYK19152.1 uncharacterized protein E5676_scaffold522G00770 [Cucumis melo var. makuwa])
HSP 1 Score: 70.9 bits (172), Expect = 1.4e-08
Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 0
Query: 113 TEFTGSNEPPVPSFSSSISPPCPGHENIVPLPKKPKVSSKRP-RVITIKAGRKKLLLNIP 172
TE + PP+ I+P C G PK PK +++ R +T K GRKK+ N+P
Sbjct: 129 TEIPSEDIPPLT--DDPIAPSCEGRPKSPKDPKHPKRKTQQARRSVTTKTGRKKIPANVP 188
Query: 173 SVPIDGISFHLEENVQRWKYVV 194
SVPIDG+SFH E+NVQRWK+V+
Sbjct: 189 SVPIDGVSFHHEDNVQRWKFVM 208
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SM94 | 7.2e-11 | 39.38 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7SWH6 | 3.6e-10 | 36.14 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7VFF7 | 3.0e-09 | 37.06 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3D6K3 | 6.8e-09 | 46.34 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3DF71 | 6.8e-09 | 33.51 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0031748.1 | 1.5e-10 | 39.38 | uncharacterized protein E6C27_scaffold506G00110 [Cucumis melo var. makuwa] | [more] |
KAA0035674.1 | 7.4e-10 | 36.14 | uncharacterized protein E6C27_scaffold285G003740 [Cucumis melo var. makuwa] | [more] |
KAA0066044.1 | 6.3e-09 | 37.06 | uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa] >TYJ99... | [more] |
TYK22185.1 | 1.4e-08 | 33.51 | uncharacterized protein E5676_scaffold333G00540 [Cucumis melo var. makuwa] | [more] |
KAA0053559.1 | 1.4e-08 | 46.34 | uncharacterized protein E6C27_scaffold190G001250 [Cucumis melo var. makuwa] >TYK... | [more] |
Match Name | E-value | Identity | Description | |