Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCTGATCTCAACCTCGGACCTATCAAGTTGAGGTATTCTGAGAAGTGGGCTTCCGGGCCGAACGACACACCTGGCCCCCAGAACTTGGTGGCCAGGTACCTGAAGGGCCTTGATTCCGAGGCCAAGGAGGATGAGAAGGATGAAGAGGAACCGACACAGGAGAGTGATGTCGTCCGCACCACTCAAGGCGAGGATAGAGCTACTCCCCACCCTACACGTATGGCTCCTTCTTCTCAAGAGGCAACACTTGTTGACTCACAGGAGGTCGACCTACTAGCTTCCCAAGGTGAGCTTGGTAGCATCTTTGAAGCTCTCCATCAATCATATGGCAGCTCTTTCTCCTTTTATTGCAAATTTTTTCATTGTTTTTATTTTTCTTTTTGTAAACTTTAGAGGACTGGGGCATATGTACCTTGGTCCTTTGATTTAATGAATCAATGCTTCTTTTTTTAATCCATTCCAAGCAATTTTTATTATTATGGTTGATCTTCTTGCTTGTCTATTGTTTAACTTTAGCTTAATATTGACTTGGAGTAAATAAGATGTTGAAAGTGCAATTTTTATTCATGTCACACCTCGCACCTTGTTTGGAGTTGATGAGTGTAGATATTCATGTCGTACCTTTCACCTTAGGACCTGTGGCATGTAGCCCCCATTTCATTCAAAGTCGAACCTTTTAAAAAATAAGACACAGAATCAAATCAATGAGATAGCTTTTATTATTTTACCCTGAATATTTACATAAGTCTAAAAATTTTGAACCATTTTACAATTCAAGGGTAATAACGCTTAAGGTGTTTTGCGTTCTATGGATGTAGGAGCAGGTTCCCCTCCAAGTCGGTCAACATGTATGTGCCTAGGCGCACGATACCTTTGA
mRNA sequence
ATGGCTCCTGATCTCAACCTCGGACCTATCAAGTTGAGGTATTCTGAGAAGTGGGCTTCCGGGCCGAACGACACACCTGGCCCCCAGAACTTGGTGGCCAGGTACCTGAAGGGCCTTGATTCCGAGGCCAAGGAGGATGAGAAGGATGAAGAGGAACCGACACAGGAGAGTGATGTCGTCCGCACCACTCAAGGCGAGGATAGAGCTACTCCCCACCCTACACGTATGGCTCCTTCTTCTCAAGAGGCAACACTTGTTGACTCACAGGAGGTCGACCTACTAGCTTCCCAAGGAGCAGGTTCCCCTCCAAGTCGGTCAACATGTATGTGCCTAGGCGCACGATACCTTTGA
Coding sequence (CDS)
ATGGCTCCTGATCTCAACCTCGGACCTATCAAGTTGAGGTATTCTGAGAAGTGGGCTTCCGGGCCGAACGACACACCTGGCCCCCAGAACTTGGTGGCCAGGTACCTGAAGGGCCTTGATTCCGAGGCCAAGGAGGATGAGAAGGATGAAGAGGAACCGACACAGGAGAGTGATGTCGTCCGCACCACTCAAGGCGAGGATAGAGCTACTCCCCACCCTACACGTATGGCTCCTTCTTCTCAAGAGGCAACACTTGTTGACTCACAGGAGGTCGACCTACTAGCTTCCCAAGGAGCAGGTTCCCCTCCAAGTCGGTCAACATGTATGTGCCTAGGCGCACGATACCTTTGA
Protein sequence
MAPDLNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQGEDRATPHPTRMAPSSQEATLVDSQEVDLLASQGAGSPPSRSTCMCLGARYL
Homology
BLAST of Moc04g25730 vs. NCBI nr
Match:
XP_022152119.1 (uncharacterized protein LOC111019909 [Momordica charantia])
HSP 1 Score: 72.8 bits (177), Expect = 2.2e-09
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 0
Query: 5 LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
++L +K +YSEKWASGPN TPGPQ+LV +Y++ LDS+ D ++E+ P+QE + + TTQ
Sbjct: 228 IDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSD-YSDMEEEDAPSQEPNEIGTTQ 287
Query: 65 GEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
E PS Q+ SQEV+LL S+G
Sbjct: 288 EE----------VPSQQDG----SQEVNLLGSEG 306
BLAST of Moc04g25730 vs. NCBI nr
Match:
XP_022158409.1 (uncharacterized protein LOC111024898 [Momordica charantia])
HSP 1 Score: 70.1 bits (170), Expect = 1.4e-08
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 0
Query: 5 LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
++L IK +YSEKWASGPN TPGPQ+LV +Y++ LDS+ D ++ + P+QE + V TTQ
Sbjct: 159 IDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSD-YSDVEEGDAPSQEPNEVGTTQ 218
Query: 65 GEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
E PS L SQEV+LL SQG
Sbjct: 219 EE----------VPSQ----LGGSQEVNLLGSQG 237
BLAST of Moc04g25730 vs. NCBI nr
Match:
XP_022142326.1 (uncharacterized protein LOC111012467 [Momordica charantia])
HSP 1 Score: 68.2 bits (165), Expect = 5.4e-08
Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 0
Query: 4 DLNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTT 63
+++LG +K RY+EKWASGPN T GP +LV +Y++ LDS+ + ++D E P+QE V TT
Sbjct: 475 EVDLGDLKKRYAEKWASGPNGTSGPASLVDKYVRDLDSDYSDLDED-EVPSQEPTEVGTT 534
Query: 64 QGEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
Q PS Q+ SQEV+LL SQG
Sbjct: 535 Q----------EGVPSQQDG----SQEVNLLGSQG 554
BLAST of Moc04g25730 vs. NCBI nr
Match:
XP_022147182.1 (uncharacterized protein LOC111016193 [Momordica charantia])
HSP 1 Score: 64.3 bits (155), Expect = 7.9e-07
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0
Query: 5 LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
++L +K RYSE WASGPN TPGPQ+LV +Y++ LDS+ D ++E+ P+QE V TTQ
Sbjct: 220 IDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSD-YSDMEEEDAPSQEPTKVGTTQ 279
Query: 65 GE 67
E
Sbjct: 280 EE 280
BLAST of Moc04g25730 vs. NCBI nr
Match:
XP_022159252.1 (uncharacterized protein LOC111025665 [Momordica charantia])
HSP 1 Score: 62.0 bits (149), Expect = 3.9e-06
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 0
Query: 5 LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
++L +K +YSEKWASGPN TP PQ+LV +Y++ LDS+ D ++E+ P+QE V TTQ
Sbjct: 466 IDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSD-YSDMEEEDAPSQEPXEVGTTQ 525
Query: 65 GE 67
E
Sbjct: 526 EE 526
BLAST of Moc04g25730 vs. ExPASy TrEMBL
Match:
A0A6J1DF31 (uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019909 PE=4 SV=1)
HSP 1 Score: 72.8 bits (177), Expect = 1.1e-09
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 0
Query: 5 LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
++L +K +YSEKWASGPN TPGPQ+LV +Y++ LDS+ D ++E+ P+QE + + TTQ
Sbjct: 228 IDLSNLKKKYSEKWASGPNGTPGPQSLVVKYVRELDSD-YSDMEEEDAPSQEPNEIGTTQ 287
Query: 65 GEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
E PS Q+ SQEV+LL S+G
Sbjct: 288 EE----------VPSQQDG----SQEVNLLGSEG 306
BLAST of Moc04g25730 vs. ExPASy TrEMBL
Match:
A0A6J1DZB5 (uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024898 PE=4 SV=1)
HSP 1 Score: 70.1 bits (170), Expect = 6.9e-09
Identity = 45/94 (47.87%), Postives = 59/94 (62.77%), Query Frame = 0
Query: 5 LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
++L IK +YSEKWASGPN TPGPQ+LV +Y++ LDS+ D ++ + P+QE + V TTQ
Sbjct: 159 IDLSDIKKKYSEKWASGPNGTPGPQSLVDKYVRELDSD-YSDVEEGDAPSQEPNEVGTTQ 218
Query: 65 GEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
E PS L SQEV+LL SQG
Sbjct: 219 EE----------VPSQ----LGGSQEVNLLGSQG 237
BLAST of Moc04g25730 vs. ExPASy TrEMBL
Match:
A0A6J1CLV1 (uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012467 PE=4 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 2.6e-08
Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 0
Query: 4 DLNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTT 63
+++LG +K RY+EKWASGPN T GP +LV +Y++ LDS+ + ++D E P+QE V TT
Sbjct: 475 EVDLGDLKKRYAEKWASGPNGTSGPASLVDKYVRDLDSDYSDLDED-EVPSQEPTEVGTT 534
Query: 64 QGEDRATPHPTRMAPSSQEATLVDSQEVDLLASQG 99
Q PS Q+ SQEV+LL SQG
Sbjct: 535 Q----------EGVPSQQDG----SQEVNLLGSQG 554
BLAST of Moc04g25730 vs. ExPASy TrEMBL
Match:
A0A6J1D1N9 (uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016193 PE=4 SV=1)
HSP 1 Score: 64.3 bits (155), Expect = 3.8e-07
Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = 0
Query: 5 LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
++L +K RYSE WASGPN TPGPQ+LV +Y++ LDS+ D ++E+ P+QE V TTQ
Sbjct: 220 IDLSDLKKRYSENWASGPNGTPGPQSLVDKYVRELDSD-YSDMEEEDAPSQEPTKVGTTQ 279
Query: 65 GE 67
E
Sbjct: 280 EE 280
BLAST of Moc04g25730 vs. ExPASy TrEMBL
Match:
A0A6J1DZB3 (uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025665 PE=4 SV=1)
HSP 1 Score: 62.0 bits (149), Expect = 1.9e-06
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 0
Query: 5 LNLGPIKLRYSEKWASGPNDTPGPQNLVARYLKGLDSEAKEDEKDEEEPTQESDVVRTTQ 64
++L +K +YSEKWASGPN TP PQ+LV +Y++ LDS+ D ++E+ P+QE V TTQ
Sbjct: 466 IDLNGLKKKYSEKWASGPNGTPDPQSLVDKYVRELDSD-YSDMEEEDAPSQEPXEVGTTQ 525
Query: 65 GE 67
E
Sbjct: 526 EE 526
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DF31 | 1.1e-09 | 45.74 | uncharacterized protein LOC111019909 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
A0A6J1DZB5 | 6.9e-09 | 47.87 | uncharacterized protein LOC111024898 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1CLV1 | 2.6e-08 | 45.26 | uncharacterized protein LOC111012467 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
A0A6J1D1N9 | 3.8e-07 | 53.23 | uncharacterized protein LOC111016193 OS=Momordica charantia OX=3673 GN=LOC111016... | [more] |
A0A6J1DZB3 | 1.9e-06 | 51.61 | uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
Match Name | E-value | Identity | Description | |