Homology
BLAST of MS009008 vs. NCBI nr
Match:
XP_022146877.1 (pentatricopeptide repeat-containing protein At2g01740 [Momordica charantia])
HSP 1 Score: 1073.9 bits (2776), Expect = 4.1e-310
Identity = 529/536 (98.69%), Postives = 532/536 (99.25%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
MVKDALQFLAYLRRISRFPSPFTCNKLLHSL+NSGCGELSAKLLFHFLSKGYSPHPSSFN
Sbjct: 1 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLVNSGCGELSAKLLFHFLSKGYSPHPSSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLL GFCVNYQIRKACFLVNRVRGS
Sbjct: 61 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLXGFCVNYQIRKACFLVNRVRGS 120
Query: 125 ELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMGN 184
ELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMGN
Sbjct: 121 ELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMGN 180
Query: 185 GMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGC 244
GMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGC
Sbjct: 181 GMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGC 240
Query: 245 CKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIRLDL 304
CKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVD ATKYINRMFDR+IRLDL
Sbjct: 241 CKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDDATKYINRMFDREIRLDL 300
Query: 305 TAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYRK 364
TAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSY+K
Sbjct: 301 TAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYQK 360
Query: 365 LLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE 424
LLARGFE DAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE
Sbjct: 361 LLARGFEPDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE 420
Query: 425 RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM 484
RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM
Sbjct: 421 RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM 480
Query: 485 AEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMRKRGI 541
AEKGLMIEAKQVFEDMLNKGITPDSVA NILIRGYHKLGNEAAILGLHDEMRKRGI
Sbjct: 481 AEKGLMIEAKQVFEDMLNKGITPDSVACNILIRGYHKLGNEAAILGLHDEMRKRGI 536
BLAST of MS009008 vs. NCBI nr
Match:
XP_023537260.1 (pentatricopeptide repeat-containing protein At2g01740 [Cucurbita pepo subsp. pepo] >XP_023537269.1 pentatricopeptide repeat-containing protein At2g01740 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 931.0 bits (2405), Expect = 4.6e-267
Identity = 448/536 (83.58%), Postives = 497/536 (92.72%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
MVK+ALQFLA+LRRIS FPSPFTCNKL+HSLINSGCGELSAK+LFHFLSKGY+PH SSFN
Sbjct: 1 MVKEALQFLAHLRRISGFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHASSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
SIISFFC+LG +++A++IL+SMPRFGCSPDIVSYNSLL G+C +Y+IR+ACFLVNRVRG
Sbjct: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
Query: 125 ELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMGN 184
L+PDLVMFNILFNGFAK YMK EAFMYLGLMWK CLPNVVTYGT +DMFCKMGDME+GN
Sbjct: 121 VLNPDLVMFNILFNGFAKAYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGN 180
Query: 185 GMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGC 244
MF DM+KVGVVPN VAFSSLIDGYCKAGSLD+AF Y E+M++CSVQPNEFTY+TLIDGC
Sbjct: 181 KMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDGC 240
Query: 245 CKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIRLDL 304
CKQGML RAD LFE+ML+VGI PNCTV+TSIIDGHFKKGNVD A KYINRMFDR+I LDL
Sbjct: 241 CKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLDL 300
Query: 305 TAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYRK 364
TAYTVVISGFRRVGRL KAMEAAE+VVKNGLLPD IILTAIMD+HFKAGNLKEALN+YR
Sbjct: 301 TAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRI 360
Query: 365 LLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE 424
LLARGFE D +TLSTL+DGLCK+GY+QEARRY+++EKANE+LYTVLIDALCKEG+LDE E
Sbjct: 361 LLARGFEPDTVTLSTLIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAE 420
Query: 425 RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM 484
R I+EM EAGFVPDKYVYTSWIAELCKQG+LLKAF +KKRMV+E+IEPDLLTYSSLI G+
Sbjct: 421 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 480
Query: 485 AEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMRKRGI 541
AEKGLMIEAKQVF+DMLN GITPDSVAY+ILIRGYH GN AI GLHDEMR RGI
Sbjct: 481 AEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISGLHDEMRTRGI 536
BLAST of MS009008 vs. NCBI nr
Match:
XP_022995400.1 (pentatricopeptide repeat-containing protein At2g01740 [Cucurbita maxima] >XP_022995410.1 pentatricopeptide repeat-containing protein At2g01740 [Cucurbita maxima])
HSP 1 Score: 930.6 bits (2404), Expect = 6.0e-267
Identity = 447/536 (83.40%), Postives = 498/536 (92.91%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
MVK+ALQFLA+LRRISRFPSPFTCNKL+HSLINSGCGELSAK+LFHFLSKGY+PH SSFN
Sbjct: 1 MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
SIISFFC+LG +++A++IL+SMPRFGCSPDIVSYNSLL G+C +Y+IR+ACFLVNRVRG
Sbjct: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
Query: 125 ELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMGN 184
L+PDLVMFNILFNGFAKVYMK EAFMYLGLMWK CLPNVVTYGT +DMFCKMGDME+GN
Sbjct: 121 LLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGN 180
Query: 185 GMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGC 244
MF DM+KVGVVPN VAFSSLIDGYCKAGSL++AF Y E+M++CSVQPNEFTY+TLIDGC
Sbjct: 181 KMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDGC 240
Query: 245 CKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIRLDL 304
CKQGML RAD LFE+ML+VGI PNCTV+TSIIDGHFKKGNVD A KYINRMFDR+I LDL
Sbjct: 241 CKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELDL 300
Query: 305 TAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYRK 364
TAYTVVI+GFRRVGRL KAMEAAE+VVKNGLLPD IILTAIMD+HFKAGNLKEALN+YR
Sbjct: 301 TAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRI 360
Query: 365 LLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE 424
LLARGFE D +TLS L+DGLCK+GY+QEARRY+++EKANE+LYTVLIDALCKEG+LDE E
Sbjct: 361 LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAE 420
Query: 425 RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM 484
R I+EM EAGFVPDKYVYTSWIAELCKQG+LLKAF +KKRMV+E+IEPDLLTYSSLI G+
Sbjct: 421 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 480
Query: 485 AEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMRKRGI 541
AEKGLMIEAKQVF+DMLN GITPDSVAY+ILIRGYH GN AI GLHDEMR RGI
Sbjct: 481 AEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISGLHDEMRTRGI 536
BLAST of MS009008 vs. NCBI nr
Match:
XP_038891429.1 (pentatricopeptide repeat-containing protein At2g01740 [Benincasa hispida] >XP_038891430.1 pentatricopeptide repeat-containing protein At2g01740 [Benincasa hispida] >XP_038891431.1 pentatricopeptide repeat-containing protein At2g01740 [Benincasa hispida])
HSP 1 Score: 925.6 bits (2391), Expect = 1.9e-265
Identity = 444/537 (82.68%), Postives = 497/537 (92.55%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
M+K+AL+FLA+LRRISRFP+PFTCNKLLHSLINSGCG+LSAKLLFHFLS Y+PHPSSFN
Sbjct: 1 MLKEALKFLAHLRRISRFPTPFTCNKLLHSLINSGCGDLSAKLLFHFLSNRYTPHPSSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
SIISFFCRLG V+FA+QIL+SMP FGCSPDIVSYNSLLDG+C +YQI+KACFLV+RVRG
Sbjct: 61 SIISFFCRLGNVKFAEQILNSMPTFGCSPDIVSYNSLLDGYCASYQIQKACFLVDRVRGC 120
Query: 125 ELS-PDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMG 184
EL+ PDLVMFNILFNG AKVYMK EAFMYLGLMWK+CLP+VVTYGTF+DMFCKMGDMEMG
Sbjct: 121 ELNRPDLVMFNILFNGLAKVYMKNEAFMYLGLMWKYCLPSVVTYGTFVDMFCKMGDMEMG 180
Query: 185 NGMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDG 244
N MFLDM+KVGV+PN V FSSLIDGYCKAGSLD+AF+YFE+MEECSV+PNEFTY+ LIDG
Sbjct: 181 NRMFLDMMKVGVMPNLVVFSSLIDGYCKAGSLDVAFEYFERMEECSVRPNEFTYSILIDG 240
Query: 245 CCKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIRLD 304
CCK GML RAD LFEKML+ GI PNCTVYTSIIDGHFKKGNVD KYIN MFDR+I+LD
Sbjct: 241 CCKHGMLERADSLFEKMLSAGILPNCTVYTSIIDGHFKKGNVDDVIKYINGMFDREIKLD 300
Query: 305 LTAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYR 364
LTAYTV+ISGF RVGRL K+MEAAE VVKNGLLPD IILTAIMD+HFKAGN+KEALN+Y+
Sbjct: 301 LTAYTVIISGFHRVGRLDKSMEAAEYVVKNGLLPDRIILTAIMDVHFKAGNVKEALNAYK 360
Query: 365 KLLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEV 424
LL++GFE D +T S L+DGLCKHGY+QEARRYL++EKANE+LYTV IDALCKEG+LDE
Sbjct: 361 ILLSKGFEPDVVTHSALIDGLCKHGYLQEARRYLVKEKANEILYTVFIDALCKEGNLDEA 420
Query: 425 ERIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICG 484
ER I+EMSEAGFV DKYVYTSWIAELCKQG+LLKAF++KKRMV+EHIEPDLLTYSSLI G
Sbjct: 421 ERTIKEMSEAGFVLDKYVYTSWIAELCKQGNLLKAFMVKKRMVQEHIEPDLLTYSSLIGG 480
Query: 485 MAEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMRKRGI 541
+AEKGLMIEAKQVF+DM+NKGITPDSV+Y+ILIRGYH GN AAI GLHDEMRKRGI
Sbjct: 481 LAEKGLMIEAKQVFDDMVNKGITPDSVSYDILIRGYHNQGNGAAISGLHDEMRKRGI 537
BLAST of MS009008 vs. NCBI nr
Match:
XP_022943027.1 (pentatricopeptide repeat-containing protein At2g01740 [Cucurbita moschata] >XP_022943028.1 pentatricopeptide repeat-containing protein At2g01740 [Cucurbita moschata])
HSP 1 Score: 919.8 bits (2376), Expect = 1.1e-263
Identity = 442/536 (82.46%), Postives = 493/536 (91.98%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
MVK+ALQ LA+LRRISRFPSPFTCNKL+HSLINSGCGELSAK+LFHFLSKGY+PH SSFN
Sbjct: 1 MVKEALQCLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
SIISFFC+LG +++A++IL+SMPRFGCSPDIVSYNSLL G+C +Y+IR+ CFLVNR+R
Sbjct: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREVCFLVNRLRRG 120
Query: 125 ELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMGN 184
L+PDLVMFNILFNGFAKVYMK EAFMYLGLMWK CLPNVVTYGT +DMFCKMGDME+GN
Sbjct: 121 VLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGN 180
Query: 185 GMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGC 244
MF DM+KVGVVPN VAFSSLIDGYCKAGSLD+AF Y E+M++CSVQPNEFTY+TLIDGC
Sbjct: 181 KMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDGC 240
Query: 245 CKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIRLDL 304
CKQGML RAD LFE+ML+VGI PNCTV+TSIIDGHFKKGNVD A KYINRMFDR+I LDL
Sbjct: 241 CKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLDL 300
Query: 305 TAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYRK 364
TAYTVVISGFRRVGRL KAMEAAE+VVKNGLLPD IILTAIMD+HFKAGNLKEALN+YR
Sbjct: 301 TAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRM 360
Query: 365 LLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE 424
LLARGFE D +TLS L+DGLCK+GY+ EAR+Y+++EKANE+LYTV IDALCKEG+LDE E
Sbjct: 361 LLARGFEPDTVTLSALIDGLCKNGYLPEARQYVVKEKANEILYTVFIDALCKEGNLDEAE 420
Query: 425 RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM 484
R I+EM EAGFVPDKYVYTSWIAELCKQG+LLKAF +KKRMV+E+IEPDLLTYSSLI G+
Sbjct: 421 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 480
Query: 485 AEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMRKRGI 541
AEKGLMIEAKQVF+DMLN GITPDSVAY+ILIRGYH GN AI GLHDEMR RGI
Sbjct: 481 AEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISGLHDEMRTRGI 536
BLAST of MS009008 vs. ExPASy Swiss-Prot
Match:
Q9ZUA2 (Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX=3702 GN=At2g01740 PE=3 SV=1)
HSP 1 Score: 592.0 bits (1525), Expect = 6.6e-168
Identity = 282/539 (52.32%), Postives = 391/539 (72.54%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
MV++ALQFL+ LR+ S P PFTCNK +H LINS CG LS K L + +S+GY+PH SSFN
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
S++SF C+LG+V+FA+ I+HSMPRFGC PD++SYNSL+DG C N IR A ++ +R S
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 125 E---LSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDME 184
PD+V FN LFNGF+K+ M E F+Y+G+M K C PNVVTY T+ID FCK G+++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 185 MGNGMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLI 244
+ F M + + PN V F+ LIDGYCKAG L++A +++M + N TY LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 245 DGCCKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIR 304
DG CK+G + RA+ ++ +M+ + PN VYT+IIDG F++G+ D A K++ +M ++ +R
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 305 LDLTAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNS 364
LD+TAY V+ISG G+L++A E ED+ K+ L+PD +I T +M+ +FK+G +K A+N
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 365 YRKLLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLD 424
Y KL+ RGFE D + LST++DG+ K+G + EA Y EKAN+V+YTVLIDALCKEG
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420
Query: 425 EVERIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLI 484
EVER+ ++SEAG VPDK++YTSWIA LCKQG+L+ AF +K RMV+E + DLL Y++LI
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 485 CGMAEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMRKRGI 541
G+A KGLM+EA+QVF++MLN GI+PDS +++LIR Y K GN AA L +M++RG+
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
BLAST of MS009008 vs. ExPASy Swiss-Prot
Match:
P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)
HSP 1 Score: 298.1 bits (762), Expect = 2.0e-79
Identity = 168/530 (31.70%), Postives = 278/530 (52.45%), Query Frame = 0
Query: 1 IHLRMVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHP 60
I L M+++A+Q + ++R FP +CN LLH G + + + G P
Sbjct: 203 IDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTV 262
Query: 61 SSFNSIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNR 120
++N +I C+ G VE A+ + M G PD V+YNS++DGF ++
Sbjct: 263 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 121 VRGSELSPDLVMFNILFNGFAKV-YMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGD 180
++ PD++ +N L N F K + Y + PNVV+Y T +D FCK G
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 181 MEMGNGMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYAT 240
M+ ++DM +VG+VPN ++SLID CK G+L AF+ +M + V+ N TY
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 241 LIDGCCKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRK 300
LIDG C + A+ LF KM G+ PN Y ++I G K N+D A + +N + R
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 301 IRLDLTAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEAL 360
I+ DL Y I G + +++ A ++ + G+ + +I T +MD +FK+GN E L
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 361 NSYRKLLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIR------EKANEVLYTVLIDA 420
+ ++ E+ +T L+DGLCK+ V +A Y R +AN ++T +ID
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 421 LCKEGSLDEVERIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPD 480
LCK+ ++ + E+M + G VPD+ YTS + KQG++L+A ++ +M ++ D
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 481 LLTYSSLICGMAEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLG 524
LL Y+SL+ G++ + +A+ E+M+ +GI PD V +++ +++LG
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELG 732
BLAST of MS009008 vs. ExPASy Swiss-Prot
Match:
Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)
HSP 1 Score: 257.7 bits (657), Expect = 3.0e-67
Identity = 158/547 (28.88%), Postives = 267/547 (48.81%), Query Frame = 0
Query: 1 IHLR--MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSP 60
++LR M++D+L+ + PS +TCN +L S++ SG L L + P
Sbjct: 132 VYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICP 191
Query: 61 HPSSFNSIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLV 120
++FN +I+ C G E + ++ M + G +P IV+YN++L +C + + A L+
Sbjct: 192 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 251
Query: 121 NRVRGSELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCL-PNVVTYGTFIDMFCKM 180
+ ++ + D+ +N+L + + + ++ L M K + PN VTY T I+ F
Sbjct: 252 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 311
Query: 181 GDMEMGNGMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTY 240
G + + + + +M+ G+ PN V F++LIDG+ G+ A + F ME + P+E +Y
Sbjct: 312 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 371
Query: 241 ATLIDGCCKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFD 300
L+DG CK A + +M G+ YT +IDG K G +D A +N M
Sbjct: 372 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 431
Query: 301 RKIRLDLTAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKE 360
I D+ Y+ +I+GF +VGR + A E + + GL P+GII + ++ + G LKE
Sbjct: 432 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 491
Query: 361 ALNSYRKLLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKA-----NEVLYTVLID 420
A+ Y ++ G D T + L+ LCK G V EA ++ + N V + LI+
Sbjct: 492 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 551
Query: 421 ALCKEGSLDEVERIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEP 480
G + + +EM++ G P + Y S + LCK G L +A K +
Sbjct: 552 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 611
Query: 481 DLLTYSSLICGMAEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLH 540
D + Y++L+ M + G + +A +F +M+ + I PDS Y LI G + G +
Sbjct: 612 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 671
BLAST of MS009008 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 253.4 bits (646), Expect = 5.6e-66
Identity = 160/554 (28.88%), Postives = 268/554 (48.38%), Query Frame = 0
Query: 3 LRMVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLF-HFLSKGYSPHPS 62
L ++ AL + + P + N +L + I S A+ +F L SP+
Sbjct: 147 LSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVF 206
Query: 63 SFNSIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRV 122
++N +I FC G ++ A + M GC P++V+YN+L+DG+C +I L+ +
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 123 RGSELSPDLVMFNILFNGFAKV-YMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDM 182
L P+L+ +N++ NG + MK +F+ + + + VTY T I +CK G+
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 183 EMGNGMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATL 242
M +M++ G+ P+ + ++SLI CKAG+++ A ++ ++M + PNE TY TL
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 243 IDGCCKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKI 302
+DG ++G + A + +M + G SP+ Y ++I+GH G ++ A + M ++ +
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 303 RLDLTAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALN 362
D+ +Y+ V+SGF R + +A+ ++V+ G+ PD I ++++ + KEA +
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 363 SYRKLLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSL 422
Y ++L G D T YT LI+A C EG L
Sbjct: 507 LYEEMLRVGLPPDEFT------------------------------YTALINAYCMEGDL 566
Query: 423 DEVERIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYS-- 482
++ ++ EM E G +PD Y+ I L KQ +A + ++ E P +TY
Sbjct: 567 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 626
Query: 483 -------------SLICGMAEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNE 540
SLI G KG+M EA QVFE ML K PD AYNI+I G+ + G+
Sbjct: 627 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 670
BLAST of MS009008 vs. ExPASy Swiss-Prot
Match:
Q9C8T7 (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX=3702 GN=At1g63330 PE=2 SV=2)
HSP 1 Score: 251.5 bits (641), Expect = 2.1e-65
Identity = 153/520 (29.42%), Postives = 260/520 (50.00%), Query Frame = 0
Query: 23 PSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFNSIISFFCRLGRVEFAQQI 82
PS F NKLL ++ +L L G S + ++N +I+ FCR ++ A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 83 LHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGSELSPDLVMFNILFNGFAK 142
L M + G P IV+ +SLL+G+C +I A LV+++ PD + F L +G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 143 VYMKREAFMYLG-LMWKFCLPNVVTYGTFIDMFCKMGDMEMGNGMFLDMVKVGVVPNFVA 202
EA + ++ + C PN+VTYG ++ CK GD+++ + M + + V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 203 FSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGCCKQGMLGRADLLFEKML 262
F+++ID CK +D A F++ME ++PN TY++LI C G A L M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 263 NVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIRLDLTAYTVVISGFRRVGRLQ 322
I+PN + ++ID K+G A K + M R I D+ Y +I+GF RL
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 323 KAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYRKLLARGFELDAMTLSTLM 382
KA + E +V PD ++ K+ +++ +R++ RG D +T +TL+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 383 DGLCKHGYVQEARRYLIREKANEV-----LYTVLIDALCKEGSLDEVERIIEEMSEAGFV 442
GL G A++ + ++ V Y++L+D LC G L++ + + M ++
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 443 PDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGMAEKGLMIEAKQV 502
D Y+YT+ I +CK G + + + + + ++P+++TY+++I G+ K L+ EA +
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 503 FEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMR 537
+ M G PDS YN LIR + + G++AA L EMR
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
BLAST of MS009008 vs. ExPASy TrEMBL
Match:
A0A6J1D0T3 (pentatricopeptide repeat-containing protein At2g01740 OS=Momordica charantia OX=3673 GN=LOC111015970 PE=4 SV=1)
HSP 1 Score: 1073.9 bits (2776), Expect = 2.0e-310
Identity = 529/536 (98.69%), Postives = 532/536 (99.25%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
MVKDALQFLAYLRRISRFPSPFTCNKLLHSL+NSGCGELSAKLLFHFLSKGYSPHPSSFN
Sbjct: 1 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLVNSGCGELSAKLLFHFLSKGYSPHPSSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLL GFCVNYQIRKACFLVNRVRGS
Sbjct: 61 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLXGFCVNYQIRKACFLVNRVRGS 120
Query: 125 ELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMGN 184
ELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMGN
Sbjct: 121 ELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMGN 180
Query: 185 GMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGC 244
GMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGC
Sbjct: 181 GMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGC 240
Query: 245 CKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIRLDL 304
CKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVD ATKYINRMFDR+IRLDL
Sbjct: 241 CKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDDATKYINRMFDREIRLDL 300
Query: 305 TAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYRK 364
TAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSY+K
Sbjct: 301 TAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYQK 360
Query: 365 LLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE 424
LLARGFE DAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE
Sbjct: 361 LLARGFEPDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE 420
Query: 425 RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM 484
RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM
Sbjct: 421 RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM 480
Query: 485 AEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMRKRGI 541
AEKGLMIEAKQVFEDMLNKGITPDSVA NILIRGYHKLGNEAAILGLHDEMRKRGI
Sbjct: 481 AEKGLMIEAKQVFEDMLNKGITPDSVACNILIRGYHKLGNEAAILGLHDEMRKRGI 536
BLAST of MS009008 vs. ExPASy TrEMBL
Match:
A0A6J1K3Y4 (pentatricopeptide repeat-containing protein At2g01740 OS=Cucurbita maxima OX=3661 GN=LOC111490957 PE=4 SV=1)
HSP 1 Score: 930.6 bits (2404), Expect = 2.9e-267
Identity = 447/536 (83.40%), Postives = 498/536 (92.91%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
MVK+ALQFLA+LRRISRFPSPFTCNKL+HSLINSGCGELSAK+LFHFLSKGY+PH SSFN
Sbjct: 1 MVKEALQFLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
SIISFFC+LG +++A++IL+SMPRFGCSPDIVSYNSLL G+C +Y+IR+ACFLVNRVRG
Sbjct: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREACFLVNRVRGG 120
Query: 125 ELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMGN 184
L+PDLVMFNILFNGFAKVYMK EAFMYLGLMWK CLPNVVTYGT +DMFCKMGDME+GN
Sbjct: 121 LLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGN 180
Query: 185 GMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGC 244
MF DM+KVGVVPN VAFSSLIDGYCKAGSL++AF Y E+M++CSVQPNEFTY+TLIDGC
Sbjct: 181 KMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLNVAFGYLERMQQCSVQPNEFTYSTLIDGC 240
Query: 245 CKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIRLDL 304
CKQGML RAD LFE+ML+VGI PNCTV+TSIIDGHFKKGNVD A KYINRMFDR+I LDL
Sbjct: 241 CKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIELDL 300
Query: 305 TAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYRK 364
TAYTVVI+GFRRVGRL KAMEAAE+VVKNGLLPD IILTAIMD+HFKAGNLKEALN+YR
Sbjct: 301 TAYTVVIAGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRI 360
Query: 365 LLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE 424
LLARGFE D +TLS L+DGLCK+GY+QEARRY+++EKANE+LYTVLIDALCKEG+LDE E
Sbjct: 361 LLARGFEPDTVTLSALIDGLCKNGYLQEARRYVVKEKANEILYTVLIDALCKEGNLDEAE 420
Query: 425 RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM 484
R I+EM EAGFVPDKYVYTSWIAELCKQG+LLKAF +KKRMV+E+IEPDLLTYSSLI G+
Sbjct: 421 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 480
Query: 485 AEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMRKRGI 541
AEKGLMIEAKQVF+DMLN GITPDSVAY+ILIRGYH GN AI GLHDEMR RGI
Sbjct: 481 AEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISGLHDEMRTRGI 536
BLAST of MS009008 vs. ExPASy TrEMBL
Match:
A0A6J1FRV7 (pentatricopeptide repeat-containing protein At2g01740 OS=Cucurbita moschata OX=3662 GN=LOC111447887 PE=4 SV=1)
HSP 1 Score: 919.8 bits (2376), Expect = 5.1e-264
Identity = 442/536 (82.46%), Postives = 493/536 (91.98%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
MVK+ALQ LA+LRRISRFPSPFTCNKL+HSLINSGCGELSAK+LFHFLSKGY+PH SSFN
Sbjct: 1 MVKEALQCLAHLRRISRFPSPFTCNKLVHSLINSGCGELSAKVLFHFLSKGYTPHSSSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
SIISFFC+LG +++A++IL+SMPRFGCSPDIVSYNSLL G+C +Y+IR+ CFLVNR+R
Sbjct: 61 SIISFFCKLGNIKYAERILNSMPRFGCSPDIVSYNSLLHGYCASYKIREVCFLVNRLRRG 120
Query: 125 ELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMGN 184
L+PDLVMFNILFNGFAKVYMK EAFMYLGLMWK CLPNVVTYGT +DMFCKMGDME+GN
Sbjct: 121 VLNPDLVMFNILFNGFAKVYMKNEAFMYLGLMWKSCLPNVVTYGTLVDMFCKMGDMEVGN 180
Query: 185 GMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGC 244
MF DM+KVGVVPN VAFSSLIDGYCKAGSLD+AF Y E+M++CSVQPNEFTY+TLIDGC
Sbjct: 181 KMFFDMMKVGVVPNLVAFSSLIDGYCKAGSLDVAFGYLERMQQCSVQPNEFTYSTLIDGC 240
Query: 245 CKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIRLDL 304
CKQGML RAD LFE+ML+VGI PNCTV+TSIIDGHFKKGNVD A KYINRMFDR+I LDL
Sbjct: 241 CKQGMLERADFLFEEMLSVGILPNCTVHTSIIDGHFKKGNVDNALKYINRMFDREIGLDL 300
Query: 305 TAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYRK 364
TAYTVVISGFRRVGRL KAMEAAE+VVKNGLLPD IILTAIMD+HFKAGNLKEALN+YR
Sbjct: 301 TAYTVVISGFRRVGRLHKAMEAAENVVKNGLLPDRIILTAIMDVHFKAGNLKEALNAYRM 360
Query: 365 LLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEVE 424
LLARGFE D +TLS L+DGLCK+GY+ EAR+Y+++EKANE+LYTV IDALCKEG+LDE E
Sbjct: 361 LLARGFEPDTVTLSALIDGLCKNGYLPEARQYVVKEKANEILYTVFIDALCKEGNLDEAE 420
Query: 425 RIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGM 484
R I+EM EAGFVPDKYVYTSWIAELCKQG+LLKAF +KKRMV+E+IEPDLLTYSSLI G+
Sbjct: 421 RTIKEMCEAGFVPDKYVYTSWIAELCKQGNLLKAFTVKKRMVQENIEPDLLTYSSLIGGL 480
Query: 485 AEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMRKRGI 541
AEKGLMIEAKQVF+DMLN GITPDSVAY+ILIRGYH GN AI GLHDEMR RGI
Sbjct: 481 AEKGLMIEAKQVFDDMLNAGITPDSVAYDILIRGYHNQGNVVAISGLHDEMRTRGI 536
BLAST of MS009008 vs. ExPASy TrEMBL
Match:
A0A1S3BUW7 (pentatricopeptide repeat-containing protein At2g01740 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103493450 PE=4 SV=1)
HSP 1 Score: 903.7 bits (2334), Expect = 3.8e-259
Identity = 436/537 (81.19%), Postives = 487/537 (90.69%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
MVK+ALQFLA+LRRISRFPSPFTCNKLLHSLINSGCG LSAKLL H LSKGY+PHPSSFN
Sbjct: 1 MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
SIISFFCR G V+FA+QI SM RFGCSPDIVSYNSLLDG+C + QI+KACFLVNRVRG
Sbjct: 61 SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120
Query: 125 ELS-PDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMG 184
EL+ PDLVMFNILF GFAKVYMK EAFMYLGLMWK+ LP++VTYGTF+DMFCKMGDMEMG
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180
Query: 185 NGMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDG 244
N MFLDM+KVG+VPN + FSSLIDGYCKAGSLD+AF+YFE+M+ECSV+PNEFTY+TLIDG
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240
Query: 245 CCKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIRLD 304
C K+GML RAD LFEKML+ I PNCTVYTSIIDGHFKKGNVD A KYIN+MFD+ I+LD
Sbjct: 241 CSKRGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDQDIKLD 300
Query: 305 LTAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYR 364
LTAYTV+ISGF RVGR K+MEAAE V K GLLPD IILTAIMD+HFKAGN+KEALN+Y+
Sbjct: 301 LTAYTVIISGFHRVGRFDKSMEAAEYVAKKGLLPDRIILTAIMDVHFKAGNIKEALNAYK 360
Query: 365 KLLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLDEV 424
LLA+GFE D TLS LMDGL KHGY+Q+ARRY ++EKANE+LYTV IDALCKEG+LDE
Sbjct: 361 ILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDALCKEGNLDEA 420
Query: 425 ERIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICG 484
E++I+EMSEAGFVPDK+VYTS IAELCKQG+LLKAF++KKRMV+EHIEPDLLTYSSLI G
Sbjct: 421 EKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPDLLTYSSLISG 480
Query: 485 MAEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMRKRGI 541
+AEKGLMIEAKQVF+DMLNKGITPD VAY+ILIRGYH GN AAI GLHDEMRKRGI
Sbjct: 481 LAEKGLMIEAKQVFDDMLNKGITPDFVAYDILIRGYHNQGNGAAISGLHDEMRKRGI 537
BLAST of MS009008 vs. ExPASy TrEMBL
Match:
A0A1S3BTQ4 (pentatricopeptide repeat-containing protein At2g01740 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493450 PE=4 SV=1)
HSP 1 Score: 872.5 bits (2253), Expect = 9.4e-250
Identity = 436/607 (71.83%), Postives = 487/607 (80.23%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
MVK+ALQFLA+LRRISRFPSPFTCNKLLHSLINSGCG LSAKLL H LSKGY+PHPSSFN
Sbjct: 1 MVKEALQFLAHLRRISRFPSPFTCNKLLHSLINSGCGHLSAKLLIHLLSKGYTPHPSSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
SIISFFCR G V+FA+QI SM RFGCSPDIVSYNSLLDG+C + QI+KACFLVNRVRG
Sbjct: 61 SIISFFCRSGNVKFAEQIFISMSRFGCSPDIVSYNSLLDGYCSSCQIQKACFLVNRVRGC 120
Query: 125 ELS-PDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDMEMG 184
EL+ PDLVMFNILF GFAKVYMK EAFMYLGLMWK+ LP++VTYGTF+DMFCKMGDMEMG
Sbjct: 121 ELNRPDLVMFNILFKGFAKVYMKNEAFMYLGLMWKYYLPSIVTYGTFVDMFCKMGDMEMG 180
Query: 185 NGMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYAT---- 244
N MFLDM+KVG+VPN + FSSLIDGYCKAGSLD+AF+YFE+M+ECSV+PNEFTY+T
Sbjct: 181 NRMFLDMMKVGIVPNLIVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTLIDG 240
Query: 245 ------------------------------------------------------------ 304
Sbjct: 241 CSKRGMLARADSLFEKMLSASILPNCTVFSSLIDGYCKAGNLDVAFEYFEKMKECSVRPN 300
Query: 305 ------LIDGCCKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYIN 364
LIDGC K+GML RAD LFEKML+ I PNCTVYTSIIDGHFKKGNVD A KYIN
Sbjct: 301 EFTYSRLIDGCSKRGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYIN 360
Query: 365 RMFDRKIRLDLTAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAG 424
+MFD+ I+LDLTAYTV+ISGF RVGR K+MEAAE V K GLLPD IILTAIMD+HFKAG
Sbjct: 361 QMFDQDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKKGLLPDRIILTAIMDVHFKAG 420
Query: 425 NLKEALNSYRKLLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDA 484
N+KEALN+Y+ LLA+GFE D TLS LMDGL KHGY+Q+ARRY ++EKANE+LYTV IDA
Sbjct: 421 NIKEALNAYKILLAKGFEADVATLSALMDGLSKHGYLQKARRYFVKEKANEILYTVFIDA 480
Query: 485 LCKEGSLDEVERIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPD 541
LCKEG+LDE E++I+EMSEAGFVPDK+VYTS IAELCKQG+LLKAF++KKRMV+EHIEPD
Sbjct: 481 LCKEGNLDEAEKMIKEMSEAGFVPDKFVYTSLIAELCKQGNLLKAFMVKKRMVQEHIEPD 540
BLAST of MS009008 vs. TAIR 10
Match:
AT2G01740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 592.0 bits (1525), Expect = 4.7e-169
Identity = 282/539 (52.32%), Postives = 391/539 (72.54%), Query Frame = 0
Query: 5 MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFN 64
MV++ALQFL+ LR+ S P PFTCNK +H LINS CG LS K L + +S+GY+PH SSFN
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 65 SIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGS 124
S++SF C+LG+V+FA+ I+HSMPRFGC PD++SYNSL+DG C N IR A ++ +R S
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 125 E---LSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDME 184
PD+V FN LFNGF+K+ M E F+Y+G+M K C PNVVTY T+ID FCK G+++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 185 MGNGMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLI 244
+ F M + + PN V F+ LIDGYCKAG L++A +++M + N TY LI
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 245 DGCCKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIR 304
DG CK+G + RA+ ++ +M+ + PN VYT+IIDG F++G+ D A K++ +M ++ +R
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 305 LDLTAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNS 364
LD+TAY V+ISG G+L++A E ED+ K+ L+PD +I T +M+ +FK+G +K A+N
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 365 YRKLLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSLD 424
Y KL+ RGFE D + LST++DG+ K+G + EA Y EKAN+V+YTVLIDALCKEG
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420
Query: 425 EVERIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLI 484
EVER+ ++SEAG VPDK++YTSWIA LCKQG+L+ AF +K RMV+E + DLL Y++LI
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 485 CGMAEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMRKRGI 541
G+A KGLM+EA+QVF++MLN GI+PDS +++LIR Y K GN AA L +M++RG+
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
BLAST of MS009008 vs. TAIR 10
Match:
AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 298.1 bits (762), Expect = 1.4e-80
Identity = 168/530 (31.70%), Postives = 278/530 (52.45%), Query Frame = 0
Query: 1 IHLRMVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHP 60
I L M+++A+Q + ++R FP +CN LLH G + + + G P
Sbjct: 203 IDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTV 262
Query: 61 SSFNSIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNR 120
++N +I C+ G VE A+ + M G PD V+YNS++DGF ++
Sbjct: 263 FTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 121 VRGSELSPDLVMFNILFNGFAKV-YMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGD 180
++ PD++ +N L N F K + Y + PNVV+Y T +D FCK G
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 181 MEMGNGMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYAT 240
M+ ++DM +VG+VPN ++SLID CK G+L AF+ +M + V+ N TY
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 241 LIDGCCKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRK 300
LIDG C + A+ LF KM G+ PN Y ++I G K N+D A + +N + R
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 301 IRLDLTAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEAL 360
I+ DL Y I G + +++ A ++ + G+ + +I T +MD +FK+GN E L
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 361 NSYRKLLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIR------EKANEVLYTVLIDA 420
+ ++ E+ +T L+DGLCK+ V +A Y R +AN ++T +ID
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDG 622
Query: 421 LCKEGSLDEVERIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPD 480
LCK+ ++ + E+M + G VPD+ YTS + KQG++L+A ++ +M ++ D
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 481 LLTYSSLICGMAEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLG 524
LL Y+SL+ G++ + +A+ E+M+ +GI PD V +++ +++LG
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELG 732
BLAST of MS009008 vs. TAIR 10
Match:
AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 257.7 bits (657), Expect = 2.1e-68
Identity = 158/547 (28.88%), Postives = 267/547 (48.81%), Query Frame = 0
Query: 1 IHLR--MVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSP 60
++LR M++D+L+ + PS +TCN +L S++ SG L L + P
Sbjct: 172 VYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICP 231
Query: 61 HPSSFNSIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLV 120
++FN +I+ C G E + ++ M + G +P IV+YN++L +C + + A L+
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELL 291
Query: 121 NRVRGSELSPDLVMFNILFNGFAKVYMKREAFMYLGLMWKFCL-PNVVTYGTFIDMFCKM 180
+ ++ + D+ +N+L + + + ++ L M K + PN VTY T I+ F
Sbjct: 292 DHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNE 351
Query: 181 GDMEMGNGMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTY 240
G + + + + +M+ G+ PN V F++LIDG+ G+ A + F ME + P+E +Y
Sbjct: 352 GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSY 411
Query: 241 ATLIDGCCKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFD 300
L+DG CK A + +M G+ YT +IDG K G +D A +N M
Sbjct: 412 GVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 301 RKIRLDLTAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKE 360
I D+ Y+ +I+GF +VGR + A E + + GL P+GII + ++ + G LKE
Sbjct: 472 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 361 ALNSYRKLLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKA-----NEVLYTVLID 420
A+ Y ++ G D T + L+ LCK G V EA ++ + N V + LI+
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Query: 421 ALCKEGSLDEVERIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEP 480
G + + +EM++ G P + Y S + LCK G L +A K +
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 651
Query: 481 DLLTYSSLICGMAEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLH 540
D + Y++L+ M + G + +A +F +M+ + I PDS Y LI G + G +
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711
BLAST of MS009008 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 253.4 bits (646), Expect = 4.0e-67
Identity = 160/554 (28.88%), Postives = 268/554 (48.38%), Query Frame = 0
Query: 3 LRMVKDALQFLAYLRRISRFPSPFTCNKLLHSLINSGCGELSAKLLF-HFLSKGYSPHPS 62
L ++ AL + + P + N +L + I S A+ +F L SP+
Sbjct: 147 LSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVF 206
Query: 63 SFNSIISFFCRLGRVEFAQQILHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRV 122
++N +I FC G ++ A + M GC P++V+YN+L+DG+C +I L+ +
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 123 RGSELSPDLVMFNILFNGFAKV-YMKREAFMYLGLMWKFCLPNVVTYGTFIDMFCKMGDM 182
L P+L+ +N++ NG + MK +F+ + + + VTY T I +CK G+
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 183 EMGNGMFLDMVKVGVVPNFVAFSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATL 242
M +M++ G+ P+ + ++SLI CKAG+++ A ++ ++M + PNE TY TL
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 243 IDGCCKQGMLGRADLLFEKMLNVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKI 302
+DG ++G + A + +M + G SP+ Y ++I+GH G ++ A + M ++ +
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 303 RLDLTAYTVVISGFRRVGRLQKAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALN 362
D+ +Y+ V+SGF R + +A+ ++V+ G+ PD I ++++ + KEA +
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 363 SYRKLLARGFELDAMTLSTLMDGLCKHGYVQEARRYLIREKANEVLYTVLIDALCKEGSL 422
Y ++L G D T YT LI+A C EG L
Sbjct: 507 LYEEMLRVGLPPDEFT------------------------------YTALINAYCMEGDL 566
Query: 423 DEVERIIEEMSEAGFVPDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYS-- 482
++ ++ EM E G +PD Y+ I L KQ +A + ++ E P +TY
Sbjct: 567 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 626
Query: 483 -------------SLICGMAEKGLMIEAKQVFEDMLNKGITPDSVAYNILIRGYHKLGNE 540
SLI G KG+M EA QVFE ML K PD AYNI+I G+ + G+
Sbjct: 627 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDI 670
BLAST of MS009008 vs. TAIR 10
Match:
AT1G63330.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 251.5 bits (641), Expect = 1.5e-66
Identity = 153/520 (29.42%), Postives = 260/520 (50.00%), Query Frame = 0
Query: 23 PSPFTCNKLLHSLINSGCGELSAKLLFHFLSKGYSPHPSSFNSIISFFCRLGRVEFAQQI 82
PS F NKLL ++ +L L G S + ++N +I+ FCR ++ A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 83 LHSMPRFGCSPDIVSYNSLLDGFCVNYQIRKACFLVNRVRGSELSPDLVMFNILFNGFAK 142
L M + G P IV+ +SLL+G+C +I A LV+++ PD + F L +G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 143 VYMKREAFMYLG-LMWKFCLPNVVTYGTFIDMFCKMGDMEMGNGMFLDMVKVGVVPNFVA 202
EA + ++ + C PN+VTYG ++ CK GD+++ + M + + V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 203 FSSLIDGYCKAGSLDIAFQYFEKMEECSVQPNEFTYATLIDGCCKQGMLGRADLLFEKML 262
F+++ID CK +D A F++ME ++PN TY++LI C G A L M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 263 NVGISPNCTVYTSIIDGHFKKGNVDAATKYINRMFDRKIRLDLTAYTVVISGFRRVGRLQ 322
I+PN + ++ID K+G A K + M R I D+ Y +I+GF RL
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 323 KAMEAAEDVVKNGLLPDGIILTAIMDLHFKAGNLKEALNSYRKLLARGFELDAMTLSTLM 382
KA + E +V PD ++ K+ +++ +R++ RG D +T +TL+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 383 DGLCKHGYVQEARRYLIREKANEV-----LYTVLIDALCKEGSLDEVERIIEEMSEAGFV 442
GL G A++ + ++ V Y++L+D LC G L++ + + M ++
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 443 PDKYVYTSWIAELCKQGDLLKAFLIKKRMVREHIEPDLLTYSSLICGMAEKGLMIEAKQV 502
D Y+YT+ I +CK G + + + + + ++P+++TY+++I G+ K L+ EA +
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 503 FEDMLNKGITPDSVAYNILIRGYHKLGNEAAILGLHDEMR 537
+ M G PDS YN LIR + + G++AA L EMR
Sbjct: 488 LKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022146877.1 | 4.1e-310 | 98.69 | pentatricopeptide repeat-containing protein At2g01740 [Momordica charantia] | [more] |
XP_023537260.1 | 4.6e-267 | 83.58 | pentatricopeptide repeat-containing protein At2g01740 [Cucurbita pepo subsp. pep... | [more] |
XP_022995400.1 | 6.0e-267 | 83.40 | pentatricopeptide repeat-containing protein At2g01740 [Cucurbita maxima] >XP_022... | [more] |
XP_038891429.1 | 1.9e-265 | 82.68 | pentatricopeptide repeat-containing protein At2g01740 [Benincasa hispida] >XP_03... | [more] |
XP_022943027.1 | 1.1e-263 | 82.46 | pentatricopeptide repeat-containing protein At2g01740 [Cucurbita moschata] >XP_0... | [more] |
Match Name | E-value | Identity | Description | |
Q9ZUA2 | 6.6e-168 | 52.32 | Pentatricopeptide repeat-containing protein At2g01740 OS=Arabidopsis thaliana OX... | [more] |
P0C894 | 2.0e-79 | 31.70 | Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th... | [more] |
Q9LVQ5 | 3.0e-67 | 28.88 | Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 5.6e-66 | 28.88 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9C8T7 | 2.1e-65 | 29.42 | Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1D0T3 | 2.0e-310 | 98.69 | pentatricopeptide repeat-containing protein At2g01740 OS=Momordica charantia OX=... | [more] |
A0A6J1K3Y4 | 2.9e-267 | 83.40 | pentatricopeptide repeat-containing protein At2g01740 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1FRV7 | 5.1e-264 | 82.46 | pentatricopeptide repeat-containing protein At2g01740 OS=Cucurbita moschata OX=3... | [more] |
A0A1S3BUW7 | 3.8e-259 | 81.19 | pentatricopeptide repeat-containing protein At2g01740 isoform X4 OS=Cucumis melo... | [more] |
A0A1S3BTQ4 | 9.4e-250 | 71.83 | pentatricopeptide repeat-containing protein At2g01740 isoform X2 OS=Cucumis melo... | [more] |
Match Name | E-value | Identity | Description | |
AT2G01740.1 | 4.7e-169 | 52.32 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G02150.1 | 1.4e-80 | 31.70 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G55840.1 | 2.1e-68 | 28.88 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 4.0e-67 | 28.88 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G63330.1 | 1.5e-66 | 29.42 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |