
MS008993 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCCGCATCAATGGCGGCGCACCGCAACGGCGCACCAGTTCCCCTAGACGCTCAGAAGCAGACGCTCCTCAACCACCACACCGAGAGGCACTTCACCGCCGGCGAGATCGTCCGCGATATCATCATCGGCGTCTCCGACGGCCTCACCGTCCCTTTCGCCCTCGCCGCCGGCCTTTCCGGCGCCAACGCCTCCTCCTCCATCGTCCTCACCGCCGGCATCGCTGAAGTCGCCGCCGGCGCTATCTCCATGGGACTCGGCGGGTGCGTGCCTTTGATCCATCACCATTAATTACATTTACGTTTTAACCTAATTAATCGATTTCGATTTCGAGATCTGGATTTAAGTTTTTTTGTTTTTGTTTGTTCTTCTGTAATTTGCTGAATAGAATCGGCAATTCGTTTGGAATTTGTGCGTAGATATCTCGCGGCGAAAAGCGAAGCGGATCACTACACGAGAGAATTGCGGAGAGAACAAGAAGAAATCGTCGCGGTTCCCGATACTGGTGCCGATTCCTTTACTTTCTCCTTCTTTCTTCTTTCTTGTTTTTTTAAACAAATTTAATTTGAAATCAAGTTAATTATAGTATCATCGACTAAATGGATTTAAAAGGAAAAAAAAAACTTAATTTCGAAGATTTGTTCTTGAAATATGACTAGGGGTAGTTTCGGTATATTCATTTTAAAATGACTTTTGAAGTAAAAAATAAATAAAATATTTTTCAAAAATAAAAAGTAGTTAAATTACCCATTTTTAGGACATGATGTGTAGATGAGAAATTGAACTAACTTCTTGATTTGAGATACATGATCCTGTATATTGTCGATTTGAATTTGATCTCTGGTTCTAATAAAAAATTAATTTACACTTTGTAACTTCGTTAAGTTTCTCAAAATGTTTTTTTTAGATTTACTAAATATTGATAGCTTTTAGATTTTTTTCTTTGGACACGAACCCAATGAGGGGGGAAATTTTAAATTTTTAGAAAAATTTTACTCCATAACATAAATTTAATATTTATTATGTAGTTTAAAAAATATCACGACTCACTTTTGTAAAAATATATATTATATATTTGACCTTTTCATGCGTATTTCACATCAAATTTAAGTTGCTTTTAATTTGGAATTTTGGATTATACTCTTTCTAAAAAATTTTAATTTTCTGCTATATTTGAAAATTTATGCTATTAATATAAATGCTTGATAAAAATAGTTTTGAAGAATGATTGTAAAGAGACTAATTTAATTGTTTGAAGGGAAAAAAGAGGACTAGTTTATAACTGTATATATTGTAATTGAATGTGTATTTATAATAAAATAAAAAATGGGAATAAAAATGCAGAAGCGGCAGAAGTAGCAGAGATATTGGCGCAGTACGGGATAGAAGCCCATGAATATGGTCCGGTTGTGAATGCTCTTAGGAAGAGCCCTCAAGCTTGGTTGGATTTCATGATGAAGTAAGTAATTTCTTCTTTCCCCCTTAAAATCTCACATTTTTATAAATTTAAAAGCTTCACTATCACTATAAAAATAATCAACTATTATCTCATTTAAGATCGATGATTCGATTACTCACCTTTATATTTATTAGACACAAAATATCATATAAAAATATGAACTAATTAAATATTCTTTGTTGGACAAATGCCATAGAAATTAGGATGGTAAATTAAGTTTTTATTTTCTAATTTAAATAATTTTTATAAGTTTCTTGATTTTTTTTTTTTATGATTTCCTTAGAATATCTACCTTACCTACATTAATATTCTCCATAAATACCTTCCAATTTGAGATTTGTGCTTTGAAATTTAAATATTATCTATGATTGTTTTCCCTTTTGAGAACCTTCTTGGTTTTGATGTGAAATGACACACAGTAAGATTGAGTCTAAATATGACAAGTAAAGGAGTTGTTTTATTTATTTATTTATTACTGTGGAGTAGTTTGAAAAATTAGTTTATTTGCATATAAATATTTTGCGAATAGGCTAGAAATTCATTAGTAATATTTTTTTTTTAATAAATTCAAGATTGGATCAATGTTAAGGTGGAAAATAAATTTTCCAACCTTATCCCTCGAGACAAAATTATTTTTCATTTTTATTTTTTTGGAAAAAAACATTTTTAGGTTTTTGGTCTTTCATCCGCCAAAAGAACAAATTGAAAATTTTCCTAAATGTCTAGTAATATTTTTGCTTATGGTTTTTTATTGTAGAAACCATGTTTTAATATTTTAAAGAAAAATAGAATATTGTTAGATTTTTGGTAGCTATGACAAAGCTGGCATTTGCCTTTGCTATGAGACAAATTTCGTTCACCGCCAAAGAATATTGTTAGATTATTTGTTTAAAATGTAAAAATGGTTTTAACATAAGAACGGCGGATTTGATGACTATTTTACTTTTAGTTTTGTGTTTCTAAAAATTATTTGGTTCTTCACAGTTTTATGGATGTGTTTTTCCTCCTTCGTAAAATACATTGGAATTCTTAACTAAATTTCAATAAGAAAAACAAGTTTTCAAAATATGACTTAGATTTTACAACTTTTTCTAAAAGCAGATAACAAAGCAAAGAAATATATAAGTAGAAGTGTTTTAAAGTTAATTTTTAGAAATAAAAAATAAAGAAAGGAAATGGTTATCAAATGAAGACTACACAGTTTGCTTGCAGTTTCAATATATCTAAAACCAAATTACATTAAATAATTCTAAAGTTATTCTTGGTTGTTCGCCATTCTAAGCCTATCTCGTAAAAGGTCGGAGGTTCAAACAATAAAAGTTACTCTTGGTTCATCACTCTTAAAAAAATAATAATAAATCAAAAAATAAAAAGTGATTTTTATTTATTGTCACTTTTTTTTTTAACTTTTGACCCCTCGAAATCACTTCCAAATCATGCCAAGAATATTCTATATAGTCTTCAAATCTTATATCTTTTTTTCTTTTTATAAGTACAACAAATTGGAGGTAAGGAGGTTTGAATCTCTGACTTGAAAGGAAGGAATAGATGTCAATTAACGTTAAGTTATACTCATTTTGACAAATCGTATGCTAACCTCAACATAACCTAACGGTTAAGGTATTTATCTGTTACAAATGTTGTGAGTTTGAACTCCCACCCCCACATGTTGTAAAAATAAAAACATATAATTTCTGACTATATTATTAGGCGGTGGTGAATTTCTATATCCTATAAATTTGTCTAATAGCAAAAGCAAAGGCCAAGTTTGTAGTAGCTACCAAAAATCTAATTGAAGTTTCCACCATTTTGTTTTCTAAGTATCACGTGGACTCTGTGGAACAATCCAAAAAAGATTGACATCACAGTTCACAGCTGCATCCTCAAACATCCAAAACAAATATGGAAATTTGTTTCTTAAAGCAAAAGGCTTTATATTTGAGTTTTGACTCGCGATTTTAATTTTTAACAAGTCTATAACTATAAAATTTTGGGTTTAAAAGTCTAGATTTTGTGTTTAAATCGTTCAAAACAGTGAGCCATGAAAACTAAAGTCTATGAAATTGGAGTACTTTTTGGTAAACTTATGATTTGTAAAAGTTGGTCATTAATTTAGCAGAAATTGCTAACAGGGTTATTTTTAAAAAAAAATAGGTACAAAATTGAAACCAAAATAGGGATTAGGGGGCATTAGGTAATTTAGCCCATTAAATTCATAAGATTTAGTAACACCTCTAACTGCACTCATACAAATATATTTGTGTTCAATATTATCCTTTTATTTTTTATTCTTCTTTGAGTATCTAATAGCTAATTAACAGACAACAGTCTCTCATCTAGTAAATTTGTTATGTTTTAATTGAGTTTAAACTAGTATGTATCTTTTTAGTGCAATATTTAATATTTATAATACATTATAATACTGAACCATTAGGTACTTGTAAAACAAAGAATAAATTTTCTCAAAATTCTCTTTACTGGCTGTTTTTTTTTTTTTCTTTTTAATTTTGCATAGCACTATGCTATAAAGGTGTAACAATTTGTCAATAATGTTTCAGGGATAGGAAAGACTTCCCCACCCCATTTAATTTCTCATCCCCATGAAATTTTTCACGCATTTTATGCAGGAAATTCGCAGGGATTAGGTTTCTCATAGGAAAATTTTCCCTATTTATTTTTTTATTTTGTAAAATTATTTTCAATTAAATATTTCTTTCCAAAGGAATTTCTAATTAATTGCTAAATTTCTAATGATAAAATCTCACTTACACCTTCTAATCTTCCTCTGTATTTATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTCTTTTCTTTTTATATATATATATATATAATAATATGATTGTTTATTGAGGTGTGTATATATATTACAAAAAAGTGGGGCGGACAGAGAACAAGCTCGTCCCCGCCCCCATTTAGGTGACAGGGAATCTAAACGAAGATTCTTGGTCTCATTAGGCAGGTTTCTGTGGATCCATCTTTGCAGAGAAAATGAACATATCCGTAATTACATTACACAAACAACATTTACATATTACCTCATTTGTATTGTAATGTAACAATTCTTTGGAGGGAAAAAAAATCACCAAATGTAACAAAATTTTGCTGCCCTCTTTGGATGGGTAGATAGGTGTAATTGTATGCCACAAACATCACTAATTCACTGTCTAATGTCAAAGTGAAGTAATTCTCCTAACTGTTAGAACTGTGAGTTTTTCTGGTTCTTATGTTCAACATTTTTCCATTTCAATATTCATTTATGGTTTAATCTTTGTAGTGTTTGTGTGGTGATGTAGGTTTGAATTAGGACTGGAAAAACCAGATCCAAGAAGAGCTCTGCAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGGGGACTGGTGCCCCTCATTCCTTACATGTTTATTTCAAACACCACAGAAGCCGTGATAGCGTCGGTGGCATTGACGTTAGTAGCGTTGCTCGTGTTTGGGTATGCGAAGGGTTACTTTACGGGTAATAAGCCCTTCAAAAGCGCCATGCAAACCACCCTCGTCGGAGCTATTGCATCCGCAGCTGCTTTTGGCATGGCCAAGGCCATTCAACGA CTCTCCGCATCAATGGCGGCGCACCGCAACGGCGCACCAGTTCCCCTAGACGCTCAGAAGCAGACGCTCCTCAACCACCACACCGAGAGGCACTTCACCGCCGGCGAGATCGTCCGCGATATCATCATCGGCGTCTCCGACGGCCTCACCGTCCCTTTCGCCCTCGCCGCCGGCCTTTCCGGCGCCAACGCCTCCTCCTCCATCGTCCTCACCGCCGGCATCGCTGAAGTCGCCGCCGGCGCTATCTCCATGGGACTCGGCGGATATCTCGCGGCGAAAAGCGAAGCGGATCACTACACGAGAGAATTGCGGAGAGAACAAGAAGAAATCGTCGCGGTTCCCGATACTGAAGCGGCAGAAGTAGCAGAGATATTGGCGCAGTACGGGATAGAAGCCCATGAATATGGTCCGGTTGTGAATGCTCTTAGGAAGAGCCCTCAAGCTTGGTTGGATTTCATGATGAAGTTTGAATTAGGACTGGAAAAACCAGATCCAAGAAGAGCTCTGCAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGGGGACTGGTGCCCCTCATTCCTTACATGTTTATTTCAAACACCACAGAAGCCGTGATAGCGTCGGTGGCATTGACGTTAGTAGCGTTGCTCGTGTTTGGGTATGCGAAGGGTTACTTTACGGGTAATAAGCCCTTCAAAAGCGCCATGCAAACCACCCTCGTCGGAGCTATTGCATCCGCAGCTGCTTTTGGCATGGCCAAGGCCATTCAACGA CTCTCCGCATCAATGGCGGCGCACCGCAACGGCGCACCAGTTCCCCTAGACGCTCAGAAGCAGACGCTCCTCAACCACCACACCGAGAGGCACTTCACCGCCGGCGAGATCGTCCGCGATATCATCATCGGCGTCTCCGACGGCCTCACCGTCCCTTTCGCCCTCGCCGCCGGCCTTTCCGGCGCCAACGCCTCCTCCTCCATCGTCCTCACCGCCGGCATCGCTGAAGTCGCCGCCGGCGCTATCTCCATGGGACTCGGCGGATATCTCGCGGCGAAAAGCGAAGCGGATCACTACACGAGAGAATTGCGGAGAGAACAAGAAGAAATCGTCGCGGTTCCCGATACTGAAGCGGCAGAAGTAGCAGAGATATTGGCGCAGTACGGGATAGAAGCCCATGAATATGGTCCGGTTGTGAATGCTCTTAGGAAGAGCCCTCAAGCTTGGTTGGATTTCATGATGAAGTTTGAATTAGGACTGGAAAAACCAGATCCAAGAAGAGCTCTGCAAAGTGCTTTCACAATTGCATTGGCTTACATATTGGGGGGACTGGTGCCCCTCATTCCTTACATGTTTATTTCAAACACCACAGAAGCCGTGATAGCGTCGGTGGCATTGACGTTAGTAGCGTTGCTCGTGTTTGGGTATGCGAAGGGTTACTTTACGGGTAATAAGCCCTTCAAAAGCGCCATGCAAACCACCCTCGTCGGAGCTATTGCATCCGCAGCTGCTTTTGGCATGGCCAAGGCCATTCAACGA LSASMAAHRNGAPVPLDAQKQTLLNHHTERHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYTRELRREQEEIVAVPDTEAAEVAEILAQYGIEAHEYGPVVNALRKSPQAWLDFMMKFELGLEKPDPRRALQSAFTIALAYILGGLVPLIPYMFISNTTEAVIASVALTLVALLVFGYAKGYFTGNKPFKSAMQTTLVGAIASAAAFGMAKAIQR Homology
BLAST of MS008993 vs. NCBI nr
Match: XP_022146733.1 (vacuolar iron transporter 1-like [Momordica charantia]) HSP 1 Score: 466.8 bits (1200), Expect = 1.1e-127 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of MS008993 vs. NCBI nr
Match: XP_004142309.2 (vacuolar iron transporter 1 [Cucumis sativus] >KGN49613.1 hypothetical protein Csa_018505 [Cucumis sativus]) HSP 1 Score: 426.0 bits (1094), Expect = 2.2e-115 Identity = 228/252 (90.48%), Postives = 236/252 (93.65%), Query Frame = 0
BLAST of MS008993 vs. NCBI nr
Match: XP_016903246.1 (PREDICTED: uncharacterized protein LOC103502517 isoform X3 [Cucumis melo]) HSP 1 Score: 421.0 bits (1081), Expect = 7.2e-114 Identity = 222/241 (92.12%), Postives = 230/241 (95.44%), Query Frame = 0
BLAST of MS008993 vs. NCBI nr
Match: XP_008464695.2 (PREDICTED: uncharacterized protein LOC103502517 isoform X1 [Cucumis melo] >KAA0041023.1 vacuolar fusion protein CCZ1-like protein isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 421.0 bits (1081), Expect = 7.2e-114 Identity = 222/241 (92.12%), Postives = 230/241 (95.44%), Query Frame = 0
BLAST of MS008993 vs. NCBI nr
Match: XP_022990275.1 (vacuolar iron transporter 1 [Cucurbita maxima]) HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-113 Identity = 222/240 (92.50%), Postives = 228/240 (95.00%), Query Frame = 0
BLAST of MS008993 vs. ExPASy Swiss-Prot
Match: P0DO17 (Vacuolar iron transporter 1 OS=Eucalyptus grandis OX=71139 GN=VIT1 PE=1 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 5.2e-107 Identity = 206/248 (83.06%), Postives = 223/248 (89.92%), Query Frame = 0
BLAST of MS008993 vs. ExPASy Swiss-Prot
Match: Q9ZUA5 (Vacuolar iron transporter 1 OS=Arabidopsis thaliana OX=3702 GN=VIT1 PE=1 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 4.1e-104 Identity = 191/239 (79.92%), Postives = 219/239 (91.63%), Query Frame = 0
BLAST of MS008993 vs. ExPASy Swiss-Prot
Match: Q6MWE5 (Vacuolar iron transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=VIT1 PE=2 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 5.2e-99 Identity = 183/250 (73.20%), Postives = 220/250 (88.00%), Query Frame = 0
BLAST of MS008993 vs. ExPASy Swiss-Prot
Match: Q6ERE5 (Vacuolar iron transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=VIT2 PE=2 SV=2) HSP 1 Score: 346.7 bits (888), Expect = 2.3e-94 Identity = 179/237 (75.53%), Postives = 208/237 (87.76%), Query Frame = 0
BLAST of MS008993 vs. ExPASy Swiss-Prot
Match: P47818 (Protein CCC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CCC1 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.0e-33 Identity = 86/223 (38.57%), Postives = 136/223 (60.99%), Query Frame = 0
BLAST of MS008993 vs. ExPASy TrEMBL
Match: A0A6J1CZC1 (vacuolar iron transporter 1-like OS=Momordica charantia OX=3673 GN=LOC111015869 PE=3 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 5.6e-128 Identity = 247/249 (99.20%), Postives = 248/249 (99.60%), Query Frame = 0
BLAST of MS008993 vs. ExPASy TrEMBL
Match: A0A0A0KJ93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G025920 PE=3 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115 Identity = 228/252 (90.48%), Postives = 236/252 (93.65%), Query Frame = 0
BLAST of MS008993 vs. ExPASy TrEMBL
Match: A0A5A7TD07 (Vacuolar fusion protein CCZ1-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G002520 PE=3 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 3.5e-114 Identity = 222/241 (92.12%), Postives = 230/241 (95.44%), Query Frame = 0
BLAST of MS008993 vs. ExPASy TrEMBL
Match: A0A1S3CNM8 (uncharacterized protein LOC103502517 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502517 PE=3 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 3.5e-114 Identity = 222/241 (92.12%), Postives = 230/241 (95.44%), Query Frame = 0
BLAST of MS008993 vs. ExPASy TrEMBL
Match: A0A1S4E4U1 (uncharacterized protein LOC103502517 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502517 PE=3 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 3.5e-114 Identity = 222/241 (92.12%), Postives = 230/241 (95.44%), Query Frame = 0
BLAST of MS008993 vs. TAIR 10
Match: AT2G01770.1 (vacuolar iron transporter 1 ) HSP 1 Score: 379.0 bits (972), Expect = 2.9e-105 Identity = 191/239 (79.92%), Postives = 219/239 (91.63%), Query Frame = 0
BLAST of MS008993 vs. TAIR 10
Match: AT1G21140.1 (Vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 52.4 bits (124), Expect = 6.3e-07 Identity = 54/215 (25.12%), Postives = 90/215 (41.86%), Query Frame = 0
BLAST of MS008993 vs. TAIR 10
Match: AT1G76800.1 (Vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 52.0 bits (123), Expect = 8.2e-07 Identity = 55/244 (22.54%), Postives = 99/244 (40.57%), Query Frame = 0
BLAST of MS008993 vs. TAIR 10
Match: AT3G43660.1 (Vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 48.9 bits (115), Expect = 6.9e-06 Identity = 57/248 (22.98%), Postives = 100/248 (40.32%), Query Frame = 0
BLAST of MS008993 vs. TAIR 10
Match: AT3G43630.1 (Vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05 Identity = 54/215 (25.12%), Postives = 89/215 (41.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|