Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCGATGACTTAATCGTAGAACATTTATTGCTATGGAACCTCTGATTGAGCAATTTGATATGGATGTAACTCAAGAATACATATTTAAATCTTGTCTAAGAAGTGCCTCATGTGACACAAACACATAGCAACTGGTTACATTATTCCAATGATAATGATGTTGATGTTTGAAATGGGATATTATGATTCAGGAGTCGGTCAATCATCAAACTTTGGAACAAGATATTACAATTCAGAGGCAGATCCATCATCGTCAAACTTTGGGCAAGGATACTATGCTTTAGGGATCAATCCATCATCTTCATACATGCATGCATGGACACAGGCACTGTCGTGAAAAACATAATGAATATTTGTATTATGAAGCGCCTGCAGCGTTCTCGAACAACTATATCA
mRNA sequence
TGCGATGACTTAATCGTAGAACATTTATTGCTATGGAACCTCTGATTGAGCAATTTGATATGGATGTAACTCAAGAATACATATTTAAATCTTGTCTAAGAAGTGCCTCATGTGACACAAACACATAGCAACTGGTTACATTATTCCAATGATAATGATGTTGATGTTTGAAATGGGATATTATGATTCAGGAGTCGGTCAATCATCAAACTTTGGAACAAGATATTACAATTCAGAGGCAGATCCATCATCGTCAAACTTTGGGCAAGGATACTATGCTTTAGGGATCAATCCATCATCTTCATACATGCATGCATGGACACAGGCACTGTCGTGAAAAACATAATGAATATTTGTATTATGAAGCGCCTGCAGCGTTCTCGAACAACTATATCA
Coding sequence (CDS)
ATGATAATGATGTTGATGTTTGAAATGGGATATTATGATTCAGGAGTCGGTCAATCATCAAACTTTGGAACAAGATATTACAATTCAGAGGCAGATCCATCATCGTCAAACTTTGGGCAAGGATACTATGCTTTAGGGATCAATCCATCATCTTCATACATGCATGCATGGACACAGGCACTGTCGTGA
Protein sequence
MIMMLMFEMGYYDSGVGQSSNFGTRYYNSEADPSSSNFGQGYYALGINPSSSYMHAWTQALS
Homology
BLAST of MELO3C033698 vs. NCBI nr
Match:
KAA0047564.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK14961.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 85.9 bits (211), Expect = 1.3e-13
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0
Query: 1 MIMMLMFEMGYYDSGVGQSSNFGTRYYNSEADPSSSNFGQGYYALGINPSSSYMH 56
++MM F MGYYD VGQS +FGTRYYNSEADPSSSNFGQ YY LG NPSSSYMH
Sbjct: 50 VMMMSTFGMGYYDPEVGQSLDFGTRYYNSEADPSSSNFGQEYYDLGTNPSSSYMH 104
BLAST of MELO3C033698 vs. NCBI nr
Match:
KAA0050408.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa] >TYJ97999.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 78.2 bits (191), Expect = 2.8e-11
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0
Query: 1 MIMMLMFEMGYYDSGVGQSSNFGTRYYNSEADPSSSNFGQGYYALGINPSSSYMH 56
++MM F YYD GVGQSS+FGT YYNSEA PSSSNFGQ YY LG +PSSSYMH
Sbjct: 196 VMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMH 250
BLAST of MELO3C033698 vs. NCBI nr
Match:
TYK03402.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 74.3 bits (181), Expect = 4.1e-10
Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 1 MIMMLMFEMGYYDSGVGQSSNFGTRYYNSEADPSSSNFGQGYYALGINPSSSYMH 56
++MM F YYDSGVGQSS FG RYYNSE PSS++FGQ YY LG +PSSSYMH
Sbjct: 113 VVMMPTFGTIYYDSGVGQSSYFGRRYYNSEVGPSSTDFGQQYYDLGSDPSSSYMH 167
BLAST of MELO3C033698 vs. NCBI nr
Match:
KAA0050383.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 74.3 bits (181), Expect = 4.1e-10
Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 1 MIMMLMFEMGYYDSGVGQSSNFGTRYYNSEADPSSSNFGQGYYALGINPSSSYMH 56
++MM F YYDSGVGQSS FG RYYNSE PSS++FGQ YY LG +PSSSYMH
Sbjct: 118 VVMMPTFGTIYYDSGVGQSSYFGRRYYNSEVGPSSTDFGQQYYDLGSDPSSSYMH 172
BLAST of MELO3C033698 vs. NCBI nr
Match:
KAA0037866.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 73.9 bits (180), Expect = 5.3e-10
Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 1 MIMMLMFEMGYYDSGVGQSSNFGTRYYNSEADPSSSNFGQGYYALGINPSSSYMH 56
++MM F YYD GVGQSS+FG YYNSEA PSS++FGQ YY LG NPSSSYMH
Sbjct: 395 LMMMPTFGTTYYDLGVGQSSDFGRVYYNSEAGPSSTDFGQQYYDLGSNPSSSYMH 449
BLAST of MELO3C033698 vs. ExPASy TrEMBL
Match:
A0A5A7TX85 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00110 PE=4 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 6.5e-14
Identity = 43/55 (78.18%), Postives = 46/55 (83.64%), Query Frame = 0
Query: 1 MIMMLMFEMGYYDSGVGQSSNFGTRYYNSEADPSSSNFGQGYYALGINPSSSYMH 56
++MM F MGYYD VGQS +FGTRYYNSEADPSSSNFGQ YY LG NPSSSYMH
Sbjct: 50 VMMMSTFGMGYYDPEVGQSLDFGTRYYNSEADPSSSNFGQEYYDLGTNPSSSYMH 104
BLAST of MELO3C033698 vs. ExPASy TrEMBL
Match:
A0A5A7U558 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00220 PE=4 SV=1)
HSP 1 Score: 78.2 bits (191), Expect = 1.4e-11
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0
Query: 1 MIMMLMFEMGYYDSGVGQSSNFGTRYYNSEADPSSSNFGQGYYALGINPSSSYMH 56
++MM F YYD GVGQSS+FGT YYNSEA PSSSNFGQ YY LG +PSSSYMH
Sbjct: 196 VMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMH 250
BLAST of MELO3C033698 vs. ExPASy TrEMBL
Match:
A0A5D3BX46 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2679G00120 PE=4 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 2.0e-10
Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 1 MIMMLMFEMGYYDSGVGQSSNFGTRYYNSEADPSSSNFGQGYYALGINPSSSYMH 56
++MM F YYDSGVGQSS FG RYYNSE PSS++FGQ YY LG +PSSSYMH
Sbjct: 113 VVMMPTFGTIYYDSGVGQSSYFGRRYYNSEVGPSSTDFGQQYYDLGSDPSSSYMH 167
BLAST of MELO3C033698 vs. ExPASy TrEMBL
Match:
A0A5A7U3A2 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G001210 PE=4 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 2.0e-10
Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 1 MIMMLMFEMGYYDSGVGQSSNFGTRYYNSEADPSSSNFGQGYYALGINPSSSYMH 56
++MM F YYDSGVGQSS FG RYYNSE PSS++FGQ YY LG +PSSSYMH
Sbjct: 118 VVMMPTFGTIYYDSGVGQSSYFGRRYYNSEVGPSSTDFGQQYYDLGSDPSSSYMH 172
BLAST of MELO3C033698 vs. ExPASy TrEMBL
Match:
A0A5A7T6Q6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00300 PE=4 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 2.6e-10
Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0
Query: 1 MIMMLMFEMGYYDSGVGQSSNFGTRYYNSEADPSSSNFGQGYYALGINPSSSYMH 56
++MM F YYD GVGQSS+FG YYNSEA PSS++FGQ YY LG NPSSSYMH
Sbjct: 395 LMMMPTFGTTYYDLGVGQSSDFGRVYYNSEAGPSSTDFGQQYYDLGSNPSSSYMH 449
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0047564.1 | 1.3e-13 | 78.18 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
KAA0050408.1 | 2.8e-11 | 72.73 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
TYK03402.1 | 4.1e-10 | 69.09 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
KAA0050383.1 | 4.1e-10 | 69.09 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
KAA0037866.1 | 5.3e-10 | 69.09 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TX85 | 6.5e-14 | 78.18 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
A0A5A7U558 | 1.4e-11 | 72.73 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
A0A5D3BX46 | 2.0e-10 | 69.09 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
A0A5A7U3A2 | 2.0e-10 | 69.09 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
A0A5A7T6Q6 | 2.6e-10 | 69.09 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
Match Name | E-value | Identity | Description | |