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Lcy03g020690 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTGTTTCAGCTACTTCTCTCAGGTTCCAGCTACCGCCCAAGCCACATTCCAAGATTAACCAGGTTTTCCCCTTAATTTACAGTTGCATTGCTCTTTTCCTACTTCCCGGTGTGCTCAACACTTGCTCCATCTGTCCATTATATGTTATTTGTGTTATCAATTATAATTGATTATAATTTATTTAAGGAAGACGGCGGCGCCGATAGGGACTCCATGTTTTGGGGCCGTAGCTCCAACCGCTTACCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCAAAGCTCTGCTGTTGCAGCTGCCCCCAAATTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTATCACTGCCACTTCGTATCTTTCCTTCCTTTCTGTGGTTGCGCCTAATTTACATGTTAATTTTCTCGATCCTTGTAATGAAGCTCTCCTTTGGGCGAATATGTAGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAAGTATTTCTGTCCTGGTAATTTGCTTCCTTCTTCTTCATTTCTCAGGCTTGGATGATATTGACCTGTGTATTGTTATTTCTCTTCTTTCCAAACTTAATTTTGTATAATCTTCGAGCCTACCAGTTCAAATCAATTTCGAGAATTCCCTGGTCAATCGGATTATTTTACTGTTGACGTGGAATCGCCTTTTATTTTTAACTGAATAAGTTCCTGCTATTATCGTATACTCAAAACTTAAAAATGATATCTTCAAGAACCAAAGAAAGAGAACTTATAGAACATACAGTCCTCTTCTTGTCGGTGAAACCAACTTCAAATCATTTACATTCTGCTCCAATTCAATAAAGAAATTGAAATCTAATATAAATTATTATGCCTTGGCAGTTTGTGGTGCTCCTAAGCGACGATTTAGGCCTTATGAGCAATCTGTGACTAAAAATGCTAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAGAAAGATGAATCTATTGGGTAAGGCGGAAAATCAAATTACAGTCTTTATAAAAGATGCGTAGATTTTAATGAATATTTATTCAGTCTGACTGATATCACGTATAACGGTATAGGAAGGTGCTGCCTATTGCTGCAGCAGTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGTCTTTTAG ATGGCTTCTGTTTCAGCTACTTCTCTCAGGTTCCAGCTACCGCCCAAGCCACATTCCAAGATTAACCAGGAAGACGGCGGCGCCGATAGGGACTCCATGTTTTGGGGCCGTAGCTCCAACCGCTTACCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCAAAGCTCTGCTGTTGCAGCTGCCCCCAAATTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAAGTATTTCTGTCCTGTTTGTGGTGCTCCTAAGCGACGATTTAGGCCTTATGAGCAATCTGTGACTAAAAATGCTAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAGAAAGATGAATCTATTGGGAAGGTGCTGCCTATTGCTGCAGCAGTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGTCTTTTAG ATGGCTTCTGTTTCAGCTACTTCTCTCAGGTTCCAGCTACCGCCCAAGCCACATTCCAAGATTAACCAGGAAGACGGCGGCGCCGATAGGGACTCCATGTTTTGGGGCCGTAGCTCCAACCGCTTACCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGACGCAAAGCTCTGCTGTTGCAGCTGCCCCCAAATTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAAGTATTTCTGTCCTGTTTGTGGTGCTCCTAAGCGACGATTTAGGCCTTATGAGCAATCTGTGACTAAAAATGCTAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAGAAAGATGAATCTATTGGGAAGGTGCTGCCTATTGCTGCAGCAGTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGTCTTTTAG MASVSATSLRFQLPPKPHSKINQEDGGADRDSMFWGRSSNRLPLKSSFISPLRKIPSLRTQSSAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRPYEQSVTKNANEFDVRKARKAQIQKDESIGKVLPIAAAVGIVALVGLYLYLNSVF Homology
BLAST of Lcy03g020690 vs. ExPASy Swiss-Prot
Match: P04170 (Rubredoxin-1 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949 / MB) OX=525146 GN=rd1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05 Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0
BLAST of Lcy03g020690 vs. ExPASy Swiss-Prot
Match: O26258 (Probable rubredoxin OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=MTH_155 PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05 Identity = 23/56 (41.07%), Postives = 32/56 (57.14%), Query Frame = 0
BLAST of Lcy03g020690 vs. ExPASy Swiss-Prot
Match: P24297 (Rubredoxin OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=rub PE=1 SV=2) HSP 1 Score: 50.4 bits (119), Expect = 2.3e-05 Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0
BLAST of Lcy03g020690 vs. ExPASy Swiss-Prot
Match: Q9AL94 (Rubredoxin OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=rd PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.5e-04 Identity = 21/51 (41.18%), Postives = 27/51 (52.94%), Query Frame = 0
BLAST of Lcy03g020690 vs. ExPASy Swiss-Prot
Match: P58992 (Rubredoxin-1 OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) OX=194439 GN=rub1 PE=3 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 4.3e-04 Identity = 19/50 (38.00%), Postives = 28/50 (56.00%), Query Frame = 0
BLAST of Lcy03g020690 vs. ExPASy TrEMBL
Match: A0A6J1E6B5 (uncharacterized protein LOC111429830 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429830 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 4.7e-78 Identity = 153/172 (88.95%), Postives = 157/172 (91.28%), Query Frame = 0
BLAST of Lcy03g020690 vs. ExPASy TrEMBL
Match: A0A6J1JG21 (uncharacterized protein LOC111484793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484793 PE=4 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 7.9e-78 Identity = 150/171 (87.72%), Postives = 155/171 (90.64%), Query Frame = 0
BLAST of Lcy03g020690 vs. ExPASy TrEMBL
Match: A0A6J1E1X1 (uncharacterized protein LOC111429830 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429830 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 2.0e-76 Identity = 149/169 (88.17%), Postives = 154/169 (91.12%), Query Frame = 0
BLAST of Lcy03g020690 vs. ExPASy TrEMBL
Match: A0A5A7UPF0 (Rubredoxin family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00170 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 3.3e-76 Identity = 149/172 (86.63%), Postives = 159/172 (92.44%), Query Frame = 0
BLAST of Lcy03g020690 vs. ExPASy TrEMBL
Match: A0A6J1JDC8 (uncharacterized protein LOC111484793 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484793 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 3.3e-76 Identity = 146/168 (86.90%), Postives = 152/168 (90.48%), Query Frame = 0
BLAST of Lcy03g020690 vs. NCBI nr
Match: XP_023516579.1 (uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 301.2 bits (770), Expect = 5.6e-78 Identity = 151/171 (88.30%), Postives = 156/171 (91.23%), Query Frame = 0
BLAST of Lcy03g020690 vs. NCBI nr
Match: XP_022921625.1 (uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]) HSP 1 Score: 300.4 bits (768), Expect = 9.6e-78 Identity = 153/172 (88.95%), Postives = 157/172 (91.28%), Query Frame = 0
BLAST of Lcy03g020690 vs. NCBI nr
Match: XP_022987160.1 (uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima]) HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77 Identity = 150/171 (87.72%), Postives = 155/171 (90.64%), Query Frame = 0
BLAST of Lcy03g020690 vs. NCBI nr
Match: KAG6589344.1 (hypothetical protein SDJN03_14767, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 298.5 bits (763), Expect = 3.7e-77 Identity = 149/167 (89.22%), Postives = 153/167 (91.62%), Query Frame = 0
BLAST of Lcy03g020690 vs. NCBI nr
Match: XP_023516580.1 (uncharacterized protein LOC111780418 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 295.8 bits (756), Expect = 2.4e-76 Identity = 147/168 (87.50%), Postives = 153/168 (91.07%), Query Frame = 0
BLAST of Lcy03g020690 vs. TAIR 10
Match: AT5G51010.1 (Rubredoxin-like superfamily protein ) HSP 1 Score: 169.5 bits (428), Expect = 2.4e-42 Identity = 86/144 (59.72%), Postives = 108/144 (75.00%), Query Frame = 0
BLAST of Lcy03g020690 vs. TAIR 10
Match: AT5G17170.1 (rubredoxin family protein ) HSP 1 Score: 55.5 bits (132), Expect = 5.0e-08 Identity = 25/62 (40.32%), Postives = 35/62 (56.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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