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Csor.00g310820 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTACCTTCTAAATTTCTACTCATTCACTGCCTCCTTTGTTTAAGTTTCTTCCTCCTAGGCCTCATTTTTGTGTTTCTCTTTCCTTGCGGTGGTTAGGGTATTGATCTTGTAGCGGGAGGTAAGAGCAAGAAGACCAAGAGGACCGCGCCCAAATCTGATGATATCTACCTCAACTTACTCGTCAAGGTACTTCCTAAGCGCGATTTCCCATTCATAGCCACTTTCGTTTCATCTACCGGTGCTTAAAAATATAATATGCTTGATTTTTGAAGGGTTTGCTTTATTTTGGTTCTTGATTGCGGAGCTTGTGTAAATATAGTATTGTGTTCAAATGTCTACATTGAAAGTCAATTGAAATGCCCCTCGGTTGGTTTTTTTCGGGTTCTTATATAAGTCATTTTTTCCCCCTTATTTGATTCTCCCTCTATATTTCTTGTGCTCGTCTAATCTGTTTGTGGATGCCTAATTTTGTTTTTCGAATGAATTGGTTCGATGCTGGTCTTTCTGCTTTGATGATATCTGTGAATCCCAGCTCATGATGAGACCTTTCGTAGGTCGGGGAATAGTCTTTACCCACAATATCTGAGCCTTAAGTCCAGTTACATTGTCTTTATTTTCATTTTAACTATTATCAGTAACATGTTTTCGCTGTTGAAGTTAGTTCGTACACAAATGTTAGTGCCTTCTGTAACTGCGTTTGCATAGCTGTTCTTATGCTGCTACCTATATTATTTCCCTTCTTAGGCACTAAATGTAATTATGTATTAATAACAATATGCCATACTTTCAATCTTTTGTTTTGTTTCCTTCGGAAAGTTAAAAGGTTCCCAGTGATGATTAACTTGACCATGCTAATACTGATCACTTTGTGATTAATCTTTTCTTTAATAGTTCTGAGGGAACTGACTCCAAGGTTAAAGTTTTTGTGCTCATTTGCATTTGTTTCACTTGAGTGGGATGGGTGTACAGTGTATATCTTTGGTTCATGCTTTTGTTATTTTTTCCATACAAGTAGAAATATTTCTATGCAGGTCGATCATTATCTCCCTTCTGCAATGAAGCCCTTTTAAACTGTTCAATTTGTTGTTTCTTTTTTAGATCATAAGGACTCTGAACATATGCCTTTAGAATGTAAAGTTTTGTACTTTTTGGTTTGACTTTCTCTAGGAGTCTTCTAATCATGTCTGTTTATGTGCAATTTTGTAATATCTAATGTTAGTTCTCTATGTAATCTGGAAAGAGAAGCTTATTGTGTGGGCATTTTCTTGAATAGAGTCGTTCTGTTTGCCTTCAAAAACACATGTTTCACCTAACTTGTATTGACTAATGAAGTGATTTCTTGCTTTTCTTTTCAGCTCTACCGCTTCCTTGTTCGTCGTACTGGAAGCAATTTCAATGCTGTGATTCTCAAGCGATTGTTCATGAGCAGGGTCAACAAGCCTCCACTTTCTCTCTCTAGGCTTATCCAGTTCATGAAAGGAAAGGTTAGTTTCATCATGTAATATTGTAAGTTCATTTTGGTTGTTTGTAACTGATTGTGCATGCTGGGACGTCTAAAACCTCTTATATTTGTTGGTAATGTAATAGGAAAGCAAAATTGCCGTTGTTGTTGGGACTATTACTGATGATATTCGCGTCTATGAAGTTCCAGCATTGAAAGTTGCTGCTCTGAGATTTACAGAGACAGCAAGGGCAAGGATTGAGAAGGCTGGTGGGGAGTGTTTGACATTTGATCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTATGAATGTTTTCATGTTCCAAGTTATTTTTAGGCCACAACTTTCACATTCTTGATGAATGTGGGGAAAAATTAGAGAGTTTCAGGCTATGCCTTAGAGATGTATATAGGGATTTGAATAATCTGTTGGCTCCGTTTTTATTATTTTTGGGTTCATCTGCAGGTTCTCCTTAGAGGTTGTAAGAACTCCAGAGAGGCCGTGAAGCATTTTGGTCCAGCACCAGGTGTGCCCCACAGCCACTCCAAGCCTTATGTGAGGTCCAAGGGAAGGAAGTTTGAGAGGGCAAGAGGAAAGAGAAACAGCAGGGGATACAGGGTTTGATTCCATCATATTTTCCAGGCTAATTCAACCGTTGTGTGTTTTTCTGAACTCAGTATCGAAATTTTGCTAGATTTTAGTTACTTCAGTTGACTGTTTTGTCATAATATTGTTGATTAGGAGTTTTGATTCAATGGCATTCAGCCAGACTTTATTGAGTTCCTTTGGGGCCGACATTGTGTGATGTCCATTTGATTTGAGTTTCATTGAAATATGAGCAAGTTTTACCTTGATTTTCATTAAAATCATATTAACATCTCTAATAAAGTACCATTCTTCTTGAATCTATTTCATCTAACCAAATAATATTGGTTGGATTCTATTTCTAATATCTATAACTTCAATTTCATTATACGTAATTTCTATATATAACTACGAATAACTATAATTTAAGATGTGACATTTTGACTAAAATATTTTAAGGGTATGTTTTGATCGAATCCATTCGTAGAAATGGACTCACTTCTCTATTCACATAGATATATATTGTTTCATGGTTTTTTTTGGTTTTTTTAATATATATATTATTTTAGTTATTCAATGGTTGAACTAGTTCATAGGTCAATCTAAATTGTTTGATCCTTTTATGTTTGATGCTGAAATAGACATGTCTAAATACAAATTAAACCAATGATCCAAGAGAATGATAATGGAAAAAAGGGAGAACATGTTGGTCTCCAAGGAAGAACAACTCCTAATCTCAACCATCCATGAAAAACAACAAACACCCAACATATTTTGTTCGACCTTTTATTCCATTCAACACGATAAGGTTTCGTACAGTACACGCATTCTAAACGACCACCTACCAGACATCCATCTAAATCTCCATCAGACATTCAAATTACTTGTAAGAGTAAAGATCAAGTACTTGTAAGAGTAAAGATCAAGTACTTGTAAGAGTAAAGATCAAGTACTTGTAAGAGTAAAGATCAGACGAGATGA ATGGGTATTGATCTTGTAGCGGGAGGTAAGAGCAAGAAGACCAAGAGGACCGCGCCCAAATCTGATGATATCTACCTCAACTTACTCGTCAAGCTCTACCGCTTCCTTGTTCGTCGTACTGGAAGCAATTTCAATGCTGTGATTCTCAAGCGATTGTTCATGAGCAGGGTCAACAAGCCTCCACTTTCTCTCTCTAGGCTTATCCAGTTCATGAAAGGAAAGGAAAGCAAAATTGCCGTTGTTGTTGGGACTATTACTGATGATATTCGCGTCTATGAAGTTCCAGCATTGAAAGTTGCTGCTCTGAGATTTACAGAGACAGCAAGGGCAAGGATTGAGAAGGCTGGTGGGGAGTGTTTGACATTTGATCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTTCTCCTTAGAGGTTGTAAGAACTCCAGAGAGGCCGTGAAGCATTTTGGTCCAGCACCAGGTGTGCCCCACAGCCACTCCAAGCCTTATGTGAGGTCCAAGGGAAGGAAGTTTGAGAGGGCAAGAGGAAAGAGAAACAGCAGGGGATACAGGTACACGCATTCTAAACGACCACCTACCAGACATCCATCTAAATCTCCATCAGACATTCAAATTACTTGTAAGAGTAAAGATCAAACGAGATGA ATGGGTATTGATCTTGTAGCGGGAGGTAAGAGCAAGAAGACCAAGAGGACCGCGCCCAAATCTGATGATATCTACCTCAACTTACTCGTCAAGCTCTACCGCTTCCTTGTTCGTCGTACTGGAAGCAATTTCAATGCTGTGATTCTCAAGCGATTGTTCATGAGCAGGGTCAACAAGCCTCCACTTTCTCTCTCTAGGCTTATCCAGTTCATGAAAGGAAAGGAAAGCAAAATTGCCGTTGTTGTTGGGACTATTACTGATGATATTCGCGTCTATGAAGTTCCAGCATTGAAAGTTGCTGCTCTGAGATTTACAGAGACAGCAAGGGCAAGGATTGAGAAGGCTGGTGGGGAGTGTTTGACATTTGATCAGCTTGCTTTGAGGGCTCCTCTGGGTCAGAACACGGTTCTCCTTAGAGGTTGTAAGAACTCCAGAGAGGCCGTGAAGCATTTTGGTCCAGCACCAGGTGTGCCCCACAGCCACTCCAAGCCTTATGTGAGGTCCAAGGGAAGGAAGTTTGAGAGGGCAAGAGGAAAGAGAAACAGCAGGGGATACAGGTACACGCATTCTAAACGACCACCTACCAGACATCCATCTAAATCTCCATCAGACATTCAAATTACTTGTAAGAGTAAAGATCAAACGAGATGA MGIDLVAGGKSKKTKRTAPKSDDIYLNLLVKLYRFLVRRTGSNFNAVILKRLFMSRVNKPPLSLSRLIQFMKGKESKIAVVVGTITDDIRVYEVPALKVAALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGCKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFERARGKRNSRGYRYTHSKRPPTRHPSKSPSDIQITCKSKDQTR Homology
BLAST of Csor.00g310820 vs. ExPASy Swiss-Prot
Match: P42791 (60S ribosomal protein L18-2 OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2) HSP 1 Score: 320.5 bits (820), Expect = 1.5e-86 Identity = 160/186 (86.02%), Postives = 174/186 (93.55%), Query Frame = 0
BLAST of Csor.00g310820 vs. ExPASy Swiss-Prot
Match: Q940B0 (60S ribosomal protein L18-3 OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 4.3e-86 Identity = 159/186 (85.48%), Postives = 176/186 (94.62%), Query Frame = 0
BLAST of Csor.00g310820 vs. ExPASy Swiss-Prot
Match: O65729 (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum OX=3827 GN=RPL18 PE=2 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 4.6e-80 Identity = 151/183 (82.51%), Postives = 170/183 (92.90%), Query Frame = 0
BLAST of Csor.00g310820 vs. ExPASy Swiss-Prot
Match: O22254 (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana OX=3702 GN=RPL18A PE=3 SV=3) HSP 1 Score: 281.6 bits (719), Expect = 7.7e-75 Identity = 142/187 (75.94%), Postives = 163/187 (87.17%), Query Frame = 0
BLAST of Csor.00g310820 vs. ExPASy Swiss-Prot
Match: Q4GXG7 (60S ribosomal protein L18 OS=Timarcha balearica OX=79517 GN=RpL18 PE=2 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 4.7e-64 Identity = 123/188 (65.43%), Postives = 154/188 (81.91%), Query Frame = 0
BLAST of Csor.00g310820 vs. NCBI nr
Match: KAG6588563.1 (60S ribosomal protein L18-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 423 bits (1087), Expect = 4.45e-149 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
BLAST of Csor.00g310820 vs. NCBI nr
Match: XP_022931687.1 (60S ribosomal protein L18-2-like [Cucurbita moschata]) HSP 1 Score: 355 bits (911), Expect = 1.07e-122 Identity = 184/186 (98.92%), Postives = 184/186 (98.92%), Query Frame = 0
BLAST of Csor.00g310820 vs. NCBI nr
Match: XP_023531430.1 (60S ribosomal protein L18-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 355 bits (911), Expect = 2.77e-122 Identity = 184/186 (98.92%), Postives = 184/186 (98.92%), Query Frame = 0
BLAST of Csor.00g310820 vs. NCBI nr
Match: XP_022969995.1 (60S ribosomal protein L18-2 [Cucurbita maxima]) HSP 1 Score: 353 bits (905), Expect = 2.28e-121 Identity = 183/186 (98.39%), Postives = 183/186 (98.39%), Query Frame = 0
BLAST of Csor.00g310820 vs. NCBI nr
Match: XP_008450608.1 (PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo] >KAA0050917.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa] >TYK10265.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa]) HSP 1 Score: 351 bits (901), Expect = 3.57e-121 Identity = 182/186 (97.85%), Postives = 183/186 (98.39%), Query Frame = 0
BLAST of Csor.00g310820 vs. ExPASy TrEMBL
Match: A0A6J1EUD5 (60S ribosomal protein L18-2-like OS=Cucurbita moschata OX=3662 GN=LOC111437842 PE=3 SV=1) HSP 1 Score: 355 bits (911), Expect = 5.17e-123 Identity = 184/186 (98.92%), Postives = 184/186 (98.92%), Query Frame = 0
BLAST of Csor.00g310820 vs. ExPASy TrEMBL
Match: A0A6J1I1I5 (60S ribosomal protein L18-2 OS=Cucurbita maxima OX=3661 GN=LOC111469018 PE=3 SV=1) HSP 1 Score: 353 bits (905), Expect = 1.10e-121 Identity = 183/186 (98.39%), Postives = 183/186 (98.39%), Query Frame = 0
BLAST of Csor.00g310820 vs. ExPASy TrEMBL
Match: A0A5A7U942 (60S ribosomal protein L18-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004150 PE=3 SV=1) HSP 1 Score: 351 bits (901), Expect = 1.73e-121 Identity = 182/186 (97.85%), Postives = 183/186 (98.39%), Query Frame = 0
BLAST of Csor.00g310820 vs. ExPASy TrEMBL
Match: A0A1S3BPL9 (60S ribosomal protein L18-2 OS=Cucumis melo OX=3656 GN=LOC103492145 PE=3 SV=1) HSP 1 Score: 351 bits (901), Expect = 1.73e-121 Identity = 182/186 (97.85%), Postives = 183/186 (98.39%), Query Frame = 0
BLAST of Csor.00g310820 vs. ExPASy TrEMBL
Match: A0A6J1HVV8 (60S ribosomal protein L18-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467927 PE=3 SV=1) HSP 1 Score: 350 bits (899), Expect = 3.49e-121 Identity = 182/186 (97.85%), Postives = 182/186 (97.85%), Query Frame = 0
BLAST of Csor.00g310820 vs. TAIR 10
Match: AT3G05590.1 (ribosomal protein L18 ) HSP 1 Score: 320.5 bits (820), Expect = 1.1e-87 Identity = 160/186 (86.02%), Postives = 174/186 (93.55%), Query Frame = 0
BLAST of Csor.00g310820 vs. TAIR 10
Match: AT5G27850.1 (Ribosomal protein L18e/L15 superfamily protein ) HSP 1 Score: 318.9 bits (816), Expect = 3.1e-87 Identity = 159/186 (85.48%), Postives = 176/186 (94.62%), Query Frame = 0
BLAST of Csor.00g310820 vs. TAIR 10
Match: AT2G47570.1 (Ribosomal protein L18e/L15 superfamily protein ) HSP 1 Score: 197.6 bits (501), Expect = 1.0e-50 Identity = 98/134 (73.13%), Postives = 116/134 (86.57%), Query Frame = 0
BLAST of Csor.00g310820 vs. TAIR 10
Match: AT2G47570.2 (Ribosomal protein L18e/L15 superfamily protein ) HSP 1 Score: 197.6 bits (501), Expect = 1.0e-50 Identity = 98/134 (73.13%), Postives = 116/134 (86.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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