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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCCCGAACACCCAATCACGGCCCAAGCGAAGACGTCGGCCCAGTTGAAACACGACCCGCCGCCCCAGCGAACCGACCCAAAGACCCGCGCTTCGACCCGACTACGGCTGCCTTCTTCAGCGCCACACGTGGTCAGCATGTGATTAGCTCTAAGCTGCGGCTCCTCTCGACTCGGCCGACGATTCCCAACTTGGCTTCAATGCGTCCTTGGCTCGGCTTCGTCGTTTCGCTCCGCTCGGCTTGGCAGCTCGATTTCTCGGCTTAG mRNA sequence ATGGCCCGAACACCCAATCACGGCCCAAGCGAAGACGTCGGCCCAGTTGAAACACGACCCGCCGCCCCAGCGAACCGACCCAAAGACCCGCGCTTCGACCCGACTACGGCTGCCTTCTTCAGCGCCACACGTGGTCAGCATGTGATTAGCTCTAAGCTGCGGCTCCTCTCGACTCGGCCGACGATTCCCAACTTGGCTTCAATGCGTCCTTGGCTCGGCTTCGTCGTTTCGCTCCGCTCGGCTTGGCAGCTCGATTTCTCGGCTTAG Coding sequence (CDS) ATGGCCCGAACACCCAATCACGGCCCAAGCGAAGACGTCGGCCCAGTTGAAACACGACCCGCCGCCCCAGCGAACCGACCCAAAGACCCGCGCTTCGACCCGACTACGGCTGCCTTCTTCAGCGCCACACGTGGTCAGCATGTGATTAGCTCTAAGCTGCGGCTCCTCTCGACTCGGCCGACGATTCCCAACTTGGCTTCAATGCGTCCTTGGCTCGGCTTCGTCGTTTCGCTCCGCTCGGCTTGGCAGCTCGATTTCTCGGCTTAG Protein sequence MARTPNHGPSEDVGPVETRPAAPANRPKDPRFDPTTAAFFSATRGQHVISSKLRLLSTRPTIPNLASMRPWLGFVVSLRSAWQLDFSA
Homology
BLAST of Csor.00g310690 vs. NCBI nr
Match: KAG6588576.1 (hypothetical protein SDJN03_17141, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 181 bits (460), Expect = 1.27e-57 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 Query: 1 MARTPNHGPSEDVGPVETRPAAPANRPKDPRFDPTTAAFFSATRGQHVISSKLRLLSTRP 60 MARTPNHGPSEDVGPVETRPAAPANRPKDPRFDPTTAAFFSATRGQHVISSKLRLLSTRP Sbjct: 1 MARTPNHGPSEDVGPVETRPAAPANRPKDPRFDPTTAAFFSATRGQHVISSKLRLLSTRP 60
Query: 61 TIPNLASMRPWLGFVVSLRSAWQLDFSA 88 TIPNLASMRPWLGFVVSLRSAWQLDFSA Sbjct: 61 TIPNLASMRPWLGFVVSLRSAWQLDFSA 88
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6588576.1 | 1.27e-57 | 100.00 | hypothetical protein SDJN03_17141, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..35 |
Relationships
The following mRNA feature(s) are a part of this gene:
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