
Csor.00g262310 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTTGCTCGTCTCACTGAGGCCTTGGATTCCGAATCTTACGAAAACATCGCTGATATCTGTGATGAACTCATGCTTCAGGCCAGATAATTTTCTTCTTTTTTTCACTTTTAAGTTTCACTTTGTTTGTTCCTCGATTCTCCGAAACCCTGGCTTGATTTATCCACTGGGATTTGTTTAAATTAACAGGCTGCAGCTGAGGGCATTTCTTATCAGGATGAATGGCCTTACACAATCCATTTTCTTGGCTACTTTTACGTTGATGATATGTAAGATCATTTTCCATGTTTCCTATTCATTTCACTTCAAATCGTGAAGAAATTTTTAGAATACTTCTTGGTTGAATCTTTTGTGGATCTTGTATTTTGAAGCGCCATTTTAATTCTTGGGTTAGTTGATTTTACTCTCGTGAAGGAATTTTAAACTACATTTGAGAAGTTTTGTTTCTTTGGAACGAAATAAAGATTAGGGCACCAAACTAGAAAATTATGTAAGATAATGTTATCATTGATTGTTGGCTCATGAAAATTCTCAACCAATGCAGGAGTTACCCCAGAATTTCCTTGGGAGTGTTCTTTAGGAAATATGAATTATTTCTTGGCCCAGAATTTTTATTCTATTTGAAAAGAACAATATGGTTAAAGTTGTCCTGTCGATGTTCCTAAGAAACATACTTTAATTTCTTTATTTATCTTCATCTGTCAACCTTTTTAAACTTGCTGCCAGGGCTCTATAATGTTACTTCGGAGTTATTTGTTTCTAAATGCACTGGCTTGCATTTCGTGAGTTAAGTCCATATGTAAACTATTTATAGATTTTATCTTAGATTCACCGTTCAATTTTTGTTTCAGATATCTTTTTTTCTTTCATTAAATTTTGTGGTTGAATCTTTTCGTAACTAGGTTAATATCATAACACTTGGTTGAAGTTGAGTTTCCTTATGTGAATTTGTGGATTATTGGCTGACTGTTAACTGTTAAGTGGTTTCTTGCAGCAATAGTGCTCGATTTCTCTGGAAAGCAATACCTTCCACTATAAAAGAGAACCGACCAGAACTGGTTGCAGTTTGGAAAATTGGCCAAAAGCTATGGATTCGGGACCATGGGGGTGTTTATGAGGCTATTGATGGATTTGATTGGTCTCAAGAGGTTCGAGGCCTATTAGCAGCATTTTCAGGCAAGTTGCTATAATTTTTTTCCTTTTCAAAGGCAATGAAATATTTCATTGGCGATATGAAAGTAGGAAGTAAATTCACATTAATTCCATTCCGAAATCCAACAAACTCCAAGTGCCCCCCCCCCGAAAGAGATATAAAATGCTACTGCCCATTCAAATGATATGATAACACAGACATAACTTCTTGACAGGATTGAGAAGAAGCCATTTCAGAAAATGATGGGGACTATTAAAGAAACCCAAAGGATTTGACAACCTTTCAAAGAATCTTTAGGTGAAAAAAACCATTCCATAAATAGCCTCCATCATCTGCAAAAGAACCCAGAAACTGTGAAAATAAAATTACTTTCCCATTGAATATTTGGGAAAGTTTTCATGAAATTACATATTAGGTTTGAGTATAGTTTCAATTTGGTCCTCATGGTTTTAGAAGTTTCAATGTAGTTTCTGTAGTTTGGGCTTAGTTTCAATTTGGTCTCTATAGTTTTAAAAGCTTTAGTTTGGCCTTCGTGTTTTGGACTTAGTTTCAATTTTTCTATAGTTTTAAAAGTTTCCATTTGGTCCTTCTGACTTGGGCTTGGTTTCAATTTGGCCTCTATAGGTTAAATAAACAACCTTCACATGTCGTCCCAGAATTTGTGTTTTGCCCACAAAAAAATTGACTTATTTCCTCACATTCTTACTTAGCCTTAAACTCTAATACAATCAACCTACACAACTAAAATAGAAAATATCATCATATTGCCATGTAAAAAAAATTGAGAGTAATGATAAAGATAATTTGTGAGGTTTGACTGAGTCAGTAGGGACCAAATTGAAACTTTTAAAACGACAGGGACCAAATTTAAACTAAGTTCAAACCATTTGGATTAAATTGGAATATCCCTATAGGGTGGGAGAGTAAGGTTGCCTGTTGTCTAGCTCCTGATACTTTATCTAAAAACGAGGAAGCATGATTGAACCTCGGAATGACATAAGGTGAATGTGAATCTAATTATAAAATGTAAGAAGTTGCAACGTGAGCAGTTTGTTAGACACAAAAGCAACAAGTTTGTCCTCAACTTGTTTGAATTAAAAATTAAAAAATTATAATTGATTTGCCATATTTCGATGGGATGGTTACAACCGTATACTACTTATTAAGCCCTTGTTGTCACTGTCTAAAGGCAAGGCTCCTACACTCCACAACGTCATGAACTTCATTGGTACCGATCCAAACCATAAGGGAGAAACCGTCTGTTTTAACAATGTCAAATTCTTCAGTTCCTATCCCAAACCTTAAGAGTTTTTGGGATTGAAAACTCTTGTTTTAACTTCAATGCTAGTAACTTGTTGGATGTGTCTGTGTTAAACTTAAAATGCCAAATCTCATGGAAGAAAAAAAGAGGATAAAAGAAGAAAAAAGGGGGAAAAAGGAAATATAACGAAAAAAAAACCTGTATCAGGCTGTTCAGACGAGGGTGGTTAATTTGAAGCTACCAGACATGTTTTCTTGTTAGTACTGTTGTCTGAAACAGGTAAAAATGAATTCCCCAGCCCCAGCCTCCAACACAAACTTGCTTTTTTGGGGGGTCTTTGTTTGGTTGGGTCCTTTTTGCTCTTAGAGAGCTTGTTTTGCTCTTTGGTTGCTTTGGACGTGTTTTTAGTTTGGCCGAGTGTTTTGTTCTTTTCACTCCCTATGGGAGTTTGTATCCTTGAACTTTTATAACTTTTGATGTTTGAACAAAGAGTTATTTCTTGTTAAGAAAAAGGAAAAATTAACATCAAGAAACTTTAAAAAAACATGATATGAATATTAAACATCAATATAAGCTTTGTTCTCATGCTGCAGATCTTTACAGAAAAAGAATGTTTCAGTTGCTGGTGTCTGCTTATTCTACAATAAGTATCCATGATACAGCTCACTTCTTGGGAATGAATGAGGAAGAAGCCAAAAATTGTAAGCCTCTTTTGCTAGTTACTTCTTGTCTCTTATTAGAATTTCAGCATCTATGAGTAATGAGTAAGAATTTTGAGGGGAGAGGTTCCCACTTGGTTAAGGATTAGGAATTGGGAGCTTGAGATTCTGTCATGAGGCTTTCTTGATGAAATTGTTGTGGTATAGAGTGATTATCTGTAGACTTGACCCTCACCCTTTTGAGTGGAAAACAATTTCTCCTCAATTTCCTTCTTTCTCTCAATTTATCAATTTCTCTATTAGGACTGCTTCAGAATTTATTTTTGGTTGGATCATTGTGTGGGTGATGAGTCTTTCTGTGTTTCATTTTCATACCATCTTTTGAACAAGAGGTTGCATCTGGTGGCTTCAGTGTTGCCTTCCTCAAACGCTACTTCTTCAATTTCCTTATGTCTTCGTCGTCCTGTCTGATAGAGGGCCGCTTGATGTGGTGGAACTTCTTTCTCTTTTTCGAGACGAGAAAAAATCTGACGGAGAAAGGACGTTAGGATTTATACCCTTGATCTTGTGAAAAAACACCTCCTCTGATTAAAGAGGGCAGATAAACTATAATTACCAAAAGGAGGATACATTTTGCACCAAGTTCTAGCTAAAAGAGACGCGAATTCCAAAAGAAAAAACAAACATGACAAAGCCAAAGGATCTTTTGTCCTTTTTTGAATGGATGACCCAAAAATAATAGAGAGATGAGGGAAAGGATATCACTTGGTCTGAGAATTCCCATTCAAAGTTGCCTTGTAAATCACTCAAAATCTTTGAAACGAAGGCGCGGCTACTAAAAATCCATGGAAAGGGCATAGGACAGAAGCTGGGAATCTTCTTTGGCAGCTCCAAAGGTTGTTAATGTATCGACCATACATGATGATATAGAGCTGAATTGTGCTTGATTCACTGGGGGAGAGGACCTTTGGATGTTATTAAATGCATTAAAATGCCTCTGGAACCAGAGTCGCATACCTATGAAGCTGAGTCTAAATTAGGATGTTACGATCGTGAACAGTAGAGAAACACCACTACTGCCCCACCACAAAGGATGAATGACTCAAAACATGGCCCAAGGTGTTAACCCCCAAGCAAGAGTTGCCAACCAAAGAAGAGTTTGATCCTCTTTTGAATTTTGACCTTCCATGAAAGAGGGTAGAAAGACCCAAGAGTAGAAGGGATCACAAAAAAGACAAGGCCTACAAGAAAACCCTCTACCTCTAGAAGAATGTGGAAATTTTAGACAGTAATATCCATCCGGGCCTTCTCATCAATGGATTCCCGACGTATACTAAAGAGTGCGGTTCGTTCAATAGATTTTTCAAAACTTTATGGACATGCATAAGAGAAATACTATCCCCACTCGGACCAAGACATAACTTTTACTTGTTCAAATAACAATGAAGGTGAAACAGAATCATGAACAACGAATCTCTTTATGATAAACAAATTCATTTTGCAAGTTTGTTATTACGGGTAGTTCCTATAAAGGTTTCGGGCCTTTCTTGCTTAAATTACCTCTATCTTGTAGGTCTGTTCTTTTTTGCAAAAGGATTGCCTTCTGTATTTGGAGATAATAATTGCTATATTATTTTGATGACAATAATGTTTCTTGAAGTGGGCTGGTTTTTAGATGGCTATATTATTTAGACCTTAAGTTTACAAACAAGACGCCCTGTTTGTACTTGCAGATGTAACACCGCAAGGATGGATTGTTGATGTTGCTTCTCAAATGTTCACTGTGAAGAAACAACAAATCGCGACAGAGCAGAAGTTAGATTCCAGCAAATTGCAGCGCTTGACCGAATACGTTTTCCATCTCGAACATTGA ATGGATTTTGCTCGTCTCACTGAGGCCTTGGATTCCGAATCTTACGAAAACATCGCTGATATCTGTGATGAACTCATGCTTCAGGCTGCAGCTGAGGGCATTTCTTATCAGGATGAATGGCCTTACACAATCCATTTTCTTGGCTACTTTTACGTTGATGATATCAATAGTGCTCGATTTCTCTGGAAAGCAATACCTTCCACTATAAAAGAGAACCGACCAGAACTGGTTGCAGTTTGGAAAATTGGCCAAAAGCTATGGATTCGGGACCATGGGGGTGTTTATGAGGCTATTGATGGATTTGATTGGTCTCAAGAGGTTCGAGGCCTATTAGCAGCATTTTCAGATCTTTACAGAAAAAGAATGTTTCAGTTGCTGGTGTCTGCTTATTCTACAATAAGTATCCATGATACAGCTCACTTCTTGGGAATGAATGAGGAAGAAGCCAAAAATTATGTAACACCGCAAGGATGGATTGTTGATGTTGCTTCTCAAATGTTCACTGTGAAGAAACAACAAATCGCGACAGAGCAGAAGTTAGATTCCAGCAAATTGCAGCGCTTGACCGAATACGTTTTCCATCTCGAACATTGA ATGGATTTTGCTCGTCTCACTGAGGCCTTGGATTCCGAATCTTACGAAAACATCGCTGATATCTGTGATGAACTCATGCTTCAGGCTGCAGCTGAGGGCATTTCTTATCAGGATGAATGGCCTTACACAATCCATTTTCTTGGCTACTTTTACGTTGATGATATCAATAGTGCTCGATTTCTCTGGAAAGCAATACCTTCCACTATAAAAGAGAACCGACCAGAACTGGTTGCAGTTTGGAAAATTGGCCAAAAGCTATGGATTCGGGACCATGGGGGTGTTTATGAGGCTATTGATGGATTTGATTGGTCTCAAGAGGTTCGAGGCCTATTAGCAGCATTTTCAGATCTTTACAGAAAAAGAATGTTTCAGTTGCTGGTGTCTGCTTATTCTACAATAAGTATCCATGATACAGCTCACTTCTTGGGAATGAATGAGGAAGAAGCCAAAAATTATGTAACACCGCAAGGATGGATTGTTGATGTTGCTTCTCAAATGTTCACTGTGAAGAAACAACAAATCGCGACAGAGCAGAAGTTAGATTCCAGCAAATTGCAGCGCTTGACCGAATACGTTTTCCATCTCGAACATTGA MDFARLTEALDSESYENIADICDELMLQAAAEGISYQDEWPYTIHFLGYFYVDDINSARFLWKAIPSTIKENRPELVAVWKIGQKLWIRDHGGVYEAIDGFDWSQEVRGLLAAFSDLYRKRMFQLLVSAYSTISIHDTAHFLGMNEEEAKNYVTPQGWIVDVASQMFTVKKQQIATEQKLDSSKLQRLTEYVFHLEH Homology
BLAST of Csor.00g262310 vs. ExPASy Swiss-Prot
Match: P43255 (COP9 signalosome complex subunit 8 OS=Arabidopsis thaliana OX=3702 GN=CSN8 PE=1 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 2.6e-77 Identity = 135/197 (68.53%), Postives = 159/197 (80.71%), Query Frame = 0
BLAST of Csor.00g262310 vs. ExPASy Swiss-Prot
Match: Q6GQA6 (COP9 signalosome complex subunit 8 OS=Xenopus laevis OX=8355 GN=csn8 PE=2 SV=2) HSP 1 Score: 128.6 bits (322), Expect = 7.6e-29 Identity = 72/198 (36.36%), Postives = 110/198 (55.56%), Query Frame = 0
BLAST of Csor.00g262310 vs. ExPASy Swiss-Prot
Match: Q6P637 (COP9 signalosome complex subunit 8 OS=Xenopus tropicalis OX=8364 GN=csn8 PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.9e-28 Identity = 68/185 (36.76%), Postives = 107/185 (57.84%), Query Frame = 0
BLAST of Csor.00g262310 vs. ExPASy Swiss-Prot
Match: Q7ZUZ0 (COP9 signalosome complex subunit 8 OS=Danio rerio OX=7955 GN=cops8 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 8.6e-25 Identity = 56/150 (37.33%), Postives = 87/150 (58.00%), Query Frame = 0
BLAST of Csor.00g262310 vs. ExPASy Swiss-Prot
Match: Q8VBV7 (COP9 signalosome complex subunit 8 OS=Mus musculus OX=10090 GN=Cops8 PE=1 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.6e-23 Identity = 68/204 (33.33%), Postives = 101/204 (49.51%), Query Frame = 0
BLAST of Csor.00g262310 vs. NCBI nr
Match: KAG6588823.1 (COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 400 bits (1028), Expect = 1.03e-140 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Csor.00g262310 vs. NCBI nr
Match: XP_022927899.1 (COP9 signalosome complex subunit 8-like [Cucurbita moschata]) HSP 1 Score: 398 bits (1023), Expect = 5.94e-140 Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Csor.00g262310 vs. NCBI nr
Match: XP_023531250.1 (COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 389 bits (1000), Expect = 1.91e-136 Identity = 191/197 (96.95%), Postives = 193/197 (97.97%), Query Frame = 0
BLAST of Csor.00g262310 vs. NCBI nr
Match: XP_022989724.1 (COP9 signalosome complex subunit 8-like [Cucurbita maxima]) HSP 1 Score: 384 bits (986), Expect = 2.61e-134 Identity = 189/197 (95.94%), Postives = 192/197 (97.46%), Query Frame = 0
BLAST of Csor.00g262310 vs. NCBI nr
Match: XP_038888574.1 (COP9 signalosome complex subunit 8 [Benincasa hispida]) HSP 1 Score: 358 bits (920), Expect = 3.01e-124 Identity = 177/197 (89.85%), Postives = 185/197 (93.91%), Query Frame = 0
BLAST of Csor.00g262310 vs. ExPASy TrEMBL
Match: A0A6J1EJA8 (COP9 signalosome complex subunit 8-like OS=Cucurbita moschata OX=3662 GN=LOC111434662 PE=4 SV=1) HSP 1 Score: 398 bits (1023), Expect = 2.88e-140 Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Csor.00g262310 vs. ExPASy TrEMBL
Match: A0A6J1JQ49 (COP9 signalosome complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111486724 PE=4 SV=1) HSP 1 Score: 384 bits (986), Expect = 1.26e-134 Identity = 189/197 (95.94%), Postives = 192/197 (97.46%), Query Frame = 0
BLAST of Csor.00g262310 vs. ExPASy TrEMBL
Match: A0A1S3BMN0 (COP9 signalosome complex subunit 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491316 PE=4 SV=1) HSP 1 Score: 348 bits (894), Expect = 1.34e-120 Identity = 170/197 (86.29%), Postives = 182/197 (92.39%), Query Frame = 0
BLAST of Csor.00g262310 vs. ExPASy TrEMBL
Match: A0A6J1DU53 (COP9 signalosome complex subunit 8 OS=Momordica charantia OX=3673 GN=LOC111024447 PE=4 SV=1) HSP 1 Score: 348 bits (892), Expect = 2.70e-120 Identity = 167/197 (84.77%), Postives = 184/197 (93.40%), Query Frame = 0
BLAST of Csor.00g262310 vs. ExPASy TrEMBL
Match: A0A6J1HVB2 (COP9 signalosome complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111467007 PE=4 SV=1) HSP 1 Score: 347 bits (890), Expect = 5.45e-120 Identity = 168/197 (85.28%), Postives = 180/197 (91.37%), Query Frame = 0
BLAST of Csor.00g262310 vs. TAIR 10
Match: AT4G14110.1 (COP9 signalosome, subunit CSN8 ) HSP 1 Score: 289.7 bits (740), Expect = 1.8e-78 Identity = 135/197 (68.53%), Postives = 159/197 (80.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|