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Csor.00g262140 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCCTTCAAGTCGTTCCTCATCGCTGTTTTGGTTGTCACTTCATCTTCTTCGTGTATTCATGTGACTCTAGCAGGTCGCCATCTCCAACAATTTCCACTAATTCCACTTCCACCCCTCACCGTGCCCGGTCTTCCACCTATCACCATCCCTTCATCGGTACCCGGTCTTCCACCCATCACCATACCCGGTACTCCACCTTTCACCCTCCCTTCACTCCCAACTATTCCACCAATTTCTCTCCCTTCACTTCCTGCTATTCCACCCATCACTCTCCCTACACTCTCAGGTACTCCATCGATTACTGTCCCTTAA ATGGCATCCTTCAAGTCGTTCCTCATCGCTGTTTTGGTTGTCACTTCATCTTCTTCGTGTATTCATGTGACTCTAGCAGGTCGCCATCTCCAACAATTTCCACTAATTCCACTTCCACCCCTCACCGTGCCCGGTCTTCCACCTATCACCATCCCTTCATCGGTACCCGGTCTTCCACCCATCACCATACCCGGTACTCCACCTTTCACCCTCCCTTCACTCCCAACTATTCCACCAATTTCTCTCCCTTCACTTCCTGCTATTCCACCCATCACTCTCCCTACACTCTCAGGTACTCCATCGATTACTGTCCCTTAA ATGGCATCCTTCAAGTCGTTCCTCATCGCTGTTTTGGTTGTCACTTCATCTTCTTCGTGTATTCATGTGACTCTAGCAGGTCGCCATCTCCAACAATTTCCACTAATTCCACTTCCACCCCTCACCGTGCCCGGTCTTCCACCTATCACCATCCCTTCATCGGTACCCGGTCTTCCACCCATCACCATACCCGGTACTCCACCTTTCACCCTCCCTTCACTCCCAACTATTCCACCAATTTCTCTCCCTTCACTTCCTGCTATTCCACCCATCACTCTCCCTACACTCTCAGGTACTCCATCGATTACTGTCCCTTAA MASFKSFLIAVLVVTSSSSCIHVTLAGRHLQQFPLIPLPPLTVPGLPPITIPSSVPGLPPITIPGTPPFTLPSLPTIPPISLPSLPAIPPITLPTLSGTPSITVP Homology
BLAST of Csor.00g262140 vs. NCBI nr
Match: KAG6588806.1 (hypothetical protein SDJN03_17371, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193 bits (490), Expect = 1.15e-61 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Csor.00g262140 vs. NCBI nr
Match: XP_023530005.1 (cell wall adhesin EAP1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 105 bits (262), Expect = 4.52e-26 Identity = 65/117 (55.56%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of Csor.00g262140 vs. NCBI nr
Match: XP_023530185.1 (RNA-binding protein 12-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 81.3 bits (199), Expect = 2.91e-17 Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 0
BLAST of Csor.00g262140 vs. NCBI nr
Match: KAG6588805.1 (hypothetical protein SDJN03_17370, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 68.6 bits (166), Expect = 2.02e-12 Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 0
BLAST of Csor.00g262140 vs. NCBI nr
Match: XP_031258976.1 (protein PELPK1-like [Pistacia vera]) HSP 1 Score: 69.7 bits (169), Expect = 2.13e-12 Identity = 50/118 (42.37%), Postives = 68/118 (57.63%), Query Frame = 0
BLAST of Csor.00g262140 vs. ExPASy TrEMBL
Match: A0A067EZN0 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g033039mg PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.53e-11 Identity = 45/108 (41.67%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of Csor.00g262140 vs. ExPASy TrEMBL
Match: A0A6A5Y1R6 (Uncharacterized protein OS=Aaosphaeria arxii CBS 175.79 OX=1450172 GN=BU24DRAFT_488840 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.81e-10 Identity = 38/72 (52.78%), Postives = 56/72 (77.78%), Query Frame = 0
BLAST of Csor.00g262140 vs. ExPASy TrEMBL
Match: A0A2C9V4X0 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G100000 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.43e-10 Identity = 52/103 (50.49%), Postives = 62/103 (60.19%), Query Frame = 0
BLAST of Csor.00g262140 vs. ExPASy TrEMBL
Match: A0A5D3CBA5 (Formin-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2404G00010 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.83e-10 Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 0
BLAST of Csor.00g262140 vs. ExPASy TrEMBL
Match: A0A1S4E3J0 (formin-2-like OS=Cucumis melo OX=3656 GN=LOC107991890 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.83e-10 Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 0
BLAST of Csor.00g262140 vs. TAIR 10
Match: AT2G10940.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 2.0e-07 Identity = 45/107 (42.06%), Postives = 69/107 (64.49%), Query Frame = 0
BLAST of Csor.00g262140 vs. TAIR 10
Match: AT2G10940.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 2.0e-07 Identity = 45/107 (42.06%), Postives = 69/107 (64.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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