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Csor.00g260140 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAACTGTGAAGGAGCTAGAGGAGTCTGTCCTTGCTGCGTGGTGTGGCTACTGGGATGATGTGAGAGATTATTAGCGCAAAATTCAGGAGATGAATGAGGAAAAGAAAACTCTAGACAGAGAGTTGGCTCATGCAAAGGTGTCAGCCTACAAAGTGGCTGTAGTAGAAGCAAATTAAAAAATCCAGAAGTTACTCATTGAGAATCTTTTCCTTCAGCACCGAACAGGTCCCCATTCAGAAATTTCCAGTATTGAAGATGAACCAAAGAAAGAAATTGATTCCAACAATGGCTTCTCCTTGTCGGATTGCGAAGAAAGCATTGTATCGGCTCCTGCCATTGATCCAATTCCGCCACCACAGTTCGCTACAACTCTGCCACCACAAGCACACTCGCAGGCCATAGTAGAATTGGTTCTAGAGAAGCCATTGCCTGAAGGCAAGCTCTTAGAAGTAGTGATGAAAGCAAGCCCTCTGCTCACACTCTGCTTGTTGCCGGACCTCTTCCTGAGTGGAGGCACCCACCCCTGCCACTTGAATCCTGAGTGGAGGACAATATCTGCTAGCGGTGGATATAGGCTGTTACATAACATATATAAGTAAGAAAACTAGAAGTCTAGATAACTTTGCAGCTCTAACAATCTAAAAAGCTTACAATCCAATTATAGGACAAGAGCTCTCCATCGGAATACCTTGTGTCAAATTTCCAGCTTGAAGAGCCAATGTTTAGGAAGAAGTAGATGATCAATCTCAAATTTTGGGGATCAAGGTTGAAATCCTTGGGAATCGAAATATACAACTTTTGAAGAATTCAATTATGGATATTGACTCACCTAATTTGCATAAAATAATTTGAACTTAAACTTGGTTCCAAATAGTTTGAATTAACTAAAAAGTAGCCATATAAGCTTAAAACTATATATAAAAAAAAAATGCATCTAGAAGAGTCAAAAGTGGTACGAAAGGTATGAATGTGATCAAATCCAAGCCAGATTAGTTGAGAGATCGAGCTGGAGCAGTCAGAAAATGTATTATCTAACTAGCTCTGAACCGCTCAAGTGGGATGAATCAGAGTAATGGTTGTGACTTAGTAAGCCGAGGGATCTCCCTTTTATATTGAATTCCAACTCTCCACTTTCTCAATCTAATCGATGTGGGACAAATTTTTTGTCATCTATTTTTTTTTTTGTTGTTACGTCATACACATCTAAAATAAATTTTCATCCTCGAAAGTACCTTAAACTTAGAATAACTTGGTTCTCATCGTTGAGAGAGATTTGTAATCCATAACGTTGGGACTATCAAATATTTTTTAAGCATGAATACGTGCAATACGTTATGCACCGTGGAGATGAACGGTGGAAGGGCTAACCTATAACACCCTCAAAATAAAGGAAATTAGCTCCAATGAGAATAAGCTGCTCAAGTACAACCCTAAGGATCCTAGAAAAAAAAAAAAAAAAAATTAAGAGGATTGAGCAAAGACAATAGTCTTAAACTATAAATTAAACCCGTTAAAGGCCTTTCGAAAAGGATTGGAAAGGAAAAAGTAAGCTAAAAGGAAAGAAAAGATCATTTTTCCAATTTTAATGAACTTTTCAAATTTTTAATCCCTTATCTACCCGAAATTTCAATATGTTCAAGAAGGAAAAAATGATCCATGGATGAAGAACTTTTAGAAAAATTATGGATTTTTCAAGAAAAATAATAACAAAATATTTGGAAGTGGCAAATTATCAAAATACCCCTAAAATTAGAACCTCCACGGTGACCATCTGCACAAAATCCATCTAATCTCAAATCTAAGGGGTTGGATCTCCTCCAAAATTGGATACAATCCAGAACAGTCACAATCCCAGATCATCACATCCAACAACTAGGATTCAAAACCAAGGTCGGTAATGCTCTGATCGGAGCTGATATTTCAAACAGATTATCGAAAAAGTTCAATCTCTAACTCATGAAGATTCTGAAGCTCTCAATGTCGGTTTAAGCTCTCCCTAAGTCTAAAATTGAGGCAACAATATGGAACAAGAATCGAGCAAGGTCCAGCTCCCAATCGTAAGCCGTAAGCGTTTAGATTTTAGGTTTCCTACTCTTAGATTTCTTCTAAATTCGAGAGCAATTATCCATCGTTTCTTTTCAAACTTGTTCCTACAGTTCCTAAACAAGATTACCCACAAGTTCTATGAACCATTTCTCTTCAAACTTGTTTCTACGGTTTCTAAACAAGATTACTCACAAGTTCTATGAAGCAATAGAGTGCTAAAAGTGCCTAGAAACCATTCCCCCAATCCAATCCGTCATTGAAGAGATTGGAGAAAACTTGAAAATCCAATTTGAGGATACACTATAATTCGTTGAGCAAGAATGATCCCAATTAGTTTCTGCACCTCCAAGCAATGTTTCCATAGAAGACCACGGAAAGAAATAACCTCAGAAACGTGCCCAATTGAAGAAAATGAGTTTCGAGCTCAAATTGGGGGTAAGTGTCGAATTCTTATCTACGGTCTATTTTCCTTAAAATTGAGAATTCCTTCAGATTCATAGGAAGAAGTTGAGTAAGTTTGGTGAAGAAATTGAGAGCTGAAATGTCGTAGAAAAGGCTACCCAAGAGATCGAAATCTAGTGTTTCGGGTAACTTGCAGACTGAGAGCAGTTCTCAAAATGTGGGGACACACACTCAAAGTCGTTCCTCCAAACCAATTCCTTTAGCTTGTGAAAAGGATATGGAAGAAGTTCCATGATGAAATCAGGCCTTGAAAACCCATAGAATCGGCTACCAAATAAGAAATCATATATTTCAGCTCCGATGAGACAATTGATTTTTGACGAACTTTGGAGATGGATATTTTAGGCTACGATCCACAAGAAAGTATGAAATCAATCCCTATCTCTTCTTTGTAACACCATTTTTAAGTTTCATGAAGAAATGGAGATTGCCTGTTTAGGTTCATAAGAATGAGATATACAAGTCTTGTGAGGAGAACAAAGCATGA ATGCAAACTGTGAAGGAGCTAGAGGAGTCTGTCCTTGCTGCGTGGTGTGGCTACTGGGATGATCACCGAACAGGTCCCCATTCAGAAATTTCCAGTATTGAAGATGAACCAAAGAAAGAAATTGATTCCAACAATGGCTTCTCCTTGTCGGATTGCGAAGAAAGCATTGTATCGGCTCCTGCCATTGATCCAATTCCGCCACCACAGTTCGCTACAACTCTGCCACCACAAGCACACTCGCAGGCCATAGTAGAATTGGTTCTAGAGAAGCCATTGCCTGAAGGCAAGCTCTTAGAAGTTCATAAGAATGAGATATACAAGTCTTGTGAGGAGAACAAAGCATGA ATGCAAACTGTGAAGGAGCTAGAGGAGTCTGTCCTTGCTGCGTGGTGTGGCTACTGGGATGATCACCGAACAGGTCCCCATTCAGAAATTTCCAGTATTGAAGATGAACCAAAGAAAGAAATTGATTCCAACAATGGCTTCTCCTTGTCGGATTGCGAAGAAAGCATTGTATCGGCTCCTGCCATTGATCCAATTCCGCCACCACAGTTCGCTACAACTCTGCCACCACAAGCACACTCGCAGGCCATAGTAGAATTGGTTCTAGAGAAGCCATTGCCTGAAGGCAAGCTCTTAGAAGTTCATAAGAATGAGATATACAAGTCTTGTGAGGAGAACAAAGCATGA MQTVKELEESVLAAWCGYWDDHRTGPHSEISSIEDEPKKEIDSNNGFSLSDCEESIVSAPAIDPIPPPQFATTLPPQAHSQAIVELVLEKPLPEGKLLEVHKNEIYKSCEENKA Homology
BLAST of Csor.00g260140 vs. NCBI nr
Match: KAG6588606.1 (hypothetical protein SDJN03_17171, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 234 bits (597), Expect = 1.06e-77 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of Csor.00g260140 vs. NCBI nr
Match: XP_022972406.1 (microtubule-associated protein 70-4-like [Cucurbita maxima]) HSP 1 Score: 136 bits (343), Expect = 4.55e-37 Identity = 77/125 (61.60%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of Csor.00g260140 vs. NCBI nr
Match: XP_023532688.1 (uncharacterized protein LOC111794782 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 125 bits (315), Expect = 4.53e-33 Identity = 66/79 (83.54%), Postives = 70/79 (88.61%), Query Frame = 0
BLAST of Csor.00g260140 vs. NCBI nr
Match: XP_022958141.1 (uncharacterized protein LOC111459455 [Cucurbita moschata] >KAG7035985.1 hypothetical protein SDJN02_02785 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 122 bits (306), Expect = 1.01e-31 Identity = 64/79 (81.01%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Csor.00g260140 vs. NCBI nr
Match: KAG6606034.1 (hypothetical protein SDJN03_03351, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 122 bits (306), Expect = 1.01e-31 Identity = 64/79 (81.01%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Csor.00g260140 vs. ExPASy TrEMBL
Match: A0A6J1I5W3 (microtubule-associated protein 70-4-like OS=Cucurbita maxima OX=3661 GN=LOC111470973 PE=3 SV=1) HSP 1 Score: 136 bits (343), Expect = 2.20e-37 Identity = 77/125 (61.60%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of Csor.00g260140 vs. ExPASy TrEMBL
Match: A0A6J1H199 (uncharacterized protein LOC111459455 OS=Cucurbita moschata OX=3662 GN=LOC111459455 PE=4 SV=1) HSP 1 Score: 122 bits (306), Expect = 4.90e-32 Identity = 64/79 (81.01%), Postives = 69/79 (87.34%), Query Frame = 0
BLAST of Csor.00g260140 vs. ExPASy TrEMBL
Match: A0A6J1K7G9 (uncharacterized protein LOC111490882 OS=Cucurbita maxima OX=3661 GN=LOC111490882 PE=4 SV=1) HSP 1 Score: 119 bits (297), Expect = 1.09e-30 Identity = 64/79 (81.01%), Postives = 68/79 (86.08%), Query Frame = 0
BLAST of Csor.00g260140 vs. ExPASy TrEMBL
Match: A0A6J1CI14 (uncharacterized protein LOC111011124 OS=Momordica charantia OX=3673 GN=LOC111011124 PE=4 SV=1) HSP 1 Score: 112 bits (280), Expect = 3.96e-28 Identity = 62/78 (79.49%), Postives = 64/78 (82.05%), Query Frame = 0
BLAST of Csor.00g260140 vs. ExPASy TrEMBL
Match: A0A0A0KAW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G148170 PE=4 SV=1) HSP 1 Score: 109 bits (272), Expect = 6.18e-27 Identity = 62/78 (79.49%), Postives = 65/78 (83.33%), Query Frame = 0
BLAST of Csor.00g260140 vs. TAIR 10
Match: AT5G22930.1 (Protein of unknown function (DUF1635) ) HSP 1 Score: 48.1 bits (113), Expect = 5.3e-06 Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of Csor.00g260140 vs. TAIR 10
Match: AT3G44940.1 (Protein of unknown function (DUF1635) ) HSP 1 Score: 41.6 bits (96), Expect = 5.0e-04 Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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