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Csor.00g171390 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAACCCCGTCAAGAACAACAACAACAGCAGCAACAACAACGACCACCGGTAGCATCTGCTCTTAAGTGCCCTCGTTGTGATTCTTCCAACACCAAATTTTGTTACTACAACAATTACAGCCTTTCTCAGCCACGGCACTTCTGCAAAGCCTGTAAACGCTACTGGACCCGCGGCGGAACCCTAAGAAATGTCCCCGTCGGTGGTGGCTGCCGGAAGAACAAGCGCCTCAAATCTTCTTCTTCTTCTTCCTTCTCCTCAGTCAACGCTACTCCCACGTCAACCCCAACTCAAAAACCTCGCCTTCACAACAACTCCATCATCAATTCTGCTACTAATATTATTCCTTCTTCCCCAATGTTTTTTGGGGTTCATAACACTAACCCATCTCCCTTAAATCTTCAATTTTCAACTCTTGATTCTGTTTTCTGGTCTTCTCAACCTTTCCGCCGCCGCCGCCGTTCGACGCCATTGGCAGTGGTTTAG ATGGACAAACCCCGTCAAGAACAACAACAACAGCAGCAACAACAACGACCACCGGTAGCATCTGCTCTTAAGTGCCCTCGTTGTGATTCTTCCAACACCAAATTTTGTTACTACAACAATTACAGCCTTTCTCAGCCACGGCACTTCTGCAAAGCCTGTAAACGCTACTGGACCCGCGGCGGAACCCTAAGAAATGTCCCCGTCGGTGGTGGCTGCCGGAAGAACAAGCGCCTCAAATCTTCTTCTTCTTCTTCCTTCTCCTCAGTCAACGCTACTCCCACGTCAACCCCAACTCAAAAACCTCGCCTTCACAACAACTCCATCATCAATTCTGCTACTAATATTATTCCTTCTTCCCCAATGTTTTTTGGGGTTCATAACACTAACCCATCTCCCTTAAATCTTCAATTTTCAACTCTTGATTCTGTTTTCTGGTCTTCTCAACCTTTCCGCCGCCGCCGCCGTTCGACGCCATTGGCAGTGGTTTAG ATGGACAAACCCCGTCAAGAACAACAACAACAGCAGCAACAACAACGACCACCGGTAGCATCTGCTCTTAAGTGCCCTCGTTGTGATTCTTCCAACACCAAATTTTGTTACTACAACAATTACAGCCTTTCTCAGCCACGGCACTTCTGCAAAGCCTGTAAACGCTACTGGACCCGCGGCGGAACCCTAAGAAATGTCCCCGTCGGTGGTGGCTGCCGGAAGAACAAGCGCCTCAAATCTTCTTCTTCTTCTTCCTTCTCCTCAGTCAACGCTACTCCCACGTCAACCCCAACTCAAAAACCTCGCCTTCACAACAACTCCATCATCAATTCTGCTACTAATATTATTCCTTCTTCCCCAATGTTTTTTGGGGTTCATAACACTAACCCATCTCCCTTAAATCTTCAATTTTCAACTCTTGATTCTGTTTTCTGGTCTTCTCAACCTTTCCGCCGCCGCCGCCGTTCGACGCCATTGGCAGTGGTTTAG MDKPRQEQQQQQQQQRPPVASALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLKSSSSSSFSSVNATPTSTPTQKPRLHNNSIINSATNIIPSSPMFFGVHNTNPSPLNLQFSTLDSVFWSSQPFRRRRRSTPLAVV Homology
BLAST of Csor.00g171390 vs. ExPASy Swiss-Prot
Match: Q9FZA4 (Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana OX=3702 GN=DOF1.4 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.5e-30 Identity = 81/157 (51.59%), Postives = 100/157 (63.69%), Query Frame = 0
BLAST of Csor.00g171390 vs. ExPASy Swiss-Prot
Match: Q9M2U1 (Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana OX=3702 GN=DOF3.6 PE=1 SV=2) HSP 1 Score: 126.7 bits (317), Expect = 2.4e-28 Identity = 69/129 (53.49%), Postives = 84/129 (65.12%), Query Frame = 0
BLAST of Csor.00g171390 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2) HSP 1 Score: 125.6 bits (314), Expect = 5.3e-28 Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 0
BLAST of Csor.00g171390 vs. ExPASy Swiss-Prot
Match: O24463 (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 6.9e-28 Identity = 64/114 (56.14%), Postives = 79/114 (69.30%), Query Frame = 0
BLAST of Csor.00g171390 vs. ExPASy Swiss-Prot
Match: Q9FM03 (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV=2) HSP 1 Score: 124.8 bits (312), Expect = 9.0e-28 Identity = 56/83 (67.47%), Postives = 68/83 (81.93%), Query Frame = 0
BLAST of Csor.00g171390 vs. NCBI nr
Match: KAG6588550.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 325 bits (833), Expect = 3.90e-112 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Csor.00g171390 vs. NCBI nr
Match: KAG6604456.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 286 bits (733), Expect = 2.73e-95 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of Csor.00g171390 vs. NCBI nr
Match: KAG7034600.1 (Dof zinc finger protein DOF5.3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 286 bits (733), Expect = 2.73e-95 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of Csor.00g171390 vs. NCBI nr
Match: XP_022925833.1 (dof zinc finger protein DOF1.4 [Cucurbita moschata]) HSP 1 Score: 283 bits (724), Expect = 6.39e-94 Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of Csor.00g171390 vs. NCBI nr
Match: XP_023544408.1 (dof zinc finger protein DOF1.4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 274 bits (701), Expect = 1.76e-90 Identity = 138/143 (96.50%), Postives = 138/143 (96.50%), Query Frame = 0
BLAST of Csor.00g171390 vs. ExPASy TrEMBL
Match: A0A6J1EGC8 (dof zinc finger protein DOF1.4 OS=Cucurbita moschata OX=3662 GN=LOC111433122 PE=4 SV=1) HSP 1 Score: 283 bits (724), Expect = 3.09e-94 Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of Csor.00g171390 vs. ExPASy TrEMBL
Match: A0A6J1INW3 (dof zinc finger protein DOF1.4 OS=Cucurbita maxima OX=3661 GN=LOC111478610 PE=4 SV=1) HSP 1 Score: 259 bits (663), Expect = 4.60e-85 Identity = 135/143 (94.41%), Postives = 135/143 (94.41%), Query Frame = 0
BLAST of Csor.00g171390 vs. ExPASy TrEMBL
Match: A0A6J1EGJ0 (dof zinc finger protein DOF1.4-like OS=Cucurbita moschata OX=3662 GN=LOC111433895 PE=4 SV=1) HSP 1 Score: 178 bits (451), Expect = 5.43e-53 Identity = 99/132 (75.00%), Postives = 107/132 (81.06%), Query Frame = 0
BLAST of Csor.00g171390 vs. ExPASy TrEMBL
Match: A0A6J1KR08 (dof zinc finger protein DOF1.4-like OS=Cucurbita maxima OX=3661 GN=LOC111497470 PE=4 SV=1) HSP 1 Score: 172 bits (435), Expect = 1.19e-50 Identity = 95/132 (71.97%), Postives = 102/132 (77.27%), Query Frame = 0
BLAST of Csor.00g171390 vs. ExPASy TrEMBL
Match: A0A5A7UBU9 (Dof zinc finger protein DOF1.7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007570 PE=4 SV=1) HSP 1 Score: 171 bits (433), Expect = 2.46e-50 Identity = 99/149 (66.44%), Postives = 108/149 (72.48%), Query Frame = 0
BLAST of Csor.00g171390 vs. TAIR 10
Match: AT1G28310.1 (Dof-type zinc finger DNA-binding family protein ) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31 Identity = 81/157 (51.59%), Postives = 100/157 (63.69%), Query Frame = 0
BLAST of Csor.00g171390 vs. TAIR 10
Match: AT1G28310.2 (Dof-type zinc finger DNA-binding family protein ) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31 Identity = 81/157 (51.59%), Postives = 100/157 (63.69%), Query Frame = 0
BLAST of Csor.00g171390 vs. TAIR 10
Match: AT3G55370.1 (OBF-binding protein 3 ) HSP 1 Score: 126.7 bits (317), Expect = 1.7e-29 Identity = 69/129 (53.49%), Postives = 84/129 (65.12%), Query Frame = 0
BLAST of Csor.00g171390 vs. TAIR 10
Match: AT3G55370.2 (OBF-binding protein 3 ) HSP 1 Score: 126.7 bits (317), Expect = 1.7e-29 Identity = 69/129 (53.49%), Postives = 84/129 (65.12%), Query Frame = 0
BLAST of Csor.00g171390 vs. TAIR 10
Match: AT3G55370.3 (OBF-binding protein 3 ) HSP 1 Score: 126.7 bits (317), Expect = 1.7e-29 Identity = 69/129 (53.49%), Postives = 84/129 (65.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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