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Csor.00g029520 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCGGGGCGACGGCGCTCGGCGGCAGCGGCGGCGGGTGGTCGGAGCTCCGGCTTCGTGGGGAGTATGGAGACGATAAAAGAAAGGAGATCTGGGAAGCAACGAGTGGTGGAGGCAAAGAAATCGGTGGAGAAATGGTGGAAAGGTTCAGAGACGAAGAGGAAGCGGCGAGTGGCCAAATACAAATTTTACGCCGTGGAAGGCAAACTGAAGCGTTCCATTACCAAAGGCTTCCAATGGATCAAGAAAAGGTGCGCCAAAATCATCTATGGATTTTGA ATGGAGGCGGGGCGACGGCGCTCGGCGGCAGCGGCGGCGGGTGGTCGGAGCTCCGGCTTCGTGGGGAGTATGGAGACGATAAAAGAAAGGAGATCTGGGAAGCAACGAGTGGTGGAGGCAAAGAAATCGGTGGAGAAATGGTGGAAAGGTTCAGAGACGAAGAGGAAGCGGCGAGTGGCCAAATACAAATTTTACGCCGTGGAAGGCAAACTGAAGCGTTCCATTACCAAAGGCTTCCAATGGATCAAGAAAAGGTGCGCCAAAATCATCTATGGATTTTGA ATGGAGGCGGGGCGACGGCGCTCGGCGGCAGCGGCGGCGGGTGGTCGGAGCTCCGGCTTCGTGGGGAGTATGGAGACGATAAAAGAAAGGAGATCTGGGAAGCAACGAGTGGTGGAGGCAAAGAAATCGGTGGAGAAATGGTGGAAAGGTTCAGAGACGAAGAGGAAGCGGCGAGTGGCCAAATACAAATTTTACGCCGTGGAAGGCAAACTGAAGCGTTCCATTACCAAAGGCTTCCAATGGATCAAGAAAAGGTGCGCCAAAATCATCTATGGATTTTGA MEAGRRRSAAAAAGGRSSGFVGSMETIKERRSGKQRVVEAKKSVEKWWKGSETKRKRRVAKYKFYAVEGKLKRSITKGFQWIKKRCAKIIYGF Homology
BLAST of Csor.00g029520 vs. NCBI nr
Match: KAG6588594.1 (hypothetical protein SDJN03_17159, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020542.1 hypothetical protein SDJN02_17228, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 177 bits (450), Expect = 6.11e-56 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Csor.00g029520 vs. NCBI nr
Match: KAG6588612.1 (hypothetical protein SDJN03_17177, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 172 bits (435), Expect = 1.15e-53 Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of Csor.00g029520 vs. NCBI nr
Match: XP_013450451.1 (uncharacterized protein LOC25499646 [Medicago truncatula] >KEH24479.1 DUF3511 domain protein [Medicago truncatula] >RHN49176.1 hypothetical protein MtrunA17_Chr7g0271701 [Medicago truncatula]) HSP 1 Score: 77.0 bits (188), Expect = 1.06e-15 Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of Csor.00g029520 vs. NCBI nr
Match: EEF49942.1 (conserved hypothetical protein [Ricinus communis]) HSP 1 Score: 75.5 bits (184), Expect = 2.13e-15 Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 0
BLAST of Csor.00g029520 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia]) HSP 1 Score: 74.3 bits (181), Expect = 8.94e-15 Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0
BLAST of Csor.00g029520 vs. ExPASy TrEMBL
Match: A0A072U413 (DUF3511 domain protein OS=Medicago truncatula OX=3880 GN=25499646 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 5.14e-16 Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of Csor.00g029520 vs. ExPASy TrEMBL
Match: B9RFH1 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1434550 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.03e-15 Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 0
BLAST of Csor.00g029520 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.33e-15 Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0
BLAST of Csor.00g029520 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.62e-14 Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 0
BLAST of Csor.00g029520 vs. ExPASy TrEMBL
Match: A0A2Z7ADN2 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_31850 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.33e-13 Identity = 28/47 (59.57%), Postives = 39/47 (82.98%), Query Frame = 0
BLAST of Csor.00g029520 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 63.9 bits (154), Expect = 7.7e-11 Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 0
BLAST of Csor.00g029520 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 55.8 bits (133), Expect = 2.1e-08 Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 0
BLAST of Csor.00g029520 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 55.1 bits (131), Expect = 3.6e-08 Identity = 22/43 (51.16%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of Csor.00g029520 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 48.5 bits (114), Expect = 3.3e-06 Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of Csor.00g029520 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 47.4 bits (111), Expect = 7.4e-06 Identity = 27/65 (41.54%), Postives = 38/65 (58.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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