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CmoCh04G000010 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGTACAACTTCAAGTCAGAAATCTTCTTTGTCCTTGTGTGGTTGTTGAATATTTATTTACAAGTGCTTTCAGGTTATAATTATATTGTTATTACAAGAAGCCAATGGTTGGTATGGTGGTGCTCTCCTTGGTGATCGAGATGAAAGCAGTGAGAGCTATAAACACTATTCTGAGTTAATGTGAGGTAATCGGATTCCGTACTCGGGCTTGTTGCATTCATATTCAAATTAACAGTTATAGTTTGACATGTATTCATTTGGCTAACCATGATATGCAGTTTGAAATTTGTTCTTAATCTACTTTTTCTTTCTTTCATTATTTTTTTCGTTTTATTGTAGTATGACAAATATACTTAACAAAAAAAGTTATCCTCTTTTTGACAATTGTCTTCCTAGCAAACTTGGTAATGGGAACTCTCTGAACGCAATTTTTTCCCTCTCCAACTGATTTATTGGCTAAGAAACACTTTTATAATATATTAAGCATGCTCTTATTGTTTGAGCTTGTAAGGAATTCCTTCCTGTTCTTTTGCAAAATATTAACCAACCAACACAAATCAGAGGTAGAAGGAACTAATTTGTAACATCTTAACTGGGTTGACATTTGCATGTGTAGTTACATGACTTCTAATTGCAATTTGCATGTATATTCACATGTAAATCACAAAACACCACCGAAAGGAAGAGAGAAGAAGCTGTCAATTTGGGGGGTTCCTCTTCTTGAAGACCACCGGACGGGTGTGATTCTGCTGATGTTTTTGAGGGCGAGGGAGTTCAAAGTGAGGGATGCATTCCCTATGTTCCGAAACACAATTCGGTGGAGGGAGGAATTTGGTATCGACTCCCTTGTGGACGAGAATCTGGAGGACGATCTGGATACAGCAGGGAGAGGAGTTTTAGGAAAAGCGGACCAAGTTCTTACGTTGGAGGATTCAGCTCCTAGAAAGGAGTACTAGGAAACTTGATTTTCGTCCTGGAGGTATCTCTACTATGTCCCAAGTACGATTTCATGGTCTCCTTGCATATAAATTCCTTATCTCTAGCTCATTCTGTCCCCCGACCGCCGCCCATCGCTTTTCCTCGGAAGAAAAAGAAACCCTGAATTGACCTTTCTTTCATTGCTGAGATCTCAATTATTTTGCCTAATTAATTGATATGATCTCATTGTCATTTCAATCTTTGATTGTTTGGCTTGCATAGAGCCCCGAGATTTTTTATTATTTAATTTTCAAATTCTGAAGTATTGTGGTGGGATCCGCAGCAGCCAAGCGGGATCCACTCCTGAGAAGACCATTCCTTTATATTCTCTGATCGCTCCAAGATTGGTAAGCGACTCAGCGTTATTTGCATCGTGTACGCTTCTATAGTCGCGTTGAAATGCAGTGTCGAAACACGTGTTCCTCTACATGCACTACGTGTCGAAACACGTGTACTACGTGTCACTCCTGGTTGTGCAGCATCTTCCTGGTTGTCACTTCTGGTTTTACAGCATCTTCCTGTTTTCGACACCTTCAACATCATCATCATGCCCAACCTATTCGCTTTGTGTCTGGTCATTACTTCTTTATCTGCAGCGGGACTCTGGTCTCCTTCCCCGGCGTCCCGGCCAGATCAGGAGCAGGATGTTATCGTTAAAGAAGGTCACCGAGTGGTTGTGGTCGAGTATGGCGACCAAGGACAACAGAATACTAAGGTTTCCATCTCTTCCGAACCCACCAAAGACGCCGAAACGCACCGCACCAGAGATCTTATTTGCGATGCCTTGGGCAAATGTAAGCATAAGATAGCCAGTGCTGTGGGAAAGGCTAAAGTAATGGTTTCGGAGACGGCGCAGGAGGCCCACAACGTCGGAGAAAGGGCATCGTTAAAGGATATGAATCAATAAAGCGACATGAAATACGGAAACCATTCTACTAAAGATTGATGTTTAGCAAGTCTACCAAAAAGAAGTTTCCTTCAAACCTGGAGACGAAAATAAGTGGAATAACTGGAATTACATCATCATCATGGACCAGTTAAAAGGAAGTAAGTAGGGTTTAGGGTTCTTGCTCCCTTCTTGCTTTTTCTAATTTCAATGATTTTCCTTTTATCATTTTTTCCATTCTGCTTGTTTGTTCCTATTTTGTAGTCAGCACATGCAATTTGCAAACTTCGTGAAGTTCTGGGCGAGTCCATTTCATCTTATCATCAAGTCCTCCAATCATATATGGGAGGTACAGTTATATGATTTTACCTTCTTACCCAAATGCAATATGCTGTATCGTTTTCAGGAATAGGACCCATCTAACTTTGAAGTTTTTGCATATATTTCAGTTTGACAAACCTAGCATGAAGAAGAGGATTCTGGTATATTAACAGAATAATGGTAAAAATCTGAGCAAGCAATGACAGGAATTGATTAGCTTTGCTTTCTTTTTCTTGCTTTGACAGGGAAAACATACCATATTATATGCACTGGGTGCTATTTCAACTGTCTGCCACAAATTAATTTCTTCTGAGATGCTGCCTTGCCCAATGCCATTGTAAACCAGGTATCTTCTTCCTGCACCAAGAAAGTAAAGAAATTCCGAGAAGCCGGGTTTACCGATCTGGAGCAGGTGCAAGTTTAGGGTTTTGG ATGGCAGACCACCGGACGGGTGTGATTCTGCTGATGTTTTTGAGGGCGAGGGAGTTCAAAGTGAGGGATGCATTCCCTATGTTCCGAAACACAATTCGGTGGAGGGAGGAATTTGGTATCGACTCCCTTGTGGACGAGAATCTGGAGGACGATCTGGATACAGCAGGGAGAGGAGTTTTAGGAAAAGCGGACCAATATTGTGGTGGGATCCGCAGCAGCCAAGCGGGATCCACTCCTGAGAAGACCATTCCTTTATATTCTCTGATCGCTCCAAGATTGCATCTTCCTGTTTTCGACACCTTCAACATCATCATCATGCCCAACCTATTCGCTTTGTGTCTGGTCATTACTTCTTTATCTGCAGCGGGACTCTGGTCTCCTTCCCCGGCGTCCCGGCCAGATCAGGAGCAGGATGTTATCGTTAAAGAAGGTCACCGAGTGGTTGTGGTCGAGTATGGCGACCAAGGACAACAGAATACTAAGGTTTCCATCTCTTCCGAACCCACCAAAGACGCCGAAACGCACCGCACCAGAGATCTTATTTGCGATGCCTTGGGCAAATGTAAGCATAAGATAGCCAGTGCTGTGGGAAAGGCTAAAGTAATGGTTTCGGAGACGGCGCAGGAGGCCCACAACGTCGGAGAAAGGGCATCTCAGCACATGCAATTTGCAAACTTCGTGAAGTTCTGGGCGAGTCCATTTCATCTTATCATCAAGTCCTCCAATCATATATGGGAGTTTGACAAACCTAGCATGAAGAAGAGGATTCTGGGAAAACATACCATATTATATGCACTGGGTGCTATTTCAACTGTCTGCCACAAATTAATTTCTTCTGAGATGCTGCCTTGCCCAATGCCATTGTAAACCAGGTATCTTCTTCCTGCACCAAGAAAGTAAAGAAATTCCGAGAAGCCGGGTTTACCGATCTGGAGCAGGTGCAAGTTTAGGGTTTTGG ATGGCAGACCACCGGACGGGTGTGATTCTGCTGATGTTTTTGAGGGCGAGGGAGTTCAAAGTGAGGGATGCATTCCCTATGTTCCGAAACACAATTCGGTGGAGGGAGGAATTTGGTATCGACTCCCTTGTGGACGAGAATCTGGAGGACGATCTGGATACAGCAGGGAGAGGAGTTTTAGGAAAAGCGGACCAATATTGTGGTGGGATCCGCAGCAGCCAAGCGGGATCCACTCCTGAGAAGACCATTCCTTTATATTCTCTGATCGCTCCAAGATTGCATCTTCCTGTTTTCGACACCTTCAACATCATCATCATGCCCAACCTATTCGCTTTGTGTCTGGTCATTACTTCTTTATCTGCAGCGGGACTCTGGTCTCCTTCCCCGGCGTCCCGGCCAGATCAGGAGCAGGATGTTATCGTTAAAGAAGGTCACCGAGTGGTTGTGGTCGAGTATGGCGACCAAGGACAACAGAATACTAAGGTTTCCATCTCTTCCGAACCCACCAAAGACGCCGAAACGCACCGCACCAGAGATCTTATTTGCGATGCCTTGGGCAAATGTAAGCATAAGATAGCCAGTGCTGTGGGAAAGGCTAAAGTAATGGTTTCGGAGACGGCGCAGGAGGCCCACAACGTCGGAGAAAGGGCATCTCAGCACATGCAATTTGCAAACTTCGTGAAGTTCTGGGCGAGTCCATTTCATCTTATCATCAAGTCCTCCAATCATATATGGGAGTTTGACAAACCTAGCATGAAGAAGAGGATTCTGGGAAAACATACCATATTATATGCACTGGGTGCTATTTCAACTGTCTGCCACAAATTAATTTCTTCTGAGATGCTGCCTTGCCCAATGCCATTGTAA MADHRTGVILLMFLRAREFKVRDAFPMFRNTIRWREEFGIDSLVDENLEDDLDTAGRGVLGKADQYCGGIRSSQAGSTPEKTIPLYSLIAPRLHLPVFDTFNIIIMPNLFALCLVITSLSAAGLWSPSPASRPDQEQDVIVKEGHRVVVVEYGDQGQQNTKVSISSEPTKDAETHRTRDLICDALGKCKHKIASAVGKAKVMVSETAQEAHNVGERASQHMQFANFVKFWASPFHLIIKSSNHIWEFDKPSMKKRILGKHTILYALGAISTVCHKLISSEMLPCPMPL Homology
BLAST of CmoCh04G000010 vs. ExPASy Swiss-Prot
Match: Q56Z59 (Patellin-3 OS=Arabidopsis thaliana OX=3702 GN=PATL3 PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 1.5e-12 Identity = 34/53 (64.15%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of CmoCh04G000010 vs. ExPASy Swiss-Prot
Match: Q9M0R2 (Patellin-5 OS=Arabidopsis thaliana OX=3702 GN=PATL5 PE=1 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 8.8e-10 Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of CmoCh04G000010 vs. ExPASy Swiss-Prot
Match: Q56ZI2 (Patellin-2 OS=Arabidopsis thaliana OX=3702 GN=PATL2 PE=1 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 4.4e-09 Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of CmoCh04G000010 vs. ExPASy Swiss-Prot
Match: Q94C59 (Patellin-4 OS=Arabidopsis thaliana OX=3702 GN=PATL4 PE=1 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 4.8e-08 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of CmoCh04G000010 vs. ExPASy Swiss-Prot
Match: Q56WK6 (Patellin-1 OS=Arabidopsis thaliana OX=3702 GN=PATL1 PE=1 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06 Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of CmoCh04G000010 vs. ExPASy TrEMBL
Match: A0A6J1FL32 (uncharacterized protein LOC111444965 OS=Cucurbita moschata OX=3662 GN=LOC111444965 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 4.6e-46 Identity = 104/129 (80.62%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of CmoCh04G000010 vs. ExPASy TrEMBL
Match: A0A6J1JR64 (uncharacterized protein LOC111489083 OS=Cucurbita maxima OX=3661 GN=LOC111489083 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 7.9e-46 Identity = 104/129 (80.62%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of CmoCh04G000010 vs. ExPASy TrEMBL
Match: A0A6J1DI19 (uncharacterized protein LOC111020246 OS=Momordica charantia OX=3673 GN=LOC111020246 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 8.8e-37 Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 0
BLAST of CmoCh04G000010 vs. ExPASy TrEMBL
Match: A0A1S3CA56 (uncharacterized protein LOC103498695 OS=Cucumis melo OX=3656 GN=LOC103498695 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 4.1e-34 Identity = 86/126 (68.25%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of CmoCh04G000010 vs. ExPASy TrEMBL
Match: A0A5D3BMZ0 (DUF4149 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00490 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 9.1e-34 Identity = 82/113 (72.57%), Postives = 92/113 (81.42%), Query Frame = 0
BLAST of CmoCh04G000010 vs. NCBI nr
Match: XP_023550065.1 (uncharacterized protein LOC111808367 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194.9 bits (494), Expect = 9.6e-46 Identity = 104/129 (80.62%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of CmoCh04G000010 vs. NCBI nr
Match: KAG7015871.1 (Transmembrane protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194.9 bits (494), Expect = 9.6e-46 Identity = 104/129 (80.62%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of CmoCh04G000010 vs. NCBI nr
Match: XP_022938890.1 (uncharacterized protein LOC111444965 [Cucurbita moschata] >XP_023550066.1 uncharacterized protein LOC111808367 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550068.1 uncharacterized protein LOC111808367 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194.9 bits (494), Expect = 9.6e-46 Identity = 104/129 (80.62%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of CmoCh04G000010 vs. NCBI nr
Match: XP_022992882.1 (uncharacterized protein LOC111489083 [Cucurbita maxima]) HSP 1 Score: 194.1 bits (492), Expect = 1.6e-45 Identity = 104/129 (80.62%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of CmoCh04G000010 vs. NCBI nr
Match: KAG6578300.1 (Transmembrane protein 205, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 191.8 bits (486), Expect = 8.1e-45 Identity = 103/129 (79.84%), Postives = 105/129 (81.40%), Query Frame = 0
BLAST of CmoCh04G000010 vs. TAIR 10
Match: AT1G72100.1 (late embryogenesis abundant domain-containing protein / LEA domain-containing protein ) HSP 1 Score: 81.3 bits (199), Expect = 1.4e-15 Identity = 60/166 (36.14%), Postives = 79/166 (47.59%), Query Frame = 0
BLAST of CmoCh04G000010 vs. TAIR 10
Match: AT1G72160.1 (Sec14p-like phosphatidylinositol transfer family protein ) HSP 1 Score: 75.1 bits (183), Expect = 1.0e-13 Identity = 34/53 (64.15%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of CmoCh04G000010 vs. TAIR 10
Match: AT1G22600.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 65.9 bits (159), Expect = 6.3e-11 Identity = 44/123 (35.77%), Postives = 61/123 (49.59%), Query Frame = 0
BLAST of CmoCh04G000010 vs. TAIR 10
Match: AT4G09160.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein ) HSP 1 Score: 65.9 bits (159), Expect = 6.3e-11 Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of CmoCh04G000010 vs. TAIR 10
Match: AT1G22530.1 (PATELLIN 2 ) HSP 1 Score: 63.5 bits (153), Expect = 3.1e-10 Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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