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CmaCh16G008680 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATGCCGATGAGTGAGGAGGAGGAACTGGTGGAGACGTTGAAGAGGAAGCTGAATGCCGATGACGGTGCTTCGAGATCTTCGAGAGGGACGACGACGACGACGACGGAGGTGAAGATTAGGATGACAAAGAGAGAGCTGGAGAAGTTATTGAGCAAAGTGGAAGTGGAGGAGCTGCCAGTGACGGAGCTGTTATTGCAGTTGATTGAGGTTGGGGATGAGTCGGAGAGTACTCATCGGCGATCATGGCGACCATCTTTGCAAAGCATTCCTGAGCTGTGCTGA ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATGCCGATGAGTGAGGAGGAGGAACTGGTGGAGACGTTGAAGAGGAAGCTGAATGCCGATGACGGTGCTTCGAGATCTTCGAGAGGGACGACGACGACGACGACGGAGGTGAAGATTAGGATGACAAAGAGAGAGCTGGAGAAGTTATTGAGCAAAGTGGAAGTGGAGGAGCTGCCAGTGACGGAGCTGTTATTGCAGTTGATTGAGGTTGGGGATGAGTCGGAGAGTACTCATCGGCGATCATGGCGACCATCTTTGCAAAGCATTCCTGAGCTGTGCTGA ATGGGAAATTGTACAAGCAACAAATATTTGGCAGAGACAATGCCGATGAGTGAGGAGGAGGAACTGGTGGAGACGTTGAAGAGGAAGCTGAATGCCGATGACGGTGCTTCGAGATCTTCGAGAGGGACGACGACGACGACGACGGAGGTGAAGATTAGGATGACAAAGAGAGAGCTGGAGAAGTTATTGAGCAAAGTGGAAGTGGAGGAGCTGCCAGTGACGGAGCTGTTATTGCAGTTGATTGAGGTTGGGGATGAGTCGGAGAGTACTCATCGGCGATCATGGCGACCATCTTTGCAAAGCATTCCTGAGCTGTGCTGA MGNCTSNKYLAETMPMSEEEELVETLKRKLNADDGASRSSRGTTTTTTEVKIRMTKRELEKLLSKVEVEELPVTELLLQLIEVGDESESTHRRSWRPSLQSIPELC Homology
BLAST of CmaCh16G008680 vs. ExPASy TrEMBL
Match: A0A6J1J7P7 (uncharacterized protein LOC111483315 OS=Cucurbita maxima OX=3661 GN=LOC111483315 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.1e-48 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CmaCh16G008680 vs. ExPASy TrEMBL
Match: A0A6J1EVV2 (uncharacterized protein LOC111438472 OS=Cucurbita moschata OX=3662 GN=LOC111438472 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 8.8e-43 Identity = 97/106 (91.51%), Postives = 100/106 (94.34%), Query Frame = 0
BLAST of CmaCh16G008680 vs. ExPASy TrEMBL
Match: A0A6J1DBT0 (uncharacterized protein LOC111019048 OS=Momordica charantia OX=3673 GN=LOC111019048 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.5e-29 Identity = 80/108 (74.07%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of CmaCh16G008680 vs. ExPASy TrEMBL
Match: A0A5D3BTQ9 (DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00050 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.4e-27 Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 0
BLAST of CmaCh16G008680 vs. ExPASy TrEMBL
Match: A0A1S3CJ77 (uncharacterized protein LOC103501580 OS=Cucumis melo OX=3656 GN=LOC103501580 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.4e-27 Identity = 72/106 (67.92%), Postives = 90/106 (84.91%), Query Frame = 0
BLAST of CmaCh16G008680 vs. NCBI nr
Match: XP_022985276.1 (uncharacterized protein LOC111483315 [Cucurbita maxima]) HSP 1 Score: 202.2 bits (513), Expect = 2.2e-48 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CmaCh16G008680 vs. NCBI nr
Match: KAG6577418.1 (hypothetical protein SDJN03_24992, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189.1 bits (479), Expect = 1.9e-44 Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of CmaCh16G008680 vs. NCBI nr
Match: XP_022932152.1 (uncharacterized protein LOC111438472 [Cucurbita moschata]) HSP 1 Score: 182.6 bits (462), Expect = 1.8e-42 Identity = 97/106 (91.51%), Postives = 100/106 (94.34%), Query Frame = 0
BLAST of CmaCh16G008680 vs. NCBI nr
Match: XP_038904231.1 (uncharacterized protein LOC120090574 [Benincasa hispida]) HSP 1 Score: 145.2 bits (365), Expect = 3.2e-31 Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 0
BLAST of CmaCh16G008680 vs. NCBI nr
Match: XP_022151029.1 (uncharacterized protein LOC111019048 [Momordica charantia]) HSP 1 Score: 138.7 bits (348), Expect = 3.0e-29 Identity = 80/108 (74.07%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of CmaCh16G008680 vs. TAIR 10
Match: AT4G21920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05 Identity = 29/86 (33.72%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of CmaCh16G008680 vs. TAIR 10
Match: AT3G20340.1 (Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ) HSP 1 Score: 44.7 bits (104), Expect = 5.5e-05 Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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