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Carg27083 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAGTAGGTGTGGTAGAACTGCAAATGCGAGACAGTACATTAGATCCAAAGTCCCAAGATTGAGATGGACTCCTGAGCTTCATCACTCCTTTGTTCTTGCCATTCAAACACTTGGTGGCCATCAAAGTAACTTCTTTTTCTTACTTCTACTCCTTTTACAGTTCAAACACATGGAAGTCAAAGTTTTTTCATTTTGGATTCATGGTTTTTGTTTGGTTGAATTAGAAGCTGCGCCTAAGCTTGTTCTACAGCTGATGGATGCCAAGGGACTCACCATTTCACACGTAAAGAGCCATCTCCAGGTCTTGTCTTTCTCCCTCTCTCGCTAAATAAAAGTCAACACATTTCTCATTTGGGTTGGATTCATATTCTTCTATATATGTTTCTTTGGGACAGATGTATAGGAGTGTGAGGGCTGATATGGGAAGACAAGGTACAATAATTATAATTTAGGCCATACTGACATGGTTTTCTTTTACCTTTTTTGGGTTATTTAGAAAATAAGAAAACAATTAATGTTTATGAATATAACCCTCTTTATTATTTCAAATTTAACCCGATGTTTTATTATTTTTAGTTCATACACAAATTGTTGTAAATGGCACAAAAAGCTATTGCCCTTTCAACTCCTAATATTAGCAATTTTCCTGTACACACATTTCCGGCGTAAATTTTGTTTTCTTTTCAATAATGAATTTTTGTTTGGTTCACAGATCTAAATTCTTCAACCCTTAAAAGAAAGCCTAGTATCTTCGAGGACGAGGAGGAAGACGAAGACGACTGGTGCGTAGAAGAAGAAAACGCGAGGGATTTGGGCGAAGTAGCAAAGGGAGGCGATCAAGAACAGCTCAAATTTCAGCGTCAAAAAGGTGCCTGAAGTAACAACAAACATTGGGTATTCGTTTGTCATTGTTTTTCCCTTCTTTGTCTCTATTAACATGTTTTCTTCTCATATTCTGATCATATCAGCGCAAAAATCTGGAGCTGGGGCGAGGAACAAATAATATATAGGAACAGTTTGAATCGATACTATTCTTATGATTGCCAAGGAGATAGAGAGGGAATGGAGCATCCAAAGATAAAGATGATGCCTAATTCTAAATCAGACCGCGTTGCAGTGAACGAATCTGCTACTGTTAAACAAGAGGGACATCGAAGAGAAGAAGAAGAGAAGGAGAAAGAAAGCAAGTTCTTTGAACTATCTCTATCTCTATCTTTACAACATCACGATCATCATTCAAGCACTGAAATCTGTGAGGCAATTTCTTCTCCTTGTTCAAAGTTGGATAAAAATAATTACAATCACATAGATTGTTGGAGTTGGTGTTCTATAAGGCAACAGCAGAAAATTGGTGTGAATTTAGAGTTGTCAATGGCGCATTTTGGTGGCTAA ATGAGTAGTAGGTGTGGTAGAACTGCAAATGCGAGACAGTACATTAGATCCAAAGTCCCAAGATTGAGATGGACTCCTGAGCTTCATCACTCCTTTGTTCTTGCCATTCAAACACTTGGTGGCCATCAAAAAGCTGCGCCTAAGCTTGTTCTACAGCTGATGGATGCCAAGGGACTCACCATTTCACACGTAAAGAGCCATCTCCAGATGTATAGGAGTGTGAGGGCTGATATGGGAAGACAAGATCTAAATTCTTCAACCCTTAAAAGAAAGCCTAGTATCTTCGAGGACGAGGAGGAAGACGAAGACGACTGGTGCGTAGAAGAAGAAAACGCGAGGGATTTGGGCGAAGTAGCAAAGGGAGGCGATCAAGAACAGCTCAAATTTCAGCGTCAAAAAGTAACAACAAACATTGGGTATTCGTTTGTCATTGTTTTTCCCTTCTTTGTCTCTATTAACATCGCAAAAATCTGGAGCTGGGGCGAGGAACAAATAATATATAGGAACAGTTTGAATCGATACTATTCTTATGATTGCCAAGGAGATAGAGAGGGAATGGAGCATCCAAAGATAAAGATGATGCCTAATTCTAAATCAGACCGCGTTGCAGTGAACGAATCTGCTACTGTTAAACAAGAGGGACATCGAAGAGAAGAAGAAGAGAAGGAGAAAGAAAGCAAGTTCTTTGAACTATCTCTATCTCTATCTTTACAACATCACGATCATCATTCAAGCACTGAAATCTGTGAGGCAATTTCTTCTCCTTGTTCAAAGTTGGATAAAAATAATTACAATCACATAGATTGTTGGAGTTGGTGTTCTATAAGGCAACAGCAGAAAATTGGTGTGAATTTAGAGTTGTCAATGGCGCATTTTGGTGGCTAA ATGAGTAGTAGGTGTGGTAGAACTGCAAATGCGAGACAGTACATTAGATCCAAAGTCCCAAGATTGAGATGGACTCCTGAGCTTCATCACTCCTTTGTTCTTGCCATTCAAACACTTGGTGGCCATCAAAAAGCTGCGCCTAAGCTTGTTCTACAGCTGATGGATGCCAAGGGACTCACCATTTCACACGTAAAGAGCCATCTCCAGATGTATAGGAGTGTGAGGGCTGATATGGGAAGACAAGATCTAAATTCTTCAACCCTTAAAAGAAAGCCTAGTATCTTCGAGGACGAGGAGGAAGACGAAGACGACTGGTGCGTAGAAGAAGAAAACGCGAGGGATTTGGGCGAAGTAGCAAAGGGAGGCGATCAAGAACAGCTCAAATTTCAGCGTCAAAAAGTAACAACAAACATTGGGTATTCGTTTGTCATTGTTTTTCCCTTCTTTGTCTCTATTAACATCGCAAAAATCTGGAGCTGGGGCGAGGAACAAATAATATATAGGAACAGTTTGAATCGATACTATTCTTATGATTGCCAAGGAGATAGAGAGGGAATGGAGCATCCAAAGATAAAGATGATGCCTAATTCTAAATCAGACCGCGTTGCAGTGAACGAATCTGCTACTGTTAAACAAGAGGGACATCGAAGAGAAGAAGAAGAGAAGGAGAAAGAAAGCAAGTTCTTTGAACTATCTCTATCTCTATCTTTACAACATCACGATCATCATTCAAGCACTGAAATCTGTGAGGCAATTTCTTCTCCTTGTTCAAAGTTGGATAAAAATAATTACAATCACATAGATTGTTGGAGTTGGTGTTCTATAAGGCAACAGCAGAAAATTGGTGTGAATTTAGAGTTGTCAATGGCGCATTTTGGTGGCTAA MSSRCGRTANARQYIRSKVPRLRWTPELHHSFVLAIQTLGGHQKAAPKLVLQLMDAKGLTISHVKSHLQMYRSVRADMGRQDLNSSTLKRKPSIFEDEEEDEDDWCVEEENARDLGEVAKGGDQEQLKFQRQKVTTNIGYSFVIVFPFFVSINIAKIWSWGEEQIIYRNSLNRYYSYDCQGDREGMEHPKIKMMPNSKSDRVAVNESATVKQEGHRREEEEKEKESKFFELSLSLSLQHHDHHSSTEICEAISSPCSKLDKNNYNHIDCWSWCSIRQQQKIGVNLELSMAHFGG Homology
BLAST of Carg27083 vs. NCBI nr
Match: KAG7030526.1 (putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 593.6 bits (1529), Expect = 9.4e-166 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
BLAST of Carg27083 vs. NCBI nr
Match: XP_038892743.1 (putative Myb family transcription factor At1g14600 isoform X1 [Benincasa hispida]) HSP 1 Score: 274.6 bits (701), Expect = 9.7e-70 Identity = 170/306 (55.56%), Postives = 204/306 (66.67%), Query Frame = 0
BLAST of Carg27083 vs. NCBI nr
Match: XP_038892744.1 (putative Myb family transcription factor At1g14600 isoform X2 [Benincasa hispida]) HSP 1 Score: 266.5 bits (680), Expect = 2.6e-67 Identity = 168/306 (54.90%), Postives = 202/306 (66.01%), Query Frame = 0
BLAST of Carg27083 vs. NCBI nr
Match: XP_022941925.1 (putative Myb family transcription factor At1g14600 [Cucurbita moschata] >XP_022941926.1 putative Myb family transcription factor At1g14600 [Cucurbita moschata] >XP_022941927.1 putative Myb family transcription factor At1g14600 [Cucurbita moschata] >XP_022941928.1 putative Myb family transcription factor At1g14600 [Cucurbita moschata]) HSP 1 Score: 265.4 bits (677), Expect = 5.9e-67 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Carg27083 vs. NCBI nr
Match: XP_016902518.1 (PREDICTED: putative Myb family transcription factor At1g14600 [Cucumis melo]) HSP 1 Score: 260.4 bits (664), Expect = 1.9e-65 Identity = 173/314 (55.10%), Postives = 199/314 (63.38%), Query Frame = 0
BLAST of Carg27083 vs. ExPASy Swiss-Prot
Match: A3AWH5 (Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOF1 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.2e-23 Identity = 68/134 (50.75%), Postives = 76/134 (56.72%), Query Frame = 0
BLAST of Carg27083 vs. ExPASy Swiss-Prot
Match: Q700D9 (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2) HSP 1 Score: 106.7 bits (265), Expect = 4.6e-22 Identity = 59/107 (55.14%), Postives = 72/107 (67.29%), Query Frame = 0
BLAST of Carg27083 vs. ExPASy Swiss-Prot
Match: A0A0P0X0C0 (Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN=MPH1 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.7e-16 Identity = 49/107 (45.79%), Postives = 70/107 (65.42%), Query Frame = 0
BLAST of Carg27083 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.2e-15 Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of Carg27083 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 83.6 bits (205), Expect = 4.2e-15 Identity = 36/59 (61.02%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of Carg27083 vs. ExPASy TrEMBL
Match: A0A6J1FMF8 (putative Myb family transcription factor At1g14600 OS=Cucurbita moschata OX=3662 GN=LOC111447141 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 2.9e-67 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Carg27083 vs. ExPASy TrEMBL
Match: A0A1S4E2S3 (putative Myb family transcription factor At1g14600 OS=Cucumis melo OX=3656 GN=LOC103499093 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 9.2e-66 Identity = 173/314 (55.10%), Postives = 199/314 (63.38%), Query Frame = 0
BLAST of Carg27083 vs. ExPASy TrEMBL
Match: A0A0A0KSV1 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G276460 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 7.8e-65 Identity = 172/302 (56.95%), Postives = 196/302 (64.90%), Query Frame = 0
BLAST of Carg27083 vs. ExPASy TrEMBL
Match: A0A6J1E1Y6 (putative Myb family transcription factor At1g14600 OS=Momordica charantia OX=3673 GN=LOC111025236 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 1.2e-60 Identity = 166/317 (52.37%), Postives = 200/317 (63.09%), Query Frame = 0
BLAST of Carg27083 vs. ExPASy TrEMBL
Match: A0A6J1JVP9 (putative Myb family transcription factor At1g14600 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490114 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51 Identity = 149/301 (49.50%), Postives = 170/301 (56.48%), Query Frame = 0
BLAST of Carg27083 vs. TAIR 10
Match: AT1G14600.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 106.7 bits (265), Expect = 3.3e-23 Identity = 59/107 (55.14%), Postives = 72/107 (67.29%), Query Frame = 0
BLAST of Carg27083 vs. TAIR 10
Match: AT2G02060.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.5e-20 Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 0
BLAST of Carg27083 vs. TAIR 10
Match: AT2G42660.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.5e-20 Identity = 71/208 (34.13%), Postives = 104/208 (50.00%), Query Frame = 0
BLAST of Carg27083 vs. TAIR 10
Match: AT2G38300.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.5e-20 Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 0
BLAST of Carg27083 vs. TAIR 10
Match: AT2G40260.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 96.3 bits (238), Expect = 4.4e-20 Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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