Chrysanthenum transcriptome database

Information for unigene UN93826

FASTA Sequence

Unigene ID: UN93826	Length: 3152	SSR
GGCACAACAATAACTTTTGAATTAAGCATGGCCCATAAAGACTCTTAGTCCATTTACATCTCCGTCATTTTTAATTTTTTTTACTT TCATAAAACGGAAATCACTATCAATATCAAAACTAGTTCAGGTGCTTACTTGGATCTCCAACCCCGAGATCAGATAGATCATCCCC AAAAGAAGATGAACCATACAAACTCCTCCTTTCAGCAGCTCGATCCCGATAGGTGGTATGAGGCTGTTCTTTAACAGATGAAGCTG ACTGTGCAGGCAACTCAGAAAACCGTCTCTTACCGCTCACAGTAGGTGCTGGTGGTGTGTAAGAGCCTAAAGCCGATGCGTCTGTC CTAAATGGCACTGCTGAATTGCGTGCTTCAGTGGCCATTGATGAACCGATAGACACATTTGTAGATGGTGCCACATATGCAGTATC TGATTTCACCACTCCTCTACCGGATCCCCTTATTACGCCTCTTAAAGTCCCTCCAGAGATGTTAGCTGCAAGCCTGGGGATATCCT GTGCATCTAAACTGTCAGGCTGAACAGATGTGTTCACAGAAACTGCTGGAGCTGTATTGTCATTTACTAATTTGCCCTTTGTTGAT GATCCAGTAGGGTTCGATCTTTCTTCTGTTAGAGCAGATGAATTGCCATCAAGAGCCACCCGTGGTGCTTGACTTTCGTGACTCCT CTGCTTCCACATGGATAATACATTACTCATTTTCTTCTTGTTAGCCAATATACTACTTTTCGAGGCGAGTTTTATTTCTTTCATCC TCTCTTTCTCCTTTTTCTCTGCAGCCAAGGCAGCAGCAGCAGCAGCCTGAACAGCATCCGGCAATGAAGTAGTCTTATCACTTGAT GTTATTGTAGCTGCTGGTGCAGATATAACTACTTTTCTACTGTTAGAACCATCAGGCGCCTTGGAGGGTTCGTTCTCTTTTCCAGA TGTGTTACCATTTTGATCATTACAAGGGACATACTGCTGACTTTGGTGATCATAAGAATACCATATCCCATTATTACCATCGTAGT ACAGACCTGTATTTCCATCGTAGTAGAATCCAGAAGAAGCATCATAGTAATAGCCAGATGCTTCATCCCAAACAAAACCAGCTTGT GGAGCTGAAGCATCCTTTGGATCTCCACTCTGGTCCTGATTGCCATTAGATTGTTTGTCATCGGGATTGTATTCTTTTGGCGCCCA TCCAACAGCATCATACTGCTGAGAAAACGCTGCAGCCTCGATTGCTGCAGCGGCAAGGCTACTAGAGTGAGAAGAGGATGCACCAG ATCCTGGCCCAAGGATGCTTTTTGCATATGCTACTCGTAAAATTTGGCCATTTTTTTCCAGTGTTGTTCCATTTGTTGCTTCAAGG GCTTTGGTGGCATCTTCAACCGAATGGAAATGTACAAATGCAAATCCTCTTGAAACATGAGTAAATTTGTCTCTAACAAGACGAAT ATCCTTAATTGGAGCATTCTTAGAAAACTCATAGCGAAGCATTTCCTCATCAGCATTTTCATCCAATCCTCTCACAACCAATACAT GAGTGGGACCTGTCTCTCCTTTCTTACCAAATGAAGTAGGGTTTGATGATGACATGTCAGCCAGCGGAGCATCGTCTGTCCTAGGT TCATTACACTGAAAGCACGATGTCCTCCGTGCAAAATTGACGCAGCCACATATTATGCACATCCAATCAGAAATTAGTGTAGTTCT GTGGTTCATATGACCTGACCTCGATGAACCATCTGATCCGGAAAAAGGTCCACCAGCACTCCCTGTTGGCTTACTACTGTACTCAA AGAATAGCTTCCTACCATCTACGACAACACCCTCATCTCCAACCTTGTCCATCATCGAACGGGCAGATCCCGTGGAAGGAAAATCT ATAAATGCAAATCCACGGGAAGTGCCAGAATTCCGCTCCTTTATGACACGAACATGGCGAAGAGGTCCCCATTCAGAAAGAATTTG ATGCAGATCTTCTTCAGTTGTCTTTTGGGACAGACCCTTCACAACGACAGTAGCAGATGGAACCGCTGAATAATACTCATGATGAC GTTTTTCTTCACGATCTCTTCTTCTATCATACCTATCATCATCGTAACTGTCCTCCCGGTGACTTCGGCCACGACTACGACTTCGA GAAGATCTAGACCTAACACGCTCATCCTGTCCATGAGACCGAGACCTAGAACGCTCGTGCCTTTTGTATGGACTTTGATCCCTTTC TCGACTCAAACCTTTCCTCTCCCTTTCTCGATCACGGGATTCACGCCTTCGCCAACTACCCTCCCGTCTACCACCTCTGTCATAAT CAGAATCATAACTGCGTCTTCCATAATCATAATCTCTGTCACGGCTATCCTCCCTGCTCTGTGACATACGAGGCCTGTAGTCATAG TCGTCGTATGGATAATCATCACGGTCCCGTCCACTATATCTCTGAGACCTTTCATAACCATGGTCATCATAGTAATCAGCGTCACG ATATCTGCCAGCTTCACGACCCATATCCATTTCAGGATACGGATCAACATGCCGCCTTGAATCTCTATCAAGAGGATATTCTTCCT CATAAGTTCGTCTTCTAGATTGAGGCCAGACTCCACCTGCTGCAGGCGGAGGAGGATAATTCTCCCTCTCCAATACATCCCGAGGG AAGGCGTTTCTTGGATAGATGTCATCTCTTGGAAAACGTTCATCTAAATATCTCCTATCATCATATGAATCACCCGCACGAAAATG AGGTTCGTGGACAGCACCATACCGTTCGGGGGCCTGTGGATTCAAGACAATAAGGTGTGTCAGCAAGTTATAAGGATGGAACTAGA ACGATAATCGATTCCATATCCTCACTGTCCCGTGACTTGCTCTCATAGTGGTGGAATATATGAGAGTCACAAAAGCCCTAACATCT TGTATATCATCCCATATATGTGATTAAAAAGAAAACCACAATTACGCTGTTATTTTCCCATCCATGCTGAGGACCATAGCGACCAG GATCCATTTGAAACACCCGTCAATGCTACCCCTGCAAAGCTCTCGATGATCGCTTACGTTACAAAGCTTTCCGCTTAATCCGATCG ATCAAATTAGGTTAAATTCTTCGAACGTAATCAGACAAATAGATCGATGATTGTTT

Annotation (GO annotation)

GenBank top hits (Blast detail)	Score	e value
XP_003530540 PREDICTED: uncharacterized protein LOC100787998 [Glycine max]	1937	4e-214
NP_001046007 Os02g0167500 [Oryza sativa Japonica Group]	1526	2e-166
BAD26240 putative RNA-binding protein 10 [Oryza sativa Japonica Group]	1526	2e-166
XP_002876248 nucleic acid binding protein [Arabidopsis lyrata subsp. lyrata]	1526	2e-166
NP_001190084 RNA-binding protein 5/10 [Arabidopsis thaliana]	1512	7e-165

Swiss-Prot top hits (Blast detail)	Score	e value
Q3ZBT6 Transformer-2 protein homolog beta	147	4e-008
P62995 Transformer-2 protein homolog beta	147	4e-008
P62996 Transformer-2 protein homolog beta	147	4e-008
P62997 Transformer-2 protein homolog beta	147	4e-008
Q7TN31 Angiogenic factor with G patch and FHA domains 1	145	7e-008

TrEMBL top hits (Blast detail)	Score	e value
I1KWZ2 Uncharacterized protein	1937	4e-214
D7LUR8 Nucleic acid binding protein	1526	2e-166
I1NXL6 Uncharacterized protein (Fragment)	1526	2e-166
Q6H4V8 Os02g0167500 protein	1526	2e-166
Q6H4V9 Putative RNA-binding protein 10	1526	2e-166

Arabidopsis top hits (Blast detail)	Score	e value
AT3G54230.1 nucleic acid binding / nucleotide binding / zinc ion binding	1598	2e-177
AT5G09390.1 CD2-binding protein-related	150	2e-009
AT5G61030.1 GR-RBP3 (glycine-rich RNA-binding protein 3); ATP binding / RNA binding	131	2e-007
AT5G09390.2 CD2-binding protein-related	131	2e-007
AT1G07350.1 transformer serine/arginine-rich ribonucleoprotein, putative	125	1e-006