Chrysanthenum transcriptome database

Information for unigene UN82219

FASTA Sequence
Unigene ID: UN82219Length: 1397 SSR
CTATTGAGAAAATATGTATGTAAAAAAGATGGTTTATTATTTTTTGGCGAAATTTAGAAACGCAAAAACCAAAAAAATAAGCATCA
ATGGATGGCTATGGCTAACCAAGAGGAGCCTCGGTGCACCAGAGTCTCAAGTCGCCATTTTGTCATCAAATTTAACAAATGCTATA
TCACAAGATATCCAGTCGGACCAGTCCTCAGTTGATCATGAAGATGATTCCGGAAGCAAATCACTCCTGCTTTTATCTCTCTTCAA
TTTGGCTTTGACTTTGACCCGTGACTTCGACACAAGGGTTTCAACTGTGTTTGTGAAATTACCGACAGCCATAATTATCAGAAGGG
TTCCACAGGTAATCACCTGCCACTCGGAAGTGACACCATCCAGTGCGGTTTTCAGCAATAGCAGACCCACGTAAGCTTCAAAGGCC
TGTAAGACAAAGAGTATGGGGTATAACAACCATATTTGACCTTCTACTCCTGCAGTTTCTCCCCACACAACGTCCATTCTTCTAGC
CTTTCCTAGTGCAATGCGTGTATAGAGTCTCTGCCGTTGGTATCGATTTTGGAGAAGCATTGCTACTCCTTGCATGATTGCCCATC
TCAAAAATAATTGTATACCTTTCTGCTTCTGGGCACAGTCAGGTTGCCTTTCTATTTCCCAAGTGAGGCTGATAAGTGCCATAGCC
ATAGCACAATAATGATGGTATATCCACCATGGACGTATATCGCTTCCATTAACTCTCAAAATATTTTCTCTTAAAGCTAACCCAGT
GTAGAGAAAGAGCAACCACGCCTGGTAAAGCTGGACAGGTAATGCAGGGAAACATCCATCCCAAAGCCACGATCTTAACCCCAGTA
GCAGTGATGGAAAAATCAGAAACAGATATGCAGTTCTATCTCTGAAACTATAGTATTCCTCCTTCACTTTCAATTGAACATCCTTT
CTGTTAGCACGGACATTTATTGGACCAAGAAACATTCTCAAAAACCTTCCATGTGATTTACAAGGAAGAAAAGTAGCAGCATCTCC
TTCACTTAATGTATAACTTGCTCTACTTAAATCTTCACCCAATTTATCTGCATGTTTAGAATCCAAAGCCCCTTTTTTAACTTCAG
AAGCAATAAAAGACTTGATAATCTTGATATTAGAATCAAGAGCTAAAGCTCGTTGTCTTAAAGAAGCTTCTTCAATTGAATTTTTA
GATATTAAATTCGACGCTGATTCTTGTAACTCTTTACTTTCTTCTATTATTCTATTCACTTCTGAACACACGTCCCTATCACTATC
ACTACCACCCGTTGTTGTTGTTGTTGGTGGTGTTGTTGAATCGCCCATCGGTAATAGATTTGATTATTTATATGTGTGTGTTTTTT
GGTGTTTTTTCCGGCAGGCGG

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
CBI34643 unnamed protein product [Vitis vinifera]12676e-137
XP_002276903 PREDICTED: transmembrane protein 120 homolog isoform 1 [Vitis vinifera]12552e-135
XP_003592828 Transmembrane protein 120 [Medicago truncatula]12221e-131
NP_001241531 uncharacterized protein LOC100789483 [Glycine max]12084e-130
XP_003556566 PREDICTED: transmembrane protein 120 homolog [Glycine max]12041e-129

Swiss-Prot top hits (Blast detail)Scoree value
Q54IK2 Transmembrane protein 120 homolog3236e-029
Q5HZE2 Transmembrane protein 120A2422e-019
Q05B45 Transmembrane protein 120A2412e-019
Q8C1E7 Transmembrane protein 120A2412e-019
Q9BXJ8 Transmembrane protein 120A2403e-019

TrEMBL top hits (Blast detail)Scoree value
D7TVW8 Putative uncharacterized protein12677e-137
B9RYZ8 Putative uncharacterized protein12515e-135
B8LLE5 Putative uncharacterized protein12247e-132
G7IAZ3 Transmembrane protein 12012221e-131
B9I0N0 Predicted protein12103e-130

Arabidopsis top hits (Blast detail)Scoree value
AT4G10430.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TMPIT-like (InterPro:IPR012926); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33230.1); Has 196 Blast hits to 196 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 146; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).11991e-131
AT4G10430.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TMPIT-like (InterPro:IPR012926); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33230.1); Has 196 Blast hits to 196 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 146; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).11991e-131
AT1G33230.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TMPIT-like (InterPro:IPR012926); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10430.3); Has 198 Blast hits to 198 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 148; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).11821e-129
AT4G10430.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: TMPIT-like (InterPro:IPR012926); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33230.1); Has 192 Blast hits to 192 proteins in 60 species: Archae - 0; Bacteria - 0; Metazoa - 142; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).8343e-089