Chrysanthenum transcriptome database

Information for unigene UN72178

FASTA Sequence
Unigene ID: UN72178Length: 1187 SSR
CTACAACTTTGTTTATTGTTTATTAACATGACATTTGTAAAATGTTTCCAGGCAACAAATAGGGTTGCGTATTTTGAGTTTACAAA
GTTATAAATGTATAGCACAAAACCTATAGATCCAGATTTTAGAGCTTGAAGCAGCTGAAATTAACAAAACCAACGGTTTTGTCCTG
CTGAACCCGCATAGTTTTCTGGCTATCAACATTAATGTCACGCTGAGATGGAGCAGTTGAGGATGGAGAGGGTGGCCCGGAAGTCA
ACTGGTCTTGCAATGACACTTCTTTTCCTTCACATATGACTTTAACTTCACAAAAATGTGGAGCGTTGTGTACTATTTGATCGAGA
GTCCCTGCTCCACTGCCTCTCTTGAGTTTCCTTACGGACGATTTGGTGGCACCCAACACCAGTTTTCTTATATTAAGAATTGGAAT
GAGGTCGAGAATGGCTTTTGCTTCCATGTCACTCTCAATAAGCACAGTTTCAACTTGAACCTTTGAGGAAGAGCAGCGAGAAAGAA
ACTTTTGGAGGTATTCGCTTCTCTTGCTTCTTTCTTGAATCAGGTATCTTTCCTTCTGTTCCGGGTTTGCTTGATTTATTGGTAAC
CTTCCCAGAGGAGTTGGAATGAAGCGGATCTCTGGGAAGACGTGAACCAAATAAACCATAGTAGATTCATGCAGCATCCTCTTACC
AAGCGTCCAAAGTAGCGCATCCATACTTGCAGAAAACAGTTCCTCGGTCCCTTTCCATGTCACAACGTACACAACGTCGCTCACTT
TCCCGTAAGGAAACATATCACCACTCATACCACTCTCGTATTCTTCTATAATGGATGGAAGTGACTTGCTTCCCTTATAGACACCA
TCATCATCATCATCGTTATAATCATCGTCCTCTTCTTCGACTATCTCATGATGACTCCAGCTATTATTGCCGCTGTTGATCCTATA
ACTGTCGTAGTTGATTATATTGATCGGAGGTGGAGCTTCGTCGTTGAAAACTATGTTTTTTTCATCAGCCATGTTGATGATGCCTT
TGTTGGATAAAATTTATTGGCACAAATGAGTTGTGAGAACCAAACTATATATTGTTTCGTCGACAGCAACAAGCCTTGAAATGTTC
CAGCAATATACTAATATCCTTAACCTAATAGAAAACAATAATCTAATTAATAAAATGTCTACTAAAAAC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002269050 PREDICTED: U-box domain-containing protein 33 [Vitis vinifera]4996e-048
CBI23514 unnamed protein product [Vitis vinifera]4996e-048
XP_002530423 ATP binding protein, putative [Ricinus communis]4862e-046
XP_002308753 predicted protein [Populus trichocarpa]4825e-046
XP_003546205 PREDICTED: U-box domain-containing protein 35-like [Glycine max]4503e-042

Swiss-Prot top hits (Blast detail)Scoree value
Q9SW11 U-box domain-containing protein 351372e-007
Q9FKG6 U-box domain-containing protein 521301e-006

TrEMBL top hits (Blast detail)Scoree value
F6H8A2 Putative uncharacterized protein4996e-048
B9SWQ4 ATP binding protein, putative4862e-046
B9HC19 Predicted protein4826e-046
I1MFT3 Uncharacterized protein4503e-042
I1L048 Uncharacterized protein4441e-041

Arabidopsis top hits (Blast detail)Scoree value
AT5G47740.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: protein kinase family protein / U-box domain-containing protein (TAIR:AT2G45910.1); Has 196 Blast hits to 194 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 196; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4078e-040
AT5G65500.1 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ ubiquitin-protein ligase1603e-011
AT4G25160.1 protein kinase family protein1372e-008
AT5G61550.1 protein kinase family protein1301e-007
AT2G45910.1 protein kinase family protein / U-box domain-containing protein1229e-007