Chrysanthenum transcriptome database

Information for unigene UN58992

FASTA Sequence

Unigene ID: UN58992	Length: 2519	SSR
GTTCAACATGTGATATTTAAGACGATTACAAGAAACTGGTGTTATCAATTGTTGGAATGACAGGAATTGAAGCACGGATGGTTGAG AGCCAGATACCTAAGAGACAATTGTTTGATGATGGTTCGTGTGATATAACAGAAATACTAGCACACTATTTTGATTGAAAGAATTA GCTCGGGGCGACCAGTTCCATAGGGAGTAAAAAGAATCAGCATAAAATGCTGAAAGTAAAAACAGTTGACAACCCTATATGATTAA CAGTTAAAATCTTTCATCATTTTCCCAATCAGAATCCTCATCCTCGTCGTCATCTTCATCATCTTCAATATCATCGTCGGAATTCA TCCATGAACTTTCATCTTCCCCATTTTCTGCTTTCATTTGCTTTATGGTGTTCTCCAACTCAGATACATGTTCCGTGAGAGCCTCG TATCTCTGCAAGGCCTTCCAACGTTTCAATGCCCTAGCTTTAGATGGAAGGCTTCTAGGCCTAATACTAATTGGCCTCTGATAATT CTTTCCACGATAATACATGATGGCATAACCTTTAGGAACTTTTACAATGTCTATCAATATTCCGCCACTTTCATACTCCAAAAACC TTGCTGTCTCTTCCACAAATTCAATATCTTTTTGCTTTGATATAAGTTTTACAAGTTCTCTATGTTTCCAGTGCAAATGCATGTTC TCAATAACACCATCAAATACACCACGAATACCAAGTGGTAAGTAGGGTTTCATTCTTAAACCAAGTCTTCTGAACATAACACGTTC CTCATCCGTAATTGTTTCCTGGTCTTCAGGAGCACCAGCAGGAAGCCAAGATTCTCGTATCTTAGCTAATTCTTTATCTGCTTTAC TCCTTTTAGACTGGGCGATAAATAATTTGTGCTCAAGTTTCTTAACAACTCTAGTTACTTTTGTTTTCGATGCTTCTTTTAACATC ATCTCGTGTTCTTCACTTGTTTTTTCTCGTCCCCATTGTGCTTGAGCCTCATAAAATTCGGCCAGACTTCCTGCAAGTGCCACCTG TCCATTCTCAACACTTGCAGCAGCTGGTTCTACTACTCCATACCGGACCTTCTCTTCTGCATCTTGTATATCTTTTGTCATCTCTT GTCTTTCTGCTACTACTCCATTTCGCGCCTTCTCTTCTGCATCTTGCATCTCTTTTGTCATCTCTTGTCTTTCTACTAACGCAGTA GCTACACTGGTAGGAACGAAATCTTTCCCACGGTATATCACGATGTAATATTTGTTTCTCAGAAGTAGGACACCTCCTGTTAGTTT CTTCAATTCCTCGGCCATTAACTCATTATTGGTATTTTGTATTCCACGTTTCACAGCAATTTTAGCAACCATGCTTTTCTCCCAAA GTTTGATTATTGCAGCTGCCAAGCCCTGATGATTCCTGTTTCGCCCAAGAGCAAAATGACAAGGAAGCGATTTAGCAAGTTTTCTC AAATTTGTCATCTCGGCATTGGTCAACCGAGACCTCATTCCAGTAGGAAGAAGCCTAAAGGGAGTTTTAAAGCCGGGAACTGTTTG AGGAAGTAAATCAGCATCTATTGGAAGTATTCCTGTGCCCCACCATTCATGAAACCGTGGACCTAACCCATCCAGCACACTATTAA ACTCAGTTTCCTCTTCCGTCATGGTGCGGTCTGCAAGAACCGGTGTTCTTGTTGCAATACTAGCTGTGACAGCATCACCTGTTCTT GTTATTAGATTACTATTGGCAGAGGAAACATCCGGAACAAAAAGGGCATCACCATCTTTTTCATTGGAACGAGGTCTTGATGAAGG GCCAGCATTATTGGCTCCCCTATACACCATCATCACACTTCCTGATTGCCATATGACTAATCCACCGGTCCGGCGCTGAACAATCT CATGAGCAGTCTTCATATCACGCGCCAACACCTCGTGAAACTTCAACCTAACCAACTCAGACTTCCTCCACTGATCATGAATCTTG TCAAGCACAGCCCCCGTAATCCCCGCTTTCGGTATACTAATCCTCTCCCTTAGCGTTGTACCAACCGTCCTCAACCGTCTCAATTC ACTATCCTCTAACGTCAATTCCGCCAAAGTCGGTGCTTTCGTCCTCTTCTTCACCACTTCCCCCTTGTCTTGTTCTTGTTGAAATT CAACTTCTTTCTCCCATGGTAATACACTATCTTCCTCGTCATCGTCAATTAACATCCTATCGGGCCTAACCCAATCTCTCCTCAAC AACTCACCTAGCTTCTCATCACCTCTCATAACAAAACTTTCGCCATTTTCGCCTTCGTTTTCGTCTTCGTCGTCTGAGCCTAAACC TAAGTTACGCAGCCGGAGAACAATCCGGTCAATAGCCGTAGTTTTGGTAAAACTCGTGGTACTAGAATCAGGTGAGCGTTGTTTGA AACTAGGGTTAGGGTTAGGTGGTGCAGAAGATGATGAGGTGTTGGTTGTTGAATGTAATGGTTTGGTAAAAGAGTGTTGTTTAAGA TATGATGATGATGATGATGATGATG

Annotation (GO annotation)

GenBank top hits (Blast detail)	Score	e value
CAN72582 hypothetical protein VITISV_035294 [Vitis vinifera]	1348	5e-146
XP_002532154 conserved hypothetical protein [Ricinus communis]	1306	4e-141
XP_003530015 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Glycine max]	1277	9e-138
XP_003533366 PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Glycine max]	1274	2e-137
NP_188468 CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]	1158	6e-124

Swiss-Prot top hits (Blast detail)	Score	e value
Q6YYA3 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic	678	9e-070
Q9FYT6 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic	534	4e-053
Q9LF10 Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic	487	1e-047
Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic	246	1e-019

TrEMBL top hits (Blast detail)	Score	e value
D7SIZ8 Putative uncharacterized protein	1350	3e-146
A5BQ84 Putative uncharacterized protein	1348	6e-146
B9T1N5 Putative uncharacterized protein	1306	4e-141
I1KIX7 Uncharacterized protein	1277	1e-137
I1L4C3 Uncharacterized protein (Fragment)	1274	2e-137

Arabidopsis top hits (Blast detail)	Score	e value
AT3G18390.1 EMB1865 (embryo defective 1865); RNA binding	1271	1e-139
AT3G23070.1 RNA binding	1199	3e-131
AT4G14510.1 RNA binding	683	2e-071
AT3G01370.1 ATCFM2 (CRM FAMILY MEMBER 2); RNA binding	533	5e-054
AT4G29750.1 RNA binding	502	2e-050