Chrysanthenum transcriptome database

Information for unigene UN54622

FASTA Sequence
Unigene ID: UN54622Length: 1106 SSR
GAATGAAACAACCTTTAGAAGTTTGCAATTGAATTATATACAATTTATGGAAGGTATAAGCGGGATGGAAAAACAAGCAATACAAA
GATAGCCGATCCTTTACATGCACCTATATACTAAAATCAATGGTAAAAACATATTGTTTTGTTAGTCGGTGCTGCTTGTCTTTATC
ATCTTTTCCGCCACTCCATAACTCAGGAGATCTTCTCCATACTTTCAACATCTTACTGCAGCAATAGCTGCTCTTCGTCTGTCTGC
AATTCACTCAACCGTTTCTTTGCATAAACCGTGACCACCACTGTGGTCGCAACAGTTAGAAGAAATCCAAAAACAGTACAAATTAT
CTGAGGGGCTGAAAGTGACTGTTGATCATTTGACGCATCTGCTAATGTTCGGATCATTATACCCGTGTAAATAGCAACGAAGATCT
CAGGCACCATTCCTACGATTGTTCCCAACAAGTAGGGAACAAACTTAACATCAGTTGCGACAGCACAGTAATTATAGACGATATAA
GGAAAGGGTGAAATCCTCAAGAACATGACGGCTCTGAACTGATTAAAACAGCTTCCTTCACCTGCTAACTTCAAAATAGAAGCTTT
CTTCGGATACCTTTCTAACCACCCTTGAATTTTGTGGTAAAACAGGGAACCGATGAAATAAGGAAGCGAGGTGCCAATAATGCATC
CACCAATGATCAAAAGAAACCCAAAACCATAACCGAAGCTCATTCCAGCCACCCACATTGAAGGGGTAGATGGTATAAAGATCGTC
GGGAATAATGCCACTGAAGCAAATATTAAAACTGCTAACACTGGCTTGCTGAAGGTCTCAGTTTCCCAATTCAAGATAGGGATAAC
CTCCTTATTCATTAAAAAAGGACCAATCCAAAGAAAAAAACAAACACCCAAACCAGCCAAAAACACAAACACAAAAACAAGCTTAG
CCCACCACCACACTGACCACCACAAACCACCATTCACCATCGCACAACCACCACCACCACCTTCAGATTCTTTCAGAATCACATAA
TCATCATCTTTAACATGATGATCATCATCAATCTTGATCTTTATAACACTAACAACATCACCACCACCCTCTTC

Annotation (GO annotation)
GenBank top hits (Blast detail)Scoree value
XP_002509643 conserved hypothetical protein [Ricinus communis]7362e-075
XP_002303542 predicted protein [Populus trichocarpa]7291e-074
XP_003608784 TVP38/TMEM64 family membrane protein slr0305 [Medicago truncatula]7138e-073
XP_003525557 PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Glycine max]7074e-072
XP_002274997 PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis vinifera]7057e-072

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
B9RBV9 Putative uncharacterized protein7362e-075
B9GVU8 Predicted protein7291e-074
G7JK69 TVP38/TMEM64 family membrane protein slr03057139e-073
I1K0J6 Uncharacterized protein7074e-072
D7TWC7 Putative uncharacterized protein7057e-072

Arabidopsis top hits (Blast detail)Scoree value
AT4G22850.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12000.1); Has 1331 Blast hits to 1328 proteins in 349 species: Archae - 4; Bacteria - 600; Metazoa - 103; Fungi - 64; Plants - 162; Viruses - 0; Other Eukaryotes - 398 (source: NCBI BLink).6263e-065
AT1G12450.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22850.1); Has 1233 Blast hits to 1230 proteins in 347 species: Archae - 2; Bacteria - 557; Metazoa - 104; Fungi - 72; Plants - 132; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink).6192e-064
AT4G12000.1 INVOLVED IN: response to oxidative stress; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22850.1); Has 1153 Blast hits to 1150 proteins in 277 species: Archae - 2; Bacteria - 485; Metazoa - 104; Fungi - 24; Plants - 140; Viruses - 0; Other Eukaryotes - 398 (source: NCBI BLink).6139e-064
AT4G22850.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G12000.1).6083e-063
AT2G02370.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12450.1); Has 1745 Blast hits to 1745 proteins in 446 species: Archae - 2; Bacteria - 792; Metazoa - 108; Fungi - 97; Plants - 119; Viruses - 0; Other Eukaryotes - 627 (source: NCBI BLink).4732e-047