Chrysanthenum transcriptome database

GenBank blast output of UN95606


BLASTX 7.6.2

Query= UN95606 /QuerySize=279
        (278 letters)

Database: GenBank nr;
          20,571,509 sequences; 7,061,663,739 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|225426485|ref|XP_002277144.1| PREDICTED: nuclear pore complex...     76   2e-012
gi|224117732|ref|XP_002317654.1| predicted protein [Populus tric...     67   9e-010
gi|356549598|ref|XP_003543179.1| PREDICTED: nuclear pore complex...     66   2e-009
gi|356549600|ref|XP_003543180.1| PREDICTED: nuclear pore complex...     66   2e-009
gi|165905462|dbj|BAF98996.1| nucleoporin 98 [Daucus carota]             65   3e-009
gi|242073518|ref|XP_002446695.1| hypothetical protein SORBIDRAFT...     60   1e-007
gi|356542353|ref|XP_003539631.1| PREDICTED: uncharacterized prot...     59   2e-007

>gi|225426485|ref|XP_002277144.1| PREDICTED: nuclear pore complex protein
        Nup98-Nup96-like isoform 1 [Vitis vinifera]

          Length = 1013

 Score =  76 bits (186), Expect = 2e-012
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = -3

Query: 129 MFGSSTPFGQSSNSPFGSPSVFGQTNNANNNPFAAQPFGSTT 4
           MFGSS PFGQSS+SPFGS SVFGQTNNA  NPFA +PFGSTT
Sbjct:   1 MFGSSNPFGQSSSSPFGSQSVFGQTNNATTNPFAPKPFGSTT 42

>gi|224117732|ref|XP_002317654.1| predicted protein [Populus trichocarpa]

          Length = 1007

 Score =  67 bits (162), Expect = 9e-010
 Identities = 31/44 (70%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
 Frame = -3

Query: 129 MFGSSTPFGQSSNSPFGSPS-VFGQTNNANNNPFAAQPFGSTTS 1
           MFG+S PFGQSSNSPFG+    FGQT+NA+NNPFA +PFGS T+
Sbjct:   1 MFGASNPFGQSSNSPFGTTQPAFGQTSNASNNPFAPKPFGSPTT 44

>gi|356549598|ref|XP_003543179.1| PREDICTED: nuclear pore complex protein
        Nup98-Nup96-like isoform 1 [Glycine max]

          Length = 1038

 Score =  66 bits (160), Expect = 2e-009
 Identities = 31/40 (77%), Positives = 37/40 (92%), Gaps = 1/40 (2%)
 Frame = -3

Query: 126 FGSSTPFGQSSNSPFGSPSVFGQTNNANNNPFAAQPFGST 7
           FGS+ PFGQSS+SPFGS SVFGQTN+++NNPFA +PFGST
Sbjct:   2 FGSN-PFGQSSSSPFGSQSVFGQTNSSSNNPFAPKPFGST 40

>gi|356549600|ref|XP_003543180.1| PREDICTED: nuclear pore complex protein
        Nup98-Nup96-like isoform 2 [Glycine max]

          Length = 1010

 Score =  66 bits (160), Expect = 2e-009
 Identities = 31/40 (77%), Positives = 37/40 (92%), Gaps = 1/40 (2%)
 Frame = -3

Query: 126 FGSSTPFGQSSNSPFGSPSVFGQTNNANNNPFAAQPFGST 7
           FGS+ PFGQSS+SPFGS SVFGQTN+++NNPFA +PFGST
Sbjct:   2 FGSN-PFGQSSSSPFGSQSVFGQTNSSSNNPFAPKPFGST 40

>gi|165905462|dbj|BAF98996.1| nucleoporin 98 [Daucus carota]

          Length = 1005

 Score =  65 bits (157), Expect = 3e-009
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -3

Query: 129 MFGSSTPFGQSSNSPFGSPSVFGQTNNANNNPFAAQPFGSTT 4
           MFGS+ PFGQSS SPFG+ S FGQ ++ ++NPFA  PFGSTT
Sbjct:   1 MFGSTNPFGQSSTSPFGTQSTFGQASSGSSNPFAPNPFGSTT 42

>gi|242073518|ref|XP_002446695.1| hypothetical protein SORBIDRAFT_06g020700
        [Sorghum bicolor]

          Length = 943

 Score =  60 bits (144), Expect = 1e-007
 Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 5/48 (10%)
 Frame = -3

Query: 129 MFGSSTPFGQSSNSP-----FGSPSVFGQTNNANNNPFAAQPFGSTTS 1
           MFGS+ PFGQSS SP     FG+P  FGQ++ A NNPFA +PFGS T+
Sbjct:   1 MFGSTNPFGQSSTSPFGQTSFGTPQGFGQSSTAANNPFAPKPFGSPTT 48

>gi|356542353|ref|XP_003539631.1| PREDICTED: uncharacterized protein
        LOC100789177 [Glycine max]

          Length = 1007

 Score =  59 bits (142), Expect = 2e-007
 Identities = 30/40 (75%), Positives = 36/40 (90%), Gaps = 2/40 (5%)
 Frame = -3

Query: 126 FGSSTPFGQSSNSPFGSPSVFGQTNNANNNPFAAQPFGST 7
           FGS+ PFGQSS+SPFGS SVFGQT N+++NPFA +PFGST
Sbjct:   2 FGSN-PFGQSSSSPFGSQSVFGQT-NSSSNPFAPKPFGST 39

  Database: GenBank nr
    Posted date:  Thu Sep 27 19:07:00 2012
  Number of letters in database: 7,061,663,739
  Number of sequences in database:  20,571,509

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,409,124,086,829
Number of Sequences: 20571509
Number of Extensions: 2409124086829
Number of Successful Extensions: 406657363
Number of sequences better than 0.0: 0