Chrysanthenum transcriptome database

Arabidopsis blast output of UN95606


BLASTX 7.6.2

Query= UN95606 /QuerySize=279
        (278 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G10390.1 | Symbols:  | nucleoporin family prot...     57   2e-009
TAIR9_protein||AT1G10390.2 | Symbols:  | nucleoporin family prot...     57   2e-009
TAIR9_protein||AT1G59660.1 | Symbols:  | nucleoporin family prot...     55   7e-009

>TAIR9_protein||AT1G10390.1 | Symbols:  | nucleoporin family protein |
        chr1:3407265-3412045 REVERSE

          Length = 1042

 Score =  57 bits (136), Expect = 2e-009
 Identities = 31/44 (70%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
 Frame = -3

Query: 129 MFGSSTPFGQSS-NSPFGSPSVFGQTNN-ANNNPFA-AQPFGST 7
           MFGSS PFGQSS  SPFGS S+FGQT+N ++NNPFA A PFG++
Sbjct:   1 MFGSSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFGTS 44

>TAIR9_protein||AT1G10390.2 | Symbols:  | nucleoporin family protein |
        chr1:3407265-3412045 REVERSE

          Length = 1042

 Score =  57 bits (136), Expect = 2e-009
 Identities = 31/44 (70%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
 Frame = -3

Query: 129 MFGSSTPFGQSS-NSPFGSPSVFGQTNN-ANNNPFA-AQPFGST 7
           MFGSS PFGQSS  SPFGS S+FGQT+N ++NNPFA A PFG++
Sbjct:   1 MFGSSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFGTS 44

>TAIR9_protein||AT1G59660.1 | Symbols:  | nucleoporin family protein |
        chr1:21924693-21929233 FORWARD

          Length = 998

 Score =  55 bits (131), Expect = 7e-009
 Identities = 32/48 (66%), Positives = 39/48 (81%), Gaps = 6/48 (12%)
 Frame = -3

Query: 129 MFGSS--TPFGQSS-NSPFGSP--SVFGQT-NNANNNPFAAQPFGSTT 4
           MFGSS   PFGQSS +SPFG+   S+FGQT NNA+NNPFA +PFG++T
Sbjct:   1 MFGSSNNNPFGQSSISSPFGTQTHSLFGQTNNNASNNPFATKPFGTST 48

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,606,462,619
Number of Sequences: 33410
Number of Extensions: 6606462619
Number of Successful Extensions: 191193696
Number of sequences better than 0.0: 0