Arabidopsis blast output of UN87041
BLASTX 7.6.2
Query= UN87041 /QuerySize=1658
(1657 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G05100.1 | Symbols: | nucleic acid binding | ... 169 4e-042
TAIR9_protein||AT3G10770.1 | Symbols: | nucleic acid binding | ... 168 1e-041
TAIR9_protein||AT3G10770.2 | Symbols: | nucleic acid binding | ... 168 1e-041
TAIR9_protein||AT3G56680.1 | Symbols: | nucleic acid binding | ... 153 3e-037
TAIR9_protein||AT2G40960.1 | Symbols: | nucleic acid binding | ... 151 1e-036
>TAIR9_protein||AT5G05100.1 | Symbols: | nucleic acid binding |
chr5:1505461-1506940 REVERSE
Length = 325
Score = 169 bits (428), Expect = 4e-042
Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 2/167 (1%)
Frame = -3
Query: 1385 VDQFLREALQNPRERLSVLRIEQDVEKFVRDPSQQQMEFQQLPTSYLRLAAHRVAQHYSL 1206
VD FL EALQNPR RL++LR+E D++KF + P QQQ EFQ LPTSYLRL AHRVAQHY L
Sbjct: 11 VDPFLVEALQNPRHRLTILRMELDIQKFFQSPEQQQYEFQPLPTSYLRLIAHRVAQHYGL 70
Query: 1205 QSTVLLDNNLPDGSGSRIIVFKTSECRLPLIRLADIPIKLPSDDSGNSNVKVAIKQRPNR 1026
+T L + DGSG+RI+ KT E R P + L++IP+K P K+AIK RPNR
Sbjct: 71 FTTALEGGGV-DGSGNRILATKTVESRYPYVCLSEIPVKQPEIHGRPEGFKIAIKPRPNR 129
Query: 1025 RSQLVGGNSNSQRSNSLKSVEERKEEYNRARARIFSPNSSSSAKQES 885
+ G S ++ N L+SVEERKEEY++ARARIF+ SSS ++ S
Sbjct: 130 GAGGSGSGSGVEK-NLLRSVEERKEEYDKARARIFNSPSSSDSEDSS 175
>TAIR9_protein||AT3G10770.1 | Symbols: | nucleic acid binding |
chr3:3372461-3374026 REVERSE
Length = 334
Score = 168 bits (425), Expect = 1e-041
Identities = 97/198 (48%), Positives = 133/198 (67%), Gaps = 6/198 (3%)
Frame = -3
Query: 1385 VDQFLREALQNPRERLSVLRIEQDVEKFVRDPSQQQMEFQQLPTSYLRLAAHRVAQHYSL 1206
VD FL EALQNPR RL++LR+E D++KF ++P Q Q EF PTSYLRLAAHRVAQHY L
Sbjct: 11 VDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVAQHYGL 70
Query: 1205 QSTVLLDN--NLPDGSGSRIIVFKTSECRLPLIRLADIPIKLPSDDSGNSNVKVAIKQRP 1032
T+ LDN DGS +RI+V KT+E R P + L++IP+K P ++ K+AIK RP
Sbjct: 71 -VTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQP-ENGRPEGFKIAIKPRP 128
Query: 1031 NRRSQLVGGNSNSQRSNSLKSVEERKEEYNRARARIFSPNSSSSAKQESDQRIQEV-VQR 855
R S GG+ + + N L+SVEERKEEY++ARARIF+ SSS ++ S R + V+
Sbjct: 129 KRGSG-CGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPPSLEVRN 187
Query: 854 SSVGASKAEEVSSSTRVD 801
+ + ++ E +++ VD
Sbjct: 188 TCINRNETEVAVNNSPVD 205
Score = 57 bits (136), Expect = 3e-008
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Frame = -3
Query: 731 EPIGRSNSNNGRVAIFRDREVERNDPDYDRSYDRYAQRFDPGFGF-----NGGSYPVQPM 567
+ + R + RVAI RDRE +R DPDYDRSYDRY DP + + +G S+ P+
Sbjct: 205 DAVTRDSGRTSRVAIIRDREKDRYDPDYDRSYDRYV--VDPAYRYVRVMPSGQSFSPMPI 262
Query: 566 YAPVITYNTEFPQLGSAHRA 507
+ P ++ FP + H+A
Sbjct: 263 HIPF--HDGFFPHMPRGHQA 280
>TAIR9_protein||AT3G10770.2 | Symbols: | nucleic acid binding |
chr3:3372461-3374026 REVERSE
Length = 326
Score = 168 bits (425), Expect = 1e-041
Identities = 97/198 (48%), Positives = 133/198 (67%), Gaps = 6/198 (3%)
Frame = -3
Query: 1385 VDQFLREALQNPRERLSVLRIEQDVEKFVRDPSQQQMEFQQLPTSYLRLAAHRVAQHYSL 1206
VD FL EALQNPR RL++LR+E D++KF ++P Q Q EF PTSYLRLAAHRVAQHY L
Sbjct: 11 VDPFLVEALQNPRHRLTILRMELDIQKFFQNPEQLQFEFPPFPTSYLRLAAHRVAQHYGL 70
Query: 1205 QSTVLLDN--NLPDGSGSRIIVFKTSECRLPLIRLADIPIKLPSDDSGNSNVKVAIKQRP 1032
T+ LDN DGS +RI+V KT+E R P + L++IP+K P ++ K+AIK RP
Sbjct: 71 -VTMALDNGTGAGDGSDNRILVTKTAESRFPYVCLSEIPVKQP-ENGRPEGFKIAIKPRP 128
Query: 1031 NRRSQLVGGNSNSQRSNSLKSVEERKEEYNRARARIFSPNSSSSAKQESDQRIQEV-VQR 855
R S GG+ + + N L+SVEERKEEY++ARARIF+ SSS ++ S R + V+
Sbjct: 129 KRGSG-CGGSGSGVQQNLLRSVEERKEEYDKARARIFNSPSSSDSEDSSSLRPPSLEVRN 187
Query: 854 SSVGASKAEEVSSSTRVD 801
+ + ++ E +++ VD
Sbjct: 188 TCINRNETEVAVNNSPVD 205
Score = 55 bits (130), Expect = 2e-007
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Frame = -3
Query: 731 EPIGRSNSNNGRVAIFRDREVERNDPDYDRSYDRYAQRFDPGFGFNGGSYPVQPMYAPVI 552
+ + R + RVAI RDRE +R DPDYDRSYDRY + G F+ PM +
Sbjct: 205 DAVTRDSGRTSRVAIIRDREKDRYDPDYDRSYDRYVRVMPSGQSFS-------PMPIHIP 257
Query: 551 TYNTEFPQLGSAHRA 507
++ FP + H+A
Sbjct: 258 FHDGFFPHMPRGHQA 272
>TAIR9_protein||AT3G56680.1 | Symbols: | nucleic acid binding |
chr3:20991537-20993446 FORWARD
Length = 354
Score = 153 bits (386), Expect = 3e-037
Identities = 87/197 (44%), Positives = 128/197 (64%), Gaps = 5/197 (2%)
Frame = -3
Query: 1388 SVDQFLREALQNPRERLSVLRIEQDVEKFVRDPSQQQMEFQQLPTSYLRLAAHRVAQHYS 1209
+VD FL EAL N R RL++LR+E DV++ +++P QQQ EFQ PTSYLRLAAHRVA HY
Sbjct: 23 NVDPFLVEALHNSRHRLTILRMELDVQRLLQNPEQQQFEFQHFPTSYLRLAAHRVANHYG 82
Query: 1208 LQSTVLLDNNLPDGSGSRIIVFKTSECRLPLIRLADIPIKLPSDDSGNSNVKVAIKQRPN 1029
L + V + DG+ +RI+V KT+E + P +RL++IP+ S++ + KV+IK RP+
Sbjct: 83 LATAV--QESGADGNENRILVTKTTESKFPAVRLSEIPVAKQSENGKFESRKVSIKTRPS 140
Query: 1028 RRSQLVGGNSNSQRSNSLKSVEERKEEYNRARARIFSPNSSSSAKQESDQRIQEVVQRSS 849
+ S G+ R L+SVEERKEEY++AR RIFS + S S + +V +R++
Sbjct: 141 KGSGYGAGDLEKNR-GPLRSVEERKEEYDKARERIFSGLTGLSCDDSSSE--TQVYERNA 197
Query: 848 VGASKAEEVSSSTRVDV 798
+ ++VS + V+V
Sbjct: 198 SLSRDDKQVSKNAYVEV 214
>TAIR9_protein||AT2G40960.1 | Symbols: | nucleic acid binding |
chr2:17095637-17097368 FORWARD
Length = 352
Score = 151 bits (381), Expect = 1e-036
Identities = 83/157 (52%), Positives = 111/157 (70%), Gaps = 6/157 (3%)
Frame = -3
Query: 1388 SVDQFLREALQNPRERLSVLRIEQDVEKFVRDPSQQQMEFQQLPTSYLRLAAHRVAQHYS 1209
+VD FL EALQNPR RL++LR+E DV++F++ P QQQ EFQ PTSYLR AAHRVA HY
Sbjct: 20 NVDPFLVEALQNPRHRLTILRMELDVQRFLQSPDQQQFEFQHFPTSYLRFAAHRVANHYG 79
Query: 1208 LQSTVLLDNNLPDGSGSRIIVFKTSECRLPLIRLADIPIKLPSDDSGNSNVKVAIKQRPN 1029
L ++V + DG+ SRI+V K+S+ R P RL++IP+K S+ ++KV IK RP
Sbjct: 80 LITSV--RDGGADGNESRIVVTKSSDSRFPAARLSEIPVK-QSETGKFEHMKVVIKPRPT 136
Query: 1028 RRSQLVGGNSNSQRSNSLKSVEERKEEYNRARARIFS 918
+ S + G + + LKSVEERKE+Y+RARARIF+
Sbjct: 137 KGSGMEG---DELKGGLLKSVEERKEDYDRARARIFN 170
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,823,277,976
Number of Sequences: 33410
Number of Extensions: 17823277976
Number of Successful Extensions: 783277665
Number of sequences better than 0.0: 0
|