SwissProt blast output of UN86516
BLASTX 7.6.2
Query= UN86516 /QuerySize=229
(228 letters)
Database: Uniprot/SwissProt;
537,505 sequences; 190,795,139 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania maj... 95 1e-019
sp|Q94C69|CSP3_ARATH Cold shock domain-containing protein 3 OS=A... 60 2e-009
sp|O65639|CSP1_ARATH Cold shock protein 1 OS=Arabidopsis thalian... 58 1e-008
sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homol... 55 1e-007
sp|Q38896|CSP4_ARATH Cold shock domain-containing protein 4 OS=A... 51 2e-006
>sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania major GN=HEXBP
PE=4 SV=1
Length = 271
Score = 95 bits (234), Expect = 1e-019
Identities = 39/62 (62%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Frame = -1
Query: 219 HMSRECPQGGG---GGGDRSCYKCGESGHMSRECPQXXXXXXXXRSCYKCGESGHMSREC 49
H+SR+CP G G G GDR CYKCGESGHMSRECP R+CYKCG+ GH+SREC
Sbjct: 178 HISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSTGSGDRACYKCGKPGHISREC 237
Query: 48 PQ 43
P+
Sbjct: 238 PE 239
Score = 90 bits (222), Expect = 3e-018
Identities = 39/63 (61%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Frame = -1
Query: 219 HMSRECPQGGG---GGGDRSCYKCGESGHMSRECP--QXXXXXXXXRSCYKCGESGHMSR 55
H+SR+CP G G G GDR+CYKCG++GH+SR+CP Q R CYKCGESGHMSR
Sbjct: 150 HISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSR 209
Query: 54 ECP 46
ECP
Sbjct: 210 ECP 212
Score = 80 bits (196), Expect = 3e-015
Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 6/61 (9%)
Frame = -1
Query: 210 RECPQGGG-GGGDRSCYKCGESGHMSRECPQXXXXXXXX-----RSCYKCGESGHMSREC 49
RECP G G GDR+CYKCG+ GH+SRECP+ R+CYKCGE+GH+SR+C
Sbjct: 209 RECPSAGSTGSGDRACYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268
Query: 48 P 46
P
Sbjct: 269 P 269
Score = 79 bits (193), Expect = 7e-015
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Frame = -1
Query: 222 GHMSRECPQGGGGGGDRS--CYKCGESGHMSRECP-QXXXXXXXXRSCYKCGESGHMSRE 52
GH +RECP+ G +RS C++CGE GHMSRECP + +C++CGE+GHMSR+
Sbjct: 25 GHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMTCFRCGEAGHMSRD 84
Query: 51 CP 46
CP
Sbjct: 85 CP 86
Score = 77 bits (187), Expect = 3e-014
Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Frame = -1
Query: 222 GHMSRECPQ--GGGGGGDRSCYKCGESGHMSRECPQXXX-XXXXXRSCYKCGESGHMSRE 52
GHMSRECP G G +C++CGE+GHMSR+CP CYKCG+ GH+SR+
Sbjct: 52 GHMSRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRD 111
Query: 51 CP 46
CP
Sbjct: 112 CP 113
Score = 74 bits (181), Expect = 2e-013
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = -1
Query: 192 GGGGGDRSCYKCGESGHMSRECP--QXXXXXXXXRSCYKCGESGHMSRECP 46
GG GDR+CYKCG++GH+SR+CP Q R+CYKCG++GH+SR+CP
Sbjct: 134 GGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCP 184
Score = 57 bits (137), Expect = 2e-008
Identities = 23/35 (65%), Positives = 28/35 (80%), Gaps = 6/35 (17%)
Frame = -1
Query: 210 RECPQGGG------GGGDRSCYKCGESGHMSRECP 124
RECP+ GG GGGDR+CYKCGE+GH+SR+CP
Sbjct: 235 RECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCP 269
Score = 57 bits (135), Expect = 4e-008
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = -1
Query: 171 SCYKCGESGHMSRECPQX-XXXXXXXRSCYKCGESGHMSRECP 46
SC CG+ GH +RECP+ +C++CGE GHMSRECP
Sbjct: 17 SCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECP 59
>sp|Q94C69|CSP3_ARATH Cold shock domain-containing protein 3 OS=Arabidopsis
thaliana GN=CSP3 PE=2 SV=1
Length = 301
Score = 60 bits (145), Expect = 2e-009
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 9/65 (13%)
Frame = -1
Query: 219 HMSREC----PQGGGGGGDRSCYKCGESGHMSRECPQXXXXXX----XXRSCYKCGESGH 64
H+++ C P GGGGGG R+CY+CG +GH++R+C + C+ CG+ GH
Sbjct: 234 HIAKVCTSKIPSGGGGGG-RACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGH 292
Query: 63 MSREC 49
+REC
Sbjct: 293 FAREC 297
>sp|O65639|CSP1_ARATH Cold shock protein 1 OS=Arabidopsis thaliana GN=CSP1 PE=2
SV=1
Length = 299
Score = 58 bits (139), Expect = 1e-008
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = -1
Query: 189 GGGGDRSCYKCGESGHMSRECPQXXXXXXXXRSCYKCGESGHMSRECPQ 43
GGGG +CY CG GH++R+C R CY+CG SGH++R+C Q
Sbjct: 225 GGGGSGTCYSCGGVGHIARDC---ATKRQPSRGCYQCGGSGHLARDCDQ 270
Score = 53 bits (126), Expect = 4e-007
Identities = 20/34 (58%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
Frame = -1
Query: 222 GHMSRECPQ--GGGGGGDRSCYKCGESGHMSREC 127
GH++R+C Q GGGG D +CYKCG+ GH +REC
Sbjct: 262 GHLARDCDQRGSGGGGNDNACYKCGKEGHFAREC 295
>sp|P36627|BYR3_SCHPO Cellular nucleic acid-binding protein homolog
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=byr3 PE=2
SV=1
Length = 179
Score = 55 bits (130), Expect = 1e-007
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Frame = -1
Query: 225 SGHMSRECPQGGGGGGDRSCYKCGESGHMSREC----PQXXXXXXXXRS---CYKCGESG 67
+GH+ R+CP CYKCG GH++R+C Q RS CY CG G
Sbjct: 66 AGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYG 125
Query: 66 HMSREC 49
H +R+C
Sbjct: 126 HQARDC 131
>sp|Q38896|CSP4_ARATH Cold shock domain-containing protein 4 OS=Arabidopsis
thaliana GN=CSP4 PE=1 SV=1
Length = 201
Score = 51 bits (120), Expect = 2e-006
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = -1
Query: 222 GHMSRECPQGGGGGGDRSCYKCGESGHMSRECPQ 121
G+ R GGGGGD SC+KCGE GHM+REC Q
Sbjct: 120 GYGGRGSGGRGGGGGDNSCFKCGEPGHMARECSQ 153
Database: Uniprot/SwissProt
Posted date: Thu Sep 27 17:53:50 2012
Number of letters in database: 190,795,139
Number of sequences in database: 537,505
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153,672,307,831
Number of Sequences: 537505
Number of Extensions: 153672307831
Number of Successful Extensions: 912197726
Number of sequences better than 0.0: 0
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