SwissProt blast output of UN84842
BLASTX 7.6.2
Query= UN84842 /QuerySize=2678
(2677 letters)
Database: Uniprot/SwissProt;
537,505 sequences; 190,795,139 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LA... 220 6e-056
sp|Q6ZQ58|LARP1_MOUSE La-related protein 1 OS=Mus musculus GN=La... 218 2e-055
sp|Q659C4|LAR1B_HUMAN La-related protein 1B OS=Homo sapiens GN=L... 205 3e-051
sp|Q9VAW5|LARP_DROME La-related protein OS=Drosophila melanogast... 203 1e-050
sp|Q9P6K0|YLA3_SCHPO Uncharacterized HTH La-type RNA-binding pro... 70 1e-010
sp|P10881|LA_BOVIN Lupus La protein homolog OS=Bos taurus GN=SSB... 62 2e-008
sp|P05455|LA_HUMAN Lupus La protein OS=Homo sapiens GN=SSB PE=1 ... 62 2e-008
sp|Q9I7T7|Y1505_DROME La-related protein CG11505 OS=Drosophila m... 60 6e-008
sp|Q6A0A2|LAR4B_MOUSE La-related protein 4B OS=Mus musculus GN=L... 59 2e-007
sp|Q71RC2|LARP4_HUMAN La-related protein 4 OS=Homo sapiens GN=LA... 59 2e-007
sp|Q92615|LAR4B_HUMAN La-related protein 4B OS=Homo sapiens GN=L... 59 2e-007
sp|Q8BWW4|LARP4_MOUSE La-related protein 4 OS=Mus musculus GN=La... 58 3e-007
sp|Q26457|LA_AEDAL La protein homolog OS=Aedes albopictus PE=1 SV=1 57 9e-007
>sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2
Length = 1096
Score = 220 bits (559), Expect = 6e-056
Identities = 109/190 (57%), Positives = 137/190 (72%), Gaps = 4/190 (2%)
Frame = -1
Query: 847 HGLRSSKLGASPHSGF-TVGSPPVGSMPKPFPPFQHPSHQLLEENGFRQQKYVKYHKRCL 671
H R++ + +SP G TVGS G P+ P FQHPSH+LL+ENGF Q Y KY +RCL
Sbjct: 841 HRPRTASISSSPSEGTPTVGS--YGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCL 898
Query: 670 NERKKCGIGCSEEMNTLYRFWSYFLRDLFVPSMYNEFKKIALEDATAGYNYGMECLFRFY 491
NERK+ GIG S+EMNTL+RFWS+FLRD F MY EFK++ALEDA GY YG+ECLFR+Y
Sbjct: 899 NERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYY 958
Query: 490 SYGLEKEFRDDVYGDFEQLTLDFYNKGDLYGLEKYWAFHHYSKTKNHKKLPELDRLLKED 311
SYGLEK+FR D++ DF++ T+ Y G LYGLEK+WAF YSK KN P+L L +
Sbjct: 959 SYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYLGK- 1017
Query: 310 YRSLNDFKVN 281
+R L DF+V+
Sbjct: 1018 FRRLEDFRVD 1027
Score = 69 bits (166), Expect = 2e-010
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = -1
Query: 1795 QALKASLRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMSTDIPFIVDA 1616
+ LK ++ QIEYYFS NL D +L MD G++ I+ IA F RV+ ++TDI I A
Sbjct: 401 ELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAA 460
Query: 1615 LLSSSTLEVQGDKVRKREGWSKW 1547
L S +E+ +KVR+RE KW
Sbjct: 461 LKDSKVVEIVDEKVRRREEPEKW 483
>sp|Q6ZQ58|LARP1_MOUSE La-related protein 1 OS=Mus musculus GN=Larp1 PE=1 SV=2
Length = 1072
Score = 218 bits (555), Expect = 2e-055
Identities = 108/192 (56%), Positives = 138/192 (71%), Gaps = 8/192 (4%)
Frame = -1
Query: 847 HGLRSSKLGASPHSGFTVGSPPVGS---MPKPFPPFQHPSHQLLEENGFRQQKYVKYHKR 677
H R++ + +SP + G+P VGS P+ P FQHPSH+LL+ENGF Q Y KY +R
Sbjct: 818 HRPRTASISSSP----SEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRR 873
Query: 676 CLNERKKCGIGCSEEMNTLYRFWSYFLRDLFVPSMYNEFKKIALEDATAGYNYGMECLFR 497
CLNERK+ GIG S+EMNTL+RFWS+FLRD F MY EFK++ALEDA GY YG+ECLFR
Sbjct: 874 CLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFR 933
Query: 496 FYSYGLEKEFRDDVYGDFEQLTLDFYNKGDLYGLEKYWAFHHYSKTKNHKKLPELDRLLK 317
+YSYGLEK+FR D++ DF++ T+ Y G LYGLEK+WAF YSK KN P+L L
Sbjct: 934 YYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYLG 993
Query: 316 EDYRSLNDFKVN 281
+ +R L DF+V+
Sbjct: 994 K-FRRLEDFRVD 1004
Score = 67 bits (163), Expect = 5e-010
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = -1
Query: 1795 QALKASLRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMSTDIPFIVDA 1616
+ LK ++ QIEYYFS NL D +L MD G++ I+ IA F RV+ ++TDI I A
Sbjct: 376 ELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAA 435
Query: 1615 LLSSSTLEVQGDKVRKREGWSKW 1547
L S +E+ +KVR+RE KW
Sbjct: 436 LKDSKVVEMVEEKVRRREEPEKW 458
>sp|Q659C4|LAR1B_HUMAN La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1
SV=2
Length = 914
Score = 205 bits (519), Expect = 3e-051
Identities = 99/184 (53%), Positives = 127/184 (69%), Gaps = 2/184 (1%)
Frame = -1
Query: 832 SKLGASPHSGFTVGSPPVGSMPKPFPPFQHPSHQLLEENGFRQQKYVKYHKRCLNERKKC 653
S ASP G + G P FP FQHPSH+LL+ENGF QQ Y KY +RCL+ERK+
Sbjct: 668 STSNASPSEGAPLAG-SYGCTPHSFPKFQHPSHELLKENGFTQQVYHKYRRRCLSERKRL 726
Query: 652 GIGCSEEMNTLYRFWSYFLRDLFVPSMYNEFKKIALEDATAGYNYGMECLFRFYSYGLEK 473
GIG S+EMNTL+RFWS+FLRD F MY EF+++A EDA Y YG+ECLFRFYSYGLEK
Sbjct: 727 GIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGLECLFRFYSYGLEK 786
Query: 472 EFRDDVYGDFEQLTLDFYNKGDLYGLEKYWAFHHYSKTKNHKKLPELDRLLKEDYRSLND 293
+FR +++ DF++ T Y G LYGLEK+WA+ YS++K P+L L ++ L D
Sbjct: 787 KFRREIFQDFQEETKKDYESGQLYGLEKFWAYLKYSQSKTQSIDPKLQEYLC-SFKRLED 845
Query: 292 FKVN 281
F+V+
Sbjct: 846 FRVD 849
Score = 76 bits (185), Expect = 1e-012
Identities = 37/94 (39%), Positives = 61/94 (64%)
Frame = -1
Query: 1828 GAGIPMLPAQAQALKASLRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKR 1649
G G+ + P + LK ++ QIEYYFS +NL D +L MD+ G++ IS IA F+RV+
Sbjct: 202 GTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQA 261
Query: 1648 MSTDIPFIVDALLSSSTLEVQGDKVRKREGWSKW 1547
++T++ I++AL S+ +E+ +K+RK+ KW
Sbjct: 262 LTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKW 295
>sp|Q9VAW5|LARP_DROME La-related protein OS=Drosophila melanogaster GN=larp PE=1
SV=5
Length = 1673
Score = 203 bits (514), Expect = 1e-050
Identities = 103/193 (53%), Positives = 134/193 (69%), Gaps = 8/193 (4%)
Frame = -1
Query: 847 HGLRSSKLGASPHSGFTVGSPPV--GSMPKPFPPFQHPSHQLLEENGFRQQKYVKYHKRC 674
H R++ +G+S + T S S+P+ P FQHPSH LL+EN F QQ Y KYH RC
Sbjct: 1295 HRPRTTSMGSSAGTSPTASSYGSFGSSVPQSLPVFQHPSHALLKENNFTQQAYHKYHSRC 1354
Query: 673 LNERKKCGIGCSEEMNTLYRFWSYFLRDLFVPSMYNEFKKIALEDATAGYNYGMECLFRF 494
L ER++ G G S+EMNTLYRFWS+FLR+ F SMYNEF+ +ALEDA G+ YG+ECLFRF
Sbjct: 1355 LKERRRLGYGQSQEMNTLYRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRF 1414
Query: 493 YSYGLEKEFRDDVYGDFEQLTLDFYNKGDLYGLEKYWAFHHYSKTKNHKKL---PELDRL 323
+SYGLEK+FR ++Y DF+ T+ Y G LYGLEK+WAF Y KN +KL P+L
Sbjct: 1415 FSYGLEKKFRPNIYQDFQDETIADYETGQLYGLEKFWAFLKY--YKNGEKLEVQPKLAEY 1472
Query: 322 LKEDYRSLNDFKV 284
LK ++++ DF+V
Sbjct: 1473 LK-SFKNIEDFRV 1484
Score = 66 bits (160), Expect = 1e-009
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Frame = -1
Query: 1798 AQALKASLRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMSTDIPFIVD 1619
A ++K +++ Q+EYYFS NL D +L MD G++ ++ IA F RV ++TD+ IV+
Sbjct: 726 ANSIKEAIKKQVEYYFSVDNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVN 785
Query: 1618 ALLSSSTLEV-QGDKVRKREGWSKW----IPASVGNKSSMIEERSTKQSEEGVDIESLKK 1454
A+ S LE+ +G KVR + + W +P + I +Q E+ E L++
Sbjct: 786 AIKESDKLELFEGYKVRTKTTPTTWPITEVPEVNEGEPKAIGTLEQEQLEQNDGQEKLEE 845
Query: 1453 DT 1448
T
Sbjct: 846 QT 847
>sp|Q9P6K0|YLA3_SCHPO Uncharacterized HTH La-type RNA-binding protein C1527.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1527.03
PE=1 SV=1
Length = 475
Score = 70 bits (169), Expect = 1e-010
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Frame = -1
Query: 1789 LKASLRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMSTDIPFIVDALL 1610
++A L Q+EYYFS +NL D +L MDD G+V ++ +A F R+K STD+ + A
Sbjct: 325 VQAFLTSQLEYYFSIENLCKDMFLRKHMDDEGYVPLAFLASFNRIKSFSTDLNLLHAACK 384
Query: 1609 SSSTLEVQGD-------KVRKREGWSKWI 1544
+S ++V D KVR++E WS WI
Sbjct: 385 ASDIIDVAIDLQSPMSIKVRRKETWSPWI 413
>sp|P10881|LA_BOVIN Lupus La protein homolog OS=Bos taurus GN=SSB PE=2 SV=2
Length = 404
Score = 62 bits (149), Expect = 2e-008
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = -1
Query: 1792 ALKASLRGQIEYYFSDQNLLSDQYLISLMD-DHGWVSISTIADFKRVKRMSTDIPFIVDA 1616
AL+A + QIEYYF D NL D++L + D GWV + + F R+ R++TD IV+A
Sbjct: 12 ALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEA 71
Query: 1615 LLSSST--LEVQGDKVRKREGWSKWIPASVGNKSSMIEERS 1499
L S +E+ DK + R SK +P + ++ RS
Sbjct: 72 LSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRS 112
>sp|P05455|LA_HUMAN Lupus La protein OS=Homo sapiens GN=SSB PE=1 SV=2
Length = 408
Score = 62 bits (149), Expect = 2e-008
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Frame = -1
Query: 1792 ALKASLRGQIEYYFSDQNLLSDQYLISLMD-DHGWVSISTIADFKRVKRMSTDIPFIVDA 1616
AL+A + QIEYYF D NL D++L + D GWV + + F R+ R++TD IV+A
Sbjct: 12 ALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEA 71
Query: 1615 LLSSST--LEVQGDKVRKREGWSKWIPASVGNKSSMIEERS 1499
L S +E+ DK + R SK +P + ++ RS
Sbjct: 72 LSKSKAELMEISEDKTKIRRSPSKPLPEVTDEYKNDVKNRS 112
>sp|Q9I7T7|Y1505_DROME La-related protein CG11505 OS=Drosophila melanogaster
GN=CG11505 PE=1 SV=2
Length = 1531
Score = 60 bits (145), Expect = 6e-008
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = -1
Query: 1789 LKASLRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMSTDIPFIVDALL 1610
LK L Q+EYYFS +NL +D YL+S MD +V I T+A F V++++ DI I + L
Sbjct: 268 LKQMLATQLEYYFSRENLANDTYLLSQMDSDQYVPIYTVARFNLVRKLTNDINLITEVLR 327
Query: 1609 SSSTLEVQGDKVRKR 1565
S ++V +R R
Sbjct: 328 ESPNVQVDDKGLRVR 342
>sp|Q6A0A2|LAR4B_MOUSE La-related protein 4B OS=Mus musculus GN=Larp4b PE=1
SV=2
Length = 741
Score = 59 bits (141), Expect = 2e-007
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = -1
Query: 1807 PAQAQALKASLRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMSTDIPF 1628
P + + L+ +E+ S +NL SD YLIS MD +V I+T+A+ +K++STD+
Sbjct: 152 PESQEDPREVLKKTLEFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDL 211
Query: 1627 IVDALLSSSTLEV--QGDKVRKRE 1562
IV+ L S ++V +G+KVR +
Sbjct: 212 IVEVLRSLPLVQVDEKGEKVRPNQ 235
>sp|Q71RC2|LARP4_HUMAN La-related protein 4 OS=Homo sapiens GN=LARP4 PE=1 SV=3
Length = 724
Score = 59 bits (141), Expect = 2e-007
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Frame = -1
Query: 1789 LKASLRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMSTDIPFIVDALL 1610
LK L+ Q+E+ FS +NL D YLIS MD ++ I T+A+ + +K+++TD I++ L
Sbjct: 119 LKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLR 178
Query: 1609 SSSTLEV--QGDKVR 1571
SS ++V +G+KVR
Sbjct: 179 SSPMVQVDEKGEKVR 193
>sp|Q92615|LAR4B_HUMAN La-related protein 4B OS=Homo sapiens GN=LARP4B PE=1
SV=3
Length = 738
Score = 59 bits (140), Expect = 2e-007
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = -1
Query: 1777 LRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMSTDIPFIVDALLSSST 1598
L+ +E+ S +NL SD YLIS MD +V I+T+A+ +K++STD+ IV+ L S
Sbjct: 160 LKKTLEFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPL 219
Query: 1597 LEV--QGDKVRKRE 1562
++V +G+KVR +
Sbjct: 220 VQVDEKGEKVRPNQ 233
>sp|Q8BWW4|LARP4_MOUSE La-related protein 4 OS=Mus musculus GN=Larp4 PE=1 SV=2
Length = 719
Score = 58 bits (139), Expect = 3e-007
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Frame = -1
Query: 1789 LKASLRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMSTDIPFIVDALL 1610
LK L+ Q+E+ FS +NL D YLIS MD +V I T+A+ + +K+++T+ I++ L
Sbjct: 115 LKECLKKQLEFCFSRENLSKDLYLISQMDSDQFVPIWTVANMEEIKKLTTNTDLILEVLR 174
Query: 1609 SSSTLEV--QGDKVR 1571
SS ++V +G+KVR
Sbjct: 175 SSPMVQVDEKGEKVR 189
>sp|Q26457|LA_AEDAL La protein homolog OS=Aedes albopictus PE=1 SV=1
Length = 383
Score = 57 bits (135), Expect = 9e-007
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = -1
Query: 1789 LKASLRGQIEYYFSDQNLLSDQYL-ISLMDDHGWVSISTIADFKRVKRMSTDIPFIVDAL 1613
L+AS Q+EYYF D NL D++L + D GWV + + FKR+K +S D IVDA+
Sbjct: 43 LEASTIRQLEYYFGDANLARDKFLQEQISKDEGWVPVDVLLTFKRLKSLSEDKKVIVDAI 102
Query: 1612 LSS--STLEVQGDKVRKREGWSKWIP 1541
S +EV D+ + R + +P
Sbjct: 103 EKSDEGLIEVSEDREKLRRHPERPLP 128
Database: Uniprot/SwissProt
Posted date: Thu Sep 27 17:53:50 2012
Number of letters in database: 190,795,139
Number of sequences in database: 537,505
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,426,012,862
Number of Sequences: 537505
Number of Extensions: 148426012862
Number of Successful Extensions: 886724388
Number of sequences better than 0.0: 0
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