Arabidopsis blast output of UN84842
BLASTX 7.6.2
Query= UN84842 /QuerySize=2678
(2677 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G21160.1 | Symbols: | La domain-containing pr... 324 3e-088
TAIR9_protein||AT4G35890.1 | Symbols: | La domain-containing pr... 82 1e-015
TAIR9_protein||AT5G66100.1 | Symbols: | La domain-containing pr... 74 3e-013
TAIR9_protein||AT5G46250.1 | Symbols: | RNA recognition motif (... 59 1e-008
TAIR9_protein||AT5G46250.2 | Symbols: | RNA recognition motif (... 59 1e-008
TAIR9_protein||AT5G46250.3 | Symbols: | RNA recognition motif (... 59 1e-008
>TAIR9_protein||AT5G21160.1 | Symbols: | La domain-containing protein /
proline-rich family protein | chr5:7199191-7203879 REVERSE
Length = 827
Score = 324 bits (828), Expect = 3e-088
Identities = 156/255 (61%), Positives = 187/255 (73%), Gaps = 2/255 (0%)
Frame = -1
Query: 1015 GSPNSRRKQNKGFFKQQSLKNQRLFSSNLKNNXXXXXXXXXXXXXXXXXXTPPDNNHGLR 836
G SRRKQNKG K + +R FSSN++NN TPPD +HG R
Sbjct: 570 GIITSRRKQNKGTHKHHTAHARRFFSSNIRNNGNISESPPSSSIGFFFGSTPPD-SHGPR 628
Query: 835 SSKLGASPHSGFTVGSPPVGSMPKPFPPFQHPSHQLLEENGFRQQKYVKYHKRCLNERKK 656
SKL +SP + SPPVGS+PK FPPFQHPSHQLLEENGF+Q+KY+KY KRCLNERKK
Sbjct: 629 LSKLSSSPQCTLSGSSPPVGSLPKSFPPFQHPSHQLLEENGFKQEKYLKYRKRCLNERKK 688
Query: 655 CGIGCSEEMNTLYRFWSYFLRDLFVPSMYNEFKKIALEDATAGYNYGMECLFRFYSYGLE 476
G GCSEEMN LYRFWSYFLRD FV SMY++F+K ALEDA Y+YG+ECLFRFYSYGLE
Sbjct: 689 LGSGCSEEMNHLYRFWSYFLRDTFVLSMYDDFQKFALEDAAGNYDYGLECLFRFYSYGLE 748
Query: 475 KEFRDDVYGDFEQLTLDFYNKGDLYGLEKYWAFHHY-SKTKNHKKLPELDRLLKEDYRSL 299
K F +D+Y DFE+L+LDFY+KG+LYGLEKYWAFHHY K + K PEL++LLKE++RS+
Sbjct: 749 KHFDEDLYKDFEKLSLDFYHKGNLYGLEKYWAFHHYRGKEEPITKHPELEKLLKEEFRSI 808
Query: 298 NDFKVNRGKTKAKND 254
+DF+ T K +
Sbjct: 809 DDFRAKETITNQKEN 823
Score = 112 bits (278), Expect = 2e-024
Identities = 57/116 (49%), Positives = 77/116 (66%)
Frame = -1
Query: 1822 GIPMLPAQAQALKASLRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMS 1643
G P+L + L+ + Q+EYYFSD+NL +D YLISLMD+ GWV IA FKRVK M+
Sbjct: 267 GPPILSPEKLDLRDRVLKQVEYYFSDENLENDHYLISLMDEEGWVPTKIIAGFKRVKAMT 326
Query: 1642 TDIPFIVDALLSSSTLEVQGDKVRKREGWSKWIPASVGNKSSMIEERSTKQSEEGV 1475
D+ FIV AL S+++EVQGD++RKR+ WS WIPAS + S+ K S + +
Sbjct: 327 MDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWIPASKKSTSAETIGDGDKDSPKSI 382
Score = 84 bits (206), Expect = 4e-016
Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Frame = -1
Query: 1501 STKQSEEGVDIESLKKDTSHEDHSNTENKSKFSKQDIDKVCDDFGSTFMFDXXXXXXH-- 1328
S+K + E + ++ S S K++++ + +DF +TF+ D H
Sbjct: 395 SSKPTVSDFSSEGAQSSRTNNYKSGNLKSSADEKRNVEDLSNDFSNTFLLDEELDLEHRS 454
Query: 1327 -KKDDISSKTRXXXXXXXXXXNDQAVERLVIVTQNNRSGRGTK-GSVEETKFSNELASAI 1154
+K +S +DQ +++LVIVTQN+ G G E ELAS I
Sbjct: 455 PRKSGLSMSKSIEYEDDDMAVDDQDIQKLVIVTQNSGKSDGAGIGGTEAKNIPKELASTI 514
Query: 1153 NDGLYYYEQELKSKRNKGRRNNPTTEIKDVTSKS 1052
NDGLYY+EQELK KR+ R+NN + KD KS
Sbjct: 515 NDGLYYFEQELKKKRSGRRKNNSHLDTKDGKIKS 548
>TAIR9_protein||AT4G35890.1 | Symbols: | La domain-containing protein |
chr4:16997433-17000410 FORWARD
Length = 524
Score = 82 bits (202), Expect = 1e-015
Identities = 38/86 (44%), Positives = 57/86 (66%)
Frame = -1
Query: 1801 QAQALKASLRGQIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMSTDIPFIV 1622
Q L L QI+YYFSD+NL++D YL M++ G+V + +A FK+V ++ +I IV
Sbjct: 365 QDPPLHMKLHKQIQYYFSDENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIV 424
Query: 1621 DALLSSSTLEVQGDKVRKREGWSKWI 1544
+AL +S +EVQGD +RKR+ W W+
Sbjct: 425 EALQNSPHVEVQGDFIRKRDNWQNWV 450
>TAIR9_protein||AT5G66100.1 | Symbols: | La domain-containing protein |
chr5:26427639-26429772 FORWARD
Length = 454
Score = 74 bits (181), Expect = 3e-013
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = -1
Query: 1768 QIEYYFSDQNLLSDQYLISLMDDHGWVSISTIADFKRVKRMSTDIPFIVDALLSSSTLEV 1589
Q+EYYFS NL D++L M+D GWV + IA F+R+ ++ +I I++AL SS +E+
Sbjct: 342 QVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEI 401
Query: 1588 QGDKVRKREGWSKWI 1544
QG+ +R+R W K++
Sbjct: 402 QGETLRRRGDWDKYL 416
>TAIR9_protein||AT5G46250.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18758056 FORWARD
Length = 423
Score = 59 bits (142), Expect = 1e-008
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = -1
Query: 1768 QIEYYFSDQNLLSDQYLISLM--DDHGWVSISTIADFKRVKRMSTDIPFIVDALLSSSTL 1595
Q+EYYFSD+NL +D++L++ M + G+V ISTIA F ++K+++ D IV AL SS L
Sbjct: 110 QVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFL 169
Query: 1594 EVQGDK 1577
V D+
Sbjct: 170 VVSADE 175
>TAIR9_protein||AT5G46250.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18757723 FORWARD
Length = 341
Score = 59 bits (142), Expect = 1e-008
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = -1
Query: 1768 QIEYYFSDQNLLSDQYLISLM--DDHGWVSISTIADFKRVKRMSTDIPFIVDALLSSSTL 1595
Q+EYYFSD+NL +D++L++ M + G+V ISTIA F ++K+++ D IV AL SS L
Sbjct: 110 QVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFL 169
Query: 1594 EVQGDK 1577
V D+
Sbjct: 170 VVSADE 175
>TAIR9_protein||AT5G46250.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:18755388-18757723 FORWARD
Length = 341
Score = 59 bits (142), Expect = 1e-008
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Frame = -1
Query: 1768 QIEYYFSDQNLLSDQYLISLM--DDHGWVSISTIADFKRVKRMSTDIPFIVDALLSSSTL 1595
Q+EYYFSD+NL +D++L++ M + G+V ISTIA F ++K+++ D IV AL SS L
Sbjct: 110 QVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFL 169
Query: 1594 EVQGDK 1577
V D+
Sbjct: 170 VVSADE 175
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,261,122,910
Number of Sequences: 33410
Number of Extensions: 17261122910
Number of Successful Extensions: 753049931
Number of sequences better than 0.0: 0
|