Chrysanthenum transcriptome database

Arabidopsis blast output of UN65481


BLASTX 7.6.2

Query= UN65481 /QuerySize=1126
        (1125 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT2G27830.1 | Symbols:  | FUNCTIONS IN: molecular...    131   1e-030
TAIR9_protein||AT4G22760.1 | Symbols:  | pentatricopeptide (PPR)...     52   6e-007

>TAIR9_protein||AT2G27830.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth
        stages; BEST Arabidopsis thaliana protein match is: pentatricopeptide
        (PPR) repeat-containing protein (TAIR:AT4G22760.1); Has 68 Blast hits
        to 68 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0;
        Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
        BLink). | chr2:11860734-11861306 FORWARD

          Length = 191

 Score =  131 bits (328), Expect = 1e-030
 Identities = 72/144 (50%), Positives = 92/144 (63%), Gaps = 7/144 (4%)
 Frame = -2

Query: 869 TNKSKNARLSDKSMSFNGHAAEDM--VGKLRRPKTVPDLISNVSSMDM-----LRPXXXX 711
           T KS   +LS+K+MSF+G     +   G+LRRPKT+P+L S   S+ +     L P    
Sbjct:  12 TEKSHRRKLSEKAMSFHGRGTTPLSNPGELRRPKTLPELFSTGQSITVPETVSLPPRLTK 71

Query: 710 XXXXXXXQRSLGPVQVIISPNSSVRDLVADALRQYSKEGRRPILSSLDPSEFSLHYSQFS 531
                  Q SLG VQ+IISP S+V DL+  A+RQY KE RRP L   +PS F LHYSQFS
Sbjct:  72 LLLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQFS 131

Query: 530 LQSLEPDDKLIDLGSRNFFLCPKQ 459
           L+S+  D+KLI LGSRNFFLC ++
Sbjct: 132 LESIVRDEKLISLGSRNFFLCGRK 155

>TAIR9_protein||AT4G22760.1 | Symbols:  | pentatricopeptide (PPR)
        repeat-containing protein | chr4:11958477-11962870 FORWARD

          Length = 890

 Score =  52 bits (123), Expect = 6e-007
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = -2

Query: 683 SLGPVQVIISPNSSVRDLVADALRQYSKEGRRPILSSLDPSEFSLHYSQFSLQSLEPDDK 504
           S GPV+ ++  + +V + +   + +Y KEGR P L     S F LH S FS+Q LE  + 
Sbjct: 133 SPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDR--DSAFELHQSHFSIQCLEKREI 190

Query: 503 LIDLGSRNFFLCPKQTAT 450
           + +LGSR+F++  K   T
Sbjct: 191 IGELGSRSFYMRKKAPET 208

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,299,202,000
Number of Sequences: 33410
Number of Extensions: 13299202000
Number of Successful Extensions: 585023309
Number of sequences better than 0.0: 0