Arabidopsis blast output of UN65481
BLASTX 7.6.2 Query= UN65481 /QuerySize=1126 (1125 letters) Database: TAIR9 protein; 33,410 sequences; 13,468,323 total letters Score E Sequences producing significant alignments: (bits) Value TAIR9_protein||AT2G27830.1 | Symbols: | FUNCTIONS IN: molecular... 131 1e-030 TAIR9_protein||AT4G22760.1 | Symbols: | pentatricopeptide (PPR)... 52 6e-007 >TAIR9_protein||AT2G27830.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT4G22760.1); Has 68 Blast hits to 68 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:11860734-11861306 FORWARD Length = 191 Score = 131 bits (328), Expect = 1e-030 Identities = 72/144 (50%), Positives = 92/144 (63%), Gaps = 7/144 (4%) Frame = -2 Query: 869 TNKSKNARLSDKSMSFNGHAAEDM--VGKLRRPKTVPDLISNVSSMDM-----LRPXXXX 711 T KS +LS+K+MSF+G + G+LRRPKT+P+L S S+ + L P Sbjct: 12 TEKSHRRKLSEKAMSFHGRGTTPLSNPGELRRPKTLPELFSTGQSITVPETVSLPPRLTK 71 Query: 710 XXXXXXXQRSLGPVQVIISPNSSVRDLVADALRQYSKEGRRPILSSLDPSEFSLHYSQFS 531 Q SLG VQ+IISP S+V DL+ A+RQY KE RRP L +PS F LHYSQFS Sbjct: 72 LLLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQFS 131 Query: 530 LQSLEPDDKLIDLGSRNFFLCPKQ 459 L+S+ D+KLI LGSRNFFLC ++ Sbjct: 132 LESIVRDEKLISLGSRNFFLCGRK 155 >TAIR9_protein||AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr4:11958477-11962870 FORWARD Length = 890 Score = 52 bits (123), Expect = 6e-007 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%) Frame = -2 Query: 683 SLGPVQVIISPNSSVRDLVADALRQYSKEGRRPILSSLDPSEFSLHYSQFSLQSLEPDDK 504 S GPV+ ++ + +V + + + +Y KEGR P L S F LH S FS+Q LE + Sbjct: 133 SPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDR--DSAFELHQSHFSIQCLEKREI 190 Query: 503 LIDLGSRNFFLCPKQTAT 450 + +LGSR+F++ K T Sbjct: 191 IGELGSRSFYMRKKAPET 208 Database: TAIR9 protein Posted date: Wed Jul 08 15:16:08 2009 Number of letters in database: 13,468,323 Number of sequences in database: 33,410 Lambda K H 0.267 0.041 0.140 Gapped Lambda K H 0.267 0.041 0.140 Matrix: blosum62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,299,202,000 Number of Sequences: 33410 Number of Extensions: 13299202000 Number of Successful Extensions: 585023309 Number of sequences better than 0.0: 0 |