Chrysanthenum transcriptome database

Arabidopsis blast output of UN62613


BLASTX 7.6.2

Query= UN62613 /QuerySize=321
        (320 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA bindi...     74   1e-014
TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR3...     71   9e-014
TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR3...     71   9e-014
TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding...     60   2e-010
TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding...     58   8e-010

>TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA binding / nucleic
        acid binding / nucleotide binding | chr3:4429564-4431602 REVERSE

          Length = 263

 Score =  74 bits (180), Expect = 1e-014
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -3

Query: 120 ERDLPTSLLVRNLRLDCRPEDLRRPFGQFGPLKDIYLPRD 1
           + DLPTSLLVRNLR DCR EDLRRPF QFGP+KDIYLPRD
Sbjct:  32 DSDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRD 71

>TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
        / protein binding | chr1:20630676-20632695 FORWARD

          Length = 288

 Score =  71 bits (173), Expect = 9e-014
 Identities = 33/39 (84%), Positives = 35/39 (89%)
 Frame = -3

Query: 117 RDLPTSLLVRNLRLDCRPEDLRRPFGQFGPLKDIYLPRD 1
           RDLPTSLLVRNLR DCR EDLR+ F QFGP+KDIYLPRD
Sbjct:  32 RDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRD 70

>TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
        / protein binding | chr1:20630676-20632567 FORWARD

          Length = 221

 Score =  71 bits (173), Expect = 9e-014
 Identities = 33/39 (84%), Positives = 35/39 (89%)
 Frame = -3

Query: 117 RDLPTSLLVRNLRLDCRPEDLRRPFGQFGPLKDIYLPRD 1
           RDLPTSLLVRNLR DCR EDLR+ F QFGP+KDIYLPRD
Sbjct:  32 RDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRD 70

>TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid
        binding / nucleotide binding | chr3:20561024-20563502 FORWARD

          Length = 263

 Score =  60 bits (144), Expect = 2e-010
 Identities = 24/34 (70%), Positives = 31/34 (91%)
 Frame = -3

Query: 102 SLLVRNLRLDCRPEDLRRPFGQFGPLKDIYLPRD 1
           SLLVRN+ LDCRPE+LR PF +FGP++D+Y+PRD
Sbjct:  48 SLLVRNIPLDCRPEELREPFERFGPVRDVYIPRD 81

>TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding / nucleic acid
        binding / nucleotide binding | chr5:6268925-6271158 REVERSE

          Length = 237

 Score =  58 bits (139), Expect = 8e-010
 Identities = 30/49 (61%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
 Frame = -3

Query: 135 RGRPVERDL----PTSLLVRNLRLDCRPEDLRRPFGQFGPLKDIYLPRD 1
           R RP  RD     P+ LL+RNL LD RP DLR  F +FGPLKDIYLPR+
Sbjct:  33 RERPSSRDHESSGPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRN 81

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,721,504,308
Number of Sequences: 33410
Number of Extensions: 12721504308
Number of Successful Extensions: 549546329
Number of sequences better than 0.0: 0