Chrysanthenum transcriptome database

Arabidopsis blast output of UN62297


BLASTX 7.6.2

Query= UN62297 /QuerySize=793
        (792 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G63030.1 | Symbols: MBD4 | MBD4; DNA binding /...    140   1e-033
TAIR9_protein||AT4G22745.1 | Symbols: MBD1 | MBD1; DNA binding /...    136   3e-032
TAIR9_protein||AT4G00416.1 | Symbols: MBD3 | MBD3; DNA binding /...    103   1e-022
TAIR9_protein||AT5G35330.1 | Symbols: MBD02, MBD2, ATMBD2 | MBD0...     83   2e-016
TAIR9_protein||AT5G35330.2 | Symbols: MBD02, MBD2 | MBD02 (METHY...     83   2e-016

>TAIR9_protein||AT3G63030.1 | Symbols: MBD4 | MBD4; DNA binding / DNA
        demethylase/ methyl-CpG binding | chr3:23295394-23296425 FORWARD

          Length = 187

 Score =  140 bits (351), Expect = 1e-033
 Identities = 65/134 (48%), Positives = 91/134 (67%), Gaps = 2/134 (1%)
 Frame = -2

Query: 407 PKTIID-FAVQCHTCRKWRKLETEEHFEEFRSKHTKDRFNCNKLPGTTCEDTTNIMNYDS 231
           P  +ID +A QC  C KWR ++++E +E+ RSK  +D FNC K  G +CE+  +I +YDS
Sbjct:  21 PGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQKKQGMSCEEPADI-DYDS 79

Query: 230 SRVWAMDKPNIPKTPQGFKRIVSLRNDCSKLDVQYLTPQKKKIRSGVEMAFFLDKHPEFK 51
           SR W +DKP +PKTP+GFKR + LR D SK+D  Y TP  KK+RS  E+A F++ +PEF+
Sbjct:  80 SRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLRSRNEIAAFVEANPEFR 139

Query:  50 DLSPSDFCFRAPKL 9
           +    DF F  PK+
Sbjct: 140 NAPLGDFNFTVPKV 153

>TAIR9_protein||AT4G22745.1 | Symbols: MBD1 | MBD1; DNA binding / DNA
        demethylase/ methyl-CpG binding | chr4:11947421-11948514 REVERSE

          Length = 205

 Score =  136 bits (340), Expect = 3e-032
 Identities = 66/150 (44%), Positives = 97/150 (64%), Gaps = 3/150 (2%)
 Frame = -2

Query: 458 SELTTVLTDSEKPGTTLPKTIIDFAVQCHTCRKWRKLETEEHFEEFRSKHTKDRFNCNKL 279
           +E TT+    +K   T  ++I  FAVQC  C KWRK++T++ +E+ RS+  +D F C   
Sbjct:  34 AEPTTIKV--QKKAGTPGRSIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKTK 91

Query: 278 PGTTCEDTTNIMNYDSSRVWAMDKPNIPKTPQGFKRIVSLRNDCSKLDVQYLTPQKKKIR 99
            G +CED  + +NYDSSR W +DKP +P+TP+GFKR + LR D SK+D  Y+TP  KK++
Sbjct:  92 EGVSCEDVGD-LNYDSSRTWVIDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTGKKLK 150

Query:  98 SGVEMAFFLDKHPEFKDLSPSDFCFRAPKL 9
           S  E+A F+D + ++K     DF F  PK+
Sbjct: 151 SRNEIAAFIDANQDYKYALLGDFNFTVPKV 180

>TAIR9_protein||AT4G00416.1 | Symbols: MBD3 | MBD3; DNA binding / methyl-CpG
        binding | chr4:179022-179513 FORWARD

          Length = 164

 Score =  103 bits (256), Expect = 1e-022
 Identities = 56/135 (41%), Positives = 86/135 (63%), Gaps = 10/135 (7%)
 Frame = -2

Query: 401 TIID-FAVQCHTCRKWRKLETEEHFEEFRSKHTKDRFNCNKLPGTTCEDTTN-IMNYDSS 228
           T+ID +A QC  C K R +E++E +EE RSK  +  F C +     CE+  + +MN+DS 
Sbjct:   7 TLIDSYAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR-----CEEPGDMVMNFDSL 61

Query: 227 RV-WAMDKPNIPKTPQGFKRIVSLRNDCSKLDVQY--LTPQKKKIRSGVEMAFFLDKHPE 57
            + W  D+ +IPKTPQG KR++ +R +C K+DV Y  L P++K+ +S  E+A F++   E
Sbjct:  62 TMRWFQDEHSIPKTPQGLKRVLVVRTNCVKVDVYYESLAPRRKRFKSIKEVATFIEDKEE 121

Query:  56 FKDLSPSDFCFRAPK 12
           FKD++  +  F APK
Sbjct: 122 FKDMTLEEVSFAAPK 136

>TAIR9_protein||AT5G35330.1 | Symbols: MBD02, MBD2, ATMBD2 | MBD02
        (METHYL-CPG-BINDING DOMAIN PROTEIN 02); DNA binding / DNA demethylase |
        chr5:13523725-13525270 REVERSE

          Length = 273

 Score =  83 bits (203), Expect = 2e-016
 Identities = 45/133 (33%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
 Frame = -2

Query: 389 FAVQCHTCRKWRKLETEEHFEEFRSKHTKDRFNCNKL----PGTTCEDTTNIMNYDSSRV 222
           F VQC +C KWR + + + +EE R +  ++ F C+      P  +C+   +I   D +R+
Sbjct:  59 FTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQ-DGTRL 117

Query: 221 WAMDKPNIPKTPQGFKRIVSLRNDCSK--LDVQYLTPQKKKIRSGVEMAFFLDKHPEF-- 54
           WA+DKPNI + P G++R++ +R +      DV Y+ P  KK+RS VE+  +L+ + E+  
Sbjct: 118 WAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIG 177

Query:  53 KDLSPSDFCFRAP 15
           + +  S F F+ P
Sbjct: 178 EGVKLSQFSFQIP 190

>TAIR9_protein||AT5G35330.2 | Symbols: MBD02, MBD2 | MBD02 (METHYL-CPG-BINDING
        DOMAIN PROTEIN 02); DNA binding / DNA demethylase |
        chr5:13523725-13525270 REVERSE

          Length = 273

 Score =  83 bits (203), Expect = 2e-016
 Identities = 45/133 (33%), Positives = 77/133 (57%), Gaps = 9/133 (6%)
 Frame = -2

Query: 389 FAVQCHTCRKWRKLETEEHFEEFRSKHTKDRFNCNKL----PGTTCEDTTNIMNYDSSRV 222
           F VQC +C KWR + + + +EE R +  ++ F C+      P  +C+   +I   D +R+
Sbjct:  59 FTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQ-DGTRL 117

Query: 221 WAMDKPNIPKTPQGFKRIVSLRNDCSK--LDVQYLTPQKKKIRSGVEMAFFLDKHPEF-- 54
           WA+DKPNI + P G++R++ +R +      DV Y+ P  KK+RS VE+  +L+ + E+  
Sbjct: 118 WAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIG 177

Query:  53 KDLSPSDFCFRAP 15
           + +  S F F+ P
Sbjct: 178 EGVKLSQFSFQIP 190

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,608,924,232
Number of Sequences: 33410
Number of Extensions: 12608924232
Number of Successful Extensions: 544405094
Number of sequences better than 0.0: 0