Arabidopsis blast output of UN62297
BLASTX 7.6.2 Query= UN62297 /QuerySize=793 (792 letters) Database: TAIR9 protein; 33,410 sequences; 13,468,323 total letters Score E Sequences producing significant alignments: (bits) Value TAIR9_protein||AT3G63030.1 | Symbols: MBD4 | MBD4; DNA binding /... 140 1e-033 TAIR9_protein||AT4G22745.1 | Symbols: MBD1 | MBD1; DNA binding /... 136 3e-032 TAIR9_protein||AT4G00416.1 | Symbols: MBD3 | MBD3; DNA binding /... 103 1e-022 TAIR9_protein||AT5G35330.1 | Symbols: MBD02, MBD2, ATMBD2 | MBD0... 83 2e-016 TAIR9_protein||AT5G35330.2 | Symbols: MBD02, MBD2 | MBD02 (METHY... 83 2e-016 >TAIR9_protein||AT3G63030.1 | Symbols: MBD4 | MBD4; DNA binding / DNA demethylase/ methyl-CpG binding | chr3:23295394-23296425 FORWARD Length = 187 Score = 140 bits (351), Expect = 1e-033 Identities = 65/134 (48%), Positives = 91/134 (67%), Gaps = 2/134 (1%) Frame = -2 Query: 407 PKTIID-FAVQCHTCRKWRKLETEEHFEEFRSKHTKDRFNCNKLPGTTCEDTTNIMNYDS 231 P +ID +A QC C KWR ++++E +E+ RSK +D FNC K G +CE+ +I +YDS Sbjct: 21 PGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQKKQGMSCEEPADI-DYDS 79 Query: 230 SRVWAMDKPNIPKTPQGFKRIVSLRNDCSKLDVQYLTPQKKKIRSGVEMAFFLDKHPEFK 51 SR W +DKP +PKTP+GFKR + LR D SK+D Y TP KK+RS E+A F++ +PEF+ Sbjct: 80 SRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTGKKLRSRNEIAAFVEANPEFR 139 Query: 50 DLSPSDFCFRAPKL 9 + DF F PK+ Sbjct: 140 NAPLGDFNFTVPKV 153 >TAIR9_protein||AT4G22745.1 | Symbols: MBD1 | MBD1; DNA binding / DNA demethylase/ methyl-CpG binding | chr4:11947421-11948514 REVERSE Length = 205 Score = 136 bits (340), Expect = 3e-032 Identities = 66/150 (44%), Positives = 97/150 (64%), Gaps = 3/150 (2%) Frame = -2 Query: 458 SELTTVLTDSEKPGTTLPKTIIDFAVQCHTCRKWRKLETEEHFEEFRSKHTKDRFNCNKL 279 +E TT+ +K T ++I FAVQC C KWRK++T++ +E+ RS+ +D F C Sbjct: 34 AEPTTIKV--QKKAGTPGRSIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKTK 91 Query: 278 PGTTCEDTTNIMNYDSSRVWAMDKPNIPKTPQGFKRIVSLRNDCSKLDVQYLTPQKKKIR 99 G +CED + +NYDSSR W +DKP +P+TP+GFKR + LR D SK+D Y+TP KK++ Sbjct: 92 EGVSCEDVGD-LNYDSSRTWVIDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTGKKLK 150 Query: 98 SGVEMAFFLDKHPEFKDLSPSDFCFRAPKL 9 S E+A F+D + ++K DF F PK+ Sbjct: 151 SRNEIAAFIDANQDYKYALLGDFNFTVPKV 180 >TAIR9_protein||AT4G00416.1 | Symbols: MBD3 | MBD3; DNA binding / methyl-CpG binding | chr4:179022-179513 FORWARD Length = 164 Score = 103 bits (256), Expect = 1e-022 Identities = 56/135 (41%), Positives = 86/135 (63%), Gaps = 10/135 (7%) Frame = -2 Query: 401 TIID-FAVQCHTCRKWRKLETEEHFEEFRSKHTKDRFNCNKLPGTTCEDTTN-IMNYDSS 228 T+ID +A QC C K R +E++E +EE RSK + F C + CE+ + +MN+DS Sbjct: 7 TLIDSYAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR-----CEEPGDMVMNFDSL 61 Query: 227 RV-WAMDKPNIPKTPQGFKRIVSLRNDCSKLDVQY--LTPQKKKIRSGVEMAFFLDKHPE 57 + W D+ +IPKTPQG KR++ +R +C K+DV Y L P++K+ +S E+A F++ E Sbjct: 62 TMRWFQDEHSIPKTPQGLKRVLVVRTNCVKVDVYYESLAPRRKRFKSIKEVATFIEDKEE 121 Query: 56 FKDLSPSDFCFRAPK 12 FKD++ + F APK Sbjct: 122 FKDMTLEEVSFAAPK 136 >TAIR9_protein||AT5G35330.1 | Symbols: MBD02, MBD2, ATMBD2 | MBD02 (METHYL-CPG-BINDING DOMAIN PROTEIN 02); DNA binding / DNA demethylase | chr5:13523725-13525270 REVERSE Length = 273 Score = 83 bits (203), Expect = 2e-016 Identities = 45/133 (33%), Positives = 77/133 (57%), Gaps = 9/133 (6%) Frame = -2 Query: 389 FAVQCHTCRKWRKLETEEHFEEFRSKHTKDRFNCNKL----PGTTCEDTTNIMNYDSSRV 222 F VQC +C KWR + + + +EE R + ++ F C+ P +C+ +I D +R+ Sbjct: 59 FTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQ-DGTRL 117 Query: 221 WAMDKPNIPKTPQGFKRIVSLRNDCSK--LDVQYLTPQKKKIRSGVEMAFFLDKHPEF-- 54 WA+DKPNI + P G++R++ +R + DV Y+ P KK+RS VE+ +L+ + E+ Sbjct: 118 WAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIG 177 Query: 53 KDLSPSDFCFRAP 15 + + S F F+ P Sbjct: 178 EGVKLSQFSFQIP 190 >TAIR9_protein||AT5G35330.2 | Symbols: MBD02, MBD2 | MBD02 (METHYL-CPG-BINDING DOMAIN PROTEIN 02); DNA binding / DNA demethylase | chr5:13523725-13525270 REVERSE Length = 273 Score = 83 bits (203), Expect = 2e-016 Identities = 45/133 (33%), Positives = 77/133 (57%), Gaps = 9/133 (6%) Frame = -2 Query: 389 FAVQCHTCRKWRKLETEEHFEEFRSKHTKDRFNCNKL----PGTTCEDTTNIMNYDSSRV 222 F VQC +C KWR + + + +EE R + ++ F C+ P +C+ +I D +R+ Sbjct: 59 FTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREWKPDISCDVPADIYQ-DGTRL 117 Query: 221 WAMDKPNIPKTPQGFKRIVSLRNDCSK--LDVQYLTPQKKKIRSGVEMAFFLDKHPEF-- 54 WA+DKPNI + P G++R++ +R + DV Y+ P KK+RS VE+ +L+ + E+ Sbjct: 118 WAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKKLRSTVEVQKYLNDNSEYIG 177 Query: 53 KDLSPSDFCFRAP 15 + + S F F+ P Sbjct: 178 EGVKLSQFSFQIP 190 Database: TAIR9 protein Posted date: Wed Jul 08 15:16:08 2009 Number of letters in database: 13,468,323 Number of sequences in database: 33,410 Lambda K H 0.267 0.041 0.140 Gapped Lambda K H 0.267 0.041 0.140 Matrix: blosum62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,608,924,232 Number of Sequences: 33410 Number of Extensions: 12608924232 Number of Successful Extensions: 544405094 Number of sequences better than 0.0: 0 |