Chrysanthenum transcriptome database

GenBank blast output of UN60876


BLASTX 7.6.2

Query= UN60876 /QuerySize=794
        (793 letters)

Database: GenBank nr;
          20,571,509 sequences; 7,061,663,739 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|225425084|ref|XP_002273586.1| PREDICTED: uncharacterized prot...     88   2e-015
gi|224098862|ref|XP_002311296.1| predicted protein [Populus tric...     85   2e-014
gi|255559159|ref|XP_002520601.1| RNA binding protein, putative [...     84   3e-014
gi|363808018|ref|NP_001241952.1| uncharacterized protein LOC1007...     82   1e-013
gi|224109048|ref|XP_002315063.1| predicted protein [Populus tric...     80   3e-013
gi|115471625|ref|NP_001059411.1| Os07g0296200 [Oryza sativa Japo...     75   1e-011
gi|50509050|dbj|BAD32064.1| RRM-containing RNA-binding protein-l...     75   1e-011
gi|357121679|ref|XP_003562545.1| PREDICTED: uncharacterized prot...     74   3e-011
gi|50725051|dbj|BAD33184.1| RNA-binding protein-like [Oryza sati...     72   1e-010

>gi|225425084|ref|XP_002273586.1| PREDICTED: uncharacterized protein
        LOC100249627 [Vitis vinifera]

          Length = 414

 Score =  88 bits (216), Expect = 2e-015
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 474 QDDGEMYDKFGNLKKKFRVKTQQAEVGQVLPGTGRAGWEVEELGM 340
           +DDGE+YD+FGNLKKKFR KTQQAE GQVLPG GRAGWEVEELGM
Sbjct: 285 EDDGELYDEFGNLKKKFRAKTQQAEAGQVLPGAGRAGWEVEELGM 329

>gi|224098862|ref|XP_002311296.1| predicted protein [Populus trichocarpa]

          Length = 380

 Score =  85 bits (208), Expect = 2e-014
 Identities = 38/53 (71%), Positives = 45/53 (84%)
 Frame = -2

Query: 498 TRR*NIYLQDDGEMYDKFGNLKKKFRVKTQQAEVGQVLPGTGRAGWEVEELGM 340
           T+R     +DDGE+YD+FGNLKKKFR KTQQAE G+VLPG GRAGWEVEE+G+
Sbjct: 267 TKRRRKEAEDDGELYDEFGNLKKKFRAKTQQAEAGKVLPGAGRAGWEVEEIGV 319

>gi|255559159|ref|XP_002520601.1| RNA binding protein, putative [Ricinus
        communis]

          Length = 483

 Score =  84 bits (206), Expect = 3e-014
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = -2

Query: 474 QDDGEMYDKFGNLKKKFRVKTQQAEVGQVLPGTGRAGWEVEELGM 340
           +DDGE+YD+FGNLKKKFR KTQQAE G+VLPG GRAGWEVEELG+
Sbjct: 279 EDDGELYDEFGNLKKKFRAKTQQAESGRVLPGAGRAGWEVEELGV 323

>gi|363808018|ref|NP_001241952.1| uncharacterized protein LOC100780819 [Glycine
        max]

          Length = 365

 Score =  82 bits (201), Expect = 1e-013
 Identities = 38/53 (71%), Positives = 44/53 (83%)
 Frame = -2

Query: 498 TRR*NIYLQDDGEMYDKFGNLKKKFRVKTQQAEVGQVLPGTGRAGWEVEELGM 340
           TRR     +DDGE+YD+FGNLKKKFR KTQQAE  + LPG+GRAGWEVEELG+
Sbjct: 267 TRRRRREAEDDGELYDEFGNLKKKFRAKTQQAEAARGLPGSGRAGWEVEELGI 319

>gi|224109048|ref|XP_002315063.1| predicted protein [Populus trichocarpa]

          Length = 387

 Score =  80 bits (197), Expect = 3e-013
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = -2

Query: 474 QDDGEMYDKFGNLKKKFRVKTQQAEVGQVLPGTGRAGWEVEELG 343
           +DDGE+YD+FGNLKKKFR KTQQAE G+VL G GRAGWEVEELG
Sbjct: 276 EDDGELYDEFGNLKKKFRAKTQQAEAGRVLLGAGRAGWEVEELG 319


 Score =  76 bits (185), Expect = 8e-012
 Identities = 35/54 (64%), Positives = 39/54 (72%)
 Frame = -3

Query: 680 GNINWAKRLKCNICNTNKPXXXXXXXXXXXXXXYKELDEEELEKTWRRRREAKE 519
           GNINWAKR+KCNICNTNKP              YKELDEEELE+T RRR+EA+E
Sbjct: 223 GNINWAKRMKCNICNTNKPGHNEAGVRGGRAGGYKELDEEELEETKRRRKEAEE 276

>gi|115471625|ref|NP_001059411.1| Os07g0296200 [Oryza sativa Japonica Group]

          Length = 394

 Score =  75 bits (183), Expect = 1e-011
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -2

Query: 474 QDDGEMYDKFGNLKKKFRVKTQQAEVGQVLPGTGRAGWEVEELG 343
           +DDGEMYD+FGNLKKKFR KTQQ E    LPG+GRAGWEVE+ G
Sbjct: 279 EDDGEMYDEFGNLKKKFRAKTQQTENAPTLPGSGRAGWEVEQRG 322

>gi|50509050|dbj|BAD32064.1| RRM-containing RNA-binding protein-like [Oryza
        sativa Japonica Group]

          Length = 360

 Score =  75 bits (183), Expect = 1e-011
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -2

Query: 474 QDDGEMYDKFGNLKKKFRVKTQQAEVGQVLPGTGRAGWEVEELG 343
           +DDGEMYD+FGNLKKKFR KTQQ E    LPG+GRAGWEVE+ G
Sbjct: 245 EDDGEMYDEFGNLKKKFRAKTQQTENAPTLPGSGRAGWEVEQRG 288

>gi|357121679|ref|XP_003562545.1| PREDICTED: uncharacterized protein
        LOC100833358 [Brachypodium distachyon]

          Length = 389

 Score =  74 bits (180), Expect = 3e-011
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = -2

Query: 474 QDDGEMYDKFGNLKKKFRVKTQQAEVGQVLPGTGRAGWEVEELG 343
           +DDGE+YD+FGNLKKKFRVK+QQ E    LPG+GRAGWEVE+ G
Sbjct: 273 EDDGEIYDEFGNLKKKFRVKSQQTESAPTLPGSGRAGWEVEQRG 316

>gi|50725051|dbj|BAD33184.1| RNA-binding protein-like [Oryza sativa Japonica
        Group]

          Length = 414

 Score =  72 bits (174), Expect = 1e-010
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = -2

Query: 474 QDDGEMYDKFGNLKKKFRVKTQQAEVGQVLPGTGRAGWEVE 352
           +DDGEMYD+FGNLKKKFR KTQQ E    LPG+GRAGWEV+
Sbjct: 274 EDDGEMYDEFGNLKKKFRAKTQQTENAPTLPGSGRAGWEVQ 314

  Database: GenBank nr
    Posted date:  Thu Sep 27 19:07:00 2012
  Number of letters in database: 7,061,663,739
  Number of sequences in database:  20,571,509

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,435,357,109,630
Number of Sequences: 20571509
Number of Extensions: 3435357109630
Number of Successful Extensions: 984337982
Number of sequences better than 0.0: 0