Arabidopsis blast output of UN60441
BLASTX 7.6.2
Query= UN60441 /QuerySize=1388
(1387 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G13740.1 | Symbols: AFP2 | AFP2 (ABI FIVE BIND... 134 2e-031
TAIR9_protein||AT3G29575.1 | Symbols: AFP3 | AFP3 (ABI FIVE BIND... 121 1e-027
TAIR9_protein||AT3G29575.3 | Symbols: AFP3 | AFP3 (ABI FIVE BIND... 121 1e-027
TAIR9_protein||AT3G29575.4 | Symbols: AFP3 | AFP3 (ABI FIVE BIND... 121 1e-027
TAIR9_protein||AT1G69260.1 | Symbols: AFP1 | AFP1 (ABI FIVE BIND... 119 5e-027
TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport facto... 90 3e-018
TAIR9_protein||AT3G02140.1 | Symbols: TMAC2, AFP4 | TMAC2 (TWO O... 87 2e-017
TAIR9_protein||AT4G28910.2 | Symbols: | LOCATED IN: cellular_co... 61 2e-009
TAIR9_protein||AT4G28910.1 | Symbols: | LOCATED IN: cellular_co... 61 2e-009
TAIR9_protein||AT4G28910.3 | Symbols: | LOCATED IN: cellular_co... 61 2e-009
>TAIR9_protein||AT1G13740.1 | Symbols: AFP2 | AFP2 (ABI FIVE BINDING PROTEIN 2)
| chr1:4713969-4715158 FORWARD
Length = 349
Score = 134 bits (335), Expect = 2e-031
Identities = 59/91 (64%), Positives = 77/91 (84%), Gaps = 2/91 (2%)
Frame = -1
Query: 412 KTENPTNNKGKEIRSNT--FDMPCVFTQGDGPSGRRIEGILYKYGKGEEVKIMCVCHGSF 239
++E+ + KGK + ++T DMPCVFT+GDGP+GRR++GILYKYGKGEEV+IMC+CHGSF
Sbjct: 258 RSEDSVDRKGKGMATSTGLVDMPCVFTKGDGPNGRRVDGILYKYGKGEEVRIMCICHGSF 317
Query: 238 LSPAEFVMHAGGTDIVHPLKHIVVNPNSSTY 146
L+PAEFV H GG D+ PL+HIVVN +SST+
Sbjct: 318 LTPAEFVKHGGGGDVDRPLRHIVVNTSSSTF 348
>TAIR9_protein||AT3G29575.1 | Symbols: AFP3 | AFP3 (ABI FIVE BINDING PROTEIN 3)
| chr3:11382416-11383657 REVERSE
Length = 232
Score = 121 bits (302), Expect = 1e-027
Identities = 57/92 (61%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Frame = -1
Query: 430 VPPSQPKTENPTNNKGKEIRSNTF-DMPCVFTQGDGPSGRRIEGILYKYGKGEEVKIMCV 254
V S ++ N GKE N DMP V T GDGP+G++I G LY+Y KGEEV+I+CV
Sbjct: 137 VETSPSSAQSQPENLGKEASQNIIEDMPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCV 196
Query: 253 CHGSFLSPAEFVMHAGGTDIVHPLKHIVVNPN 158
CHGSFLSPAEFV HAGG D+ HPLKHIVVNP+
Sbjct: 197 CHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPS 228
>TAIR9_protein||AT3G29575.3 | Symbols: AFP3 | AFP3 (ABI FIVE BINDING PROTEIN 3)
| chr3:11382416-11383657 REVERSE
Length = 232
Score = 121 bits (302), Expect = 1e-027
Identities = 57/92 (61%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Frame = -1
Query: 430 VPPSQPKTENPTNNKGKEIRSNTF-DMPCVFTQGDGPSGRRIEGILYKYGKGEEVKIMCV 254
V S ++ N GKE N DMP V T GDGP+G++I G LY+Y KGEEV+I+CV
Sbjct: 137 VETSPSSAQSQPENLGKEASQNIIEDMPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCV 196
Query: 253 CHGSFLSPAEFVMHAGGTDIVHPLKHIVVNPN 158
CHGSFLSPAEFV HAGG D+ HPLKHIVVNP+
Sbjct: 197 CHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPS 228
>TAIR9_protein||AT3G29575.4 | Symbols: AFP3 | AFP3 (ABI FIVE BINDING PROTEIN 3)
| chr3:11382416-11383657 REVERSE
Length = 232
Score = 121 bits (302), Expect = 1e-027
Identities = 57/92 (61%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Frame = -1
Query: 430 VPPSQPKTENPTNNKGKEIRSNTF-DMPCVFTQGDGPSGRRIEGILYKYGKGEEVKIMCV 254
V S ++ N GKE N DMP V T GDGP+G++I G LY+Y KGEEV+I+CV
Sbjct: 137 VETSPSSAQSQPENLGKEASQNIIEDMPFVSTTGDGPNGKKINGFLYRYRKGEEVRIVCV 196
Query: 253 CHGSFLSPAEFVMHAGGTDIVHPLKHIVVNPN 158
CHGSFLSPAEFV HAGG D+ HPLKHIVVNP+
Sbjct: 197 CHGSFLSPAEFVKHAGGGDVAHPLKHIVVNPS 228
>TAIR9_protein||AT1G69260.1 | Symbols: AFP1 | AFP1 (ABI FIVE BINDING PROTEIN) |
chr1:26039314-26040570 FORWARD
Length = 346
Score = 119 bits (297), Expect = 5e-027
Identities = 50/72 (69%), Positives = 63/72 (87%)
Frame = -1
Query: 358 DMPCVFTQGDGPSGRRIEGILYKYGKGEEVKIMCVCHGSFLSPAEFVMHAGGTDIVHPLK 179
+MPCVFT+GDGP+G+R++GILY+YG GEEV+IMCVCHG FLSPA+FV HAGG + HPL+
Sbjct: 273 EMPCVFTKGDGPNGKRVDGILYRYGSGEEVRIMCVCHGDFLSPADFVKHAGGPHVDHPLR 332
Query: 178 HIVVNPNSSTYL 143
HIVVN +S + L
Sbjct: 333 HIVVNTSSPSNL 344
>TAIR9_protein||AT3G07250.1 | Symbols: | nuclear transport factor 2 (NTF2)
family protein / RNA recognition motif (RRM)-containing protein |
chr3:2300579-2308305 REVERSE
Length = 1295
Score = 90 bits (222), Expect = 3e-018
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -1
Query: 397 TNNKGKEIRSNTFDMPCVFTQGDGPSGRRIEGILYKYGKGEEVKIMCVCHGSFLSPAEFV 218
TN+ G MPCV + G+GP G+ + G LY+Y K E+ I+CVCHG+ SPAEF+
Sbjct: 206 TNSNGNGSLLPFAQMPCVTSTGNGPEGKTVNGFLYRYSK-SEISIICVCHGTSFSPAEFI 264
Query: 217 MHAGGTDIVHPLKHIVV 167
+HAGGT++ HPL+HI V
Sbjct: 265 VHAGGTNVSHPLRHITV 281
>TAIR9_protein||AT3G02140.1 | Symbols: TMAC2, AFP4 | TMAC2 (TWO OR MORE
ABRES-CONTAINING GENE 2) | chr3:385478-386437 REVERSE
Length = 320
Score = 87 bits (214), Expect = 2e-017
Identities = 46/86 (53%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Frame = -1
Query: 412 KTENPTNNKGKEIRSNTF-DMPCVFTQGDGPSGRRIEGILYKY-GKGEEVKIMCVCHGSF 239
K +N N G E N DMPCV T+ G G+R+EG LY Y G EEVKI+CVCHGSF
Sbjct: 221 KQKNNVENSGMEKARNILEDMPCVSTRDVGADGKRVEGFLYWYGGNKEEVKIVCVCHGSF 280
Query: 238 LSPAEFVMHAGGTDIVHPLKHIVVNP 161
LSPAEFV H GGT +++NP
Sbjct: 281 LSPAEFVRHGGGTVSDDDGGDVMINP 306
>TAIR9_protein||AT4G28910.2 | Symbols: | LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675
(InterPro:IPR012463); BEST Arabidopsis thaliana protein match is:
nuclear transport factor 2 (NTF2) family protein / RNA recognition
motif (RRM)-containing protein (TAIR:AT3G07250.1); Has 223 Blast hits
to 204 proteins in 56 species: Archae - 2; Bacteria - 11; Metazoa - 48;
Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source:
NCBI BLink). | chr4:14264330-14265680 REVERSE
Length = 426
Score = 61 bits (146), Expect = 2e-009
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = -1
Query: 358 DMPCVFTQGDGPSGRRIEGILYKYGKGEEVKIMCVCHGSFLSPAEFVMHA 209
++P V T G GP GR I G+ Y+Y ++KI+C CHGS +SP EFV HA
Sbjct: 357 NLPWVSTTGSGPHGRTISGVTYRY-NANQIKIVCACHGSHMSPEEFVRHA 405
>TAIR9_protein||AT4G28910.1 | Symbols: | LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675
(InterPro:IPR012463); BEST Arabidopsis thaliana protein match is:
nuclear transport factor 2 (NTF2) family protein / RNA recognition
motif (RRM)-containing protein (TAIR:AT3G07250.1); Has 223 Blast hits
to 204 proteins in 56 species: Archae - 2; Bacteria - 11; Metazoa - 48;
Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source:
NCBI BLink). | chr4:14264330-14265680 REVERSE
Length = 426
Score = 61 bits (146), Expect = 2e-009
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = -1
Query: 358 DMPCVFTQGDGPSGRRIEGILYKYGKGEEVKIMCVCHGSFLSPAEFVMHA 209
++P V T G GP GR I G+ Y+Y ++KI+C CHGS +SP EFV HA
Sbjct: 357 NLPWVSTTGSGPHGRTISGVTYRY-NANQIKIVCACHGSHMSPEEFVRHA 405
>TAIR9_protein||AT4G28910.3 | Symbols: | LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675
(InterPro:IPR012463); BEST Arabidopsis thaliana protein match is:
nuclear transport factor 2 (NTF2) family protein / RNA recognition
motif (RRM)-containing protein (TAIR:AT3G07250.1); Has 223 Blast hits
to 204 proteins in 56 species: Archae - 2; Bacteria - 11; Metazoa - 48;
Fungi - 32; Plants - 89; Viruses - 3; Other Eukaryotes - 38 (source:
NCBI BLink). | chr4:14264330-14265680 REVERSE
Length = 426
Score = 61 bits (146), Expect = 2e-009
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = -1
Query: 358 DMPCVFTQGDGPSGRRIEGILYKYGKGEEVKIMCVCHGSFLSPAEFVMHA 209
++P V T G GP GR I G+ Y+Y ++KI+C CHGS +SP EFV HA
Sbjct: 357 NLPWVSTTGSGPHGRTISGVTYRY-NANQIKIVCACHGSHMSPEEFVRHA 405
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,160,964,428
Number of Sequences: 33410
Number of Extensions: 12160964428
Number of Successful Extensions: 504503031
Number of sequences better than 0.0: 0
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