SwissProt blast output of UN58992
BLASTX 7.6.2
Query= UN58992 /QuerySize=2520
(2519 letters)
Database: Uniprot/SwissProt;
537,505 sequences; 190,795,139 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6YYA3|CRS1_ORYSJ Chloroplastic group IIA intron splicing fac... 266 9e-070
sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing fac... 210 4e-053
sp|Q9LF10|CRS1_ARATH Chloroplastic group IIA intron splicing fac... 192 1e-047
sp|Q67XL4|Y3544_ARATH Uncharacterized CRM domain-containing prot... 99 1e-019
>sp|Q6YYA3|CRS1_ORYSJ Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0360100 PE=2
SV=1
Length = 725
Score = 266 bits (678), Expect = 9e-070
Identities = 153/334 (45%), Positives = 197/334 (58%), Gaps = 15/334 (4%)
Frame = -3
Query: 2115 KKRTKAPTLAELTLEDSEXXXXXXXXXXXXXXISIPKAGITGAVLDKIHDQWRK-SELVR 1939
+K+T+ PT AE LE E KAGIT V++++ QW K EL
Sbjct: 142 EKKTRVPTRAETELEAGELERLRRAARGKERWARAKKAGITDEVVEEVRGQWAKGQELAG 201
Query: 1938 LKFHEVLARDMKTAHEIVQRRTGGLVIWQSGSVMMVYRGANNAGPSSRPRSNEKDGDALF 1759
++ E L R M A EI++ +TGGLV+W G + VYRG++ + R R + L
Sbjct: 202 VRIVEPLRRCMDRAREILEIKTGGLVVWTRGGIHFVYRGSSYLENAKRHRDFVNYNEEL- 260
Query: 1758 VPDVSSAN--------SNLITRTGDAVTASIATRTPVLADRTMTEEETEFNSVLDGLGPR 1603
V+S N S T T D A P+ T E E N +LD LGPR
Sbjct: 261 -SPVTSNNPTSQGKYWSKDETLTNDNDEADDKDDKPIKG----TLYEREVNRLLDSLGPR 315
Query: 1602 FHEWWGTGILPIDADLLPQTVPGFKTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFAL 1423
F +WW LP+DADLLP+ VP FKTPFR P G+R L + E+T LRK A+ LP HF L
Sbjct: 316 FIDWWWNTPLPVDADLLPEVVPDFKTPFRQCPPGVRPALADEELTYLRKHARPLPTHFVL 375
Query: 1422 GRNRNHQGLAAAIIKLWEKSMVAKIAVKRGIQNTNNELMAEELKKLTGGVLLLRNKYYIV 1243
GRN QGLAAAI+KLWEKS++AK+AVK GIQNTN+E MA LK+LTGG ++LRNK YI+
Sbjct: 376 GRNTKLQGLAAAILKLWEKSLIAKVAVKVGIQNTNHEQMARNLKRLTGGTVILRNKDYII 435
Query: 1242 IYRGKDFVPTSVATALVERQEMTKEMQDAEEKAR 1141
IYRGKDF+P VA +++ER+ + Q EE+AR
Sbjct: 436 IYRGKDFLPGGVAESVIERESQVHDQQAKEEEAR 469
Score = 162 bits (408), Expect = 2e-038
Identities = 91/258 (35%), Positives = 148/258 (57%), Gaps = 8/258 (3%)
Frame = -3
Query: 1131 VAERQEMTKDIQDAEEKVRYGVVEP----AAASVENGQVALAGSLAEFYEAQAQWGREKT 964
V ER+ D Q EE+ R + + S E V +F+++ A+ +T
Sbjct: 451 VIERESQVHDQQAKEEEARLKMADSLQMIVGLSSERSYVGTFREYQDFHDSHAR----RT 506
Query: 963 SEEHEMMLKEASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQETI 784
+E + + EA K ++ + +K E +L + K ++++ LAK+ SW P+ D+E +
Sbjct: 507 TENNFRIQLEAKKHRLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELL 566
Query: 783 TDEERVMFRRLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEETA 604
T+EER +FR++GL+M ++ LG RGVF+GVIE +H HWKH+E+VK+I+KQ + T+
Sbjct: 567 TEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQASQITYTS 626
Query: 603 RFLEYESGGILIDIVKVPKGYAIMYYRGKNYQRPISIRPRSLPSKARALKRWKALQRYEA 424
LE E+GG LI I + +AI+ YRGKNY+RP P +L +K AL+R +QR +
Sbjct: 627 MMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRSIEVQRRGS 686
Query: 423 LTEHVSELENTIKQMKAE 370
+ E + +I ++K E
Sbjct: 687 MKYFAQERKKSIDELKRE 704
>sp|Q9FYT6|CRS1_MAIZE Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic OS=Zea mays GN=CRS1 PE=1 SV=1
Length = 715
Score = 210 bits (534), Expect = 4e-053
Identities = 121/267 (45%), Positives = 165/267 (61%), Gaps = 4/267 (1%)
Frame = -3
Query: 1644 ETEFNSVLDGLGPRFHEWWGTGILPIDADLLPQTVPGFKTPFRLLPTGMRSRLTNAEMTN 1465
E E N +LD LGPRF +WW LP+DADLLP+ VPG KTP+RL P G+R L + E+T
Sbjct: 300 EREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGSKTPYRLCPPGVRPTLADEELTY 359
Query: 1464 LRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSMVAKIAVKRGIQNTNNELMAEELKKL 1285
LRKLA+ LP HFALGRN QGLAAAI+KLWEKS++AKIAVK GIQNTNNE MA LK L
Sbjct: 360 LRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMAWNLKHL 419
Query: 1284 TGGVLLLRNKYYIVIYRGKDFVPTSVATALVERQEMTKEMQDAEEKARNGVVAERQEMTK 1105
TGG ++LRNK +I++YRGKDF+P VA +++R+ + Q EE+AR V + +M
Sbjct: 420 TGGTVILRNKDFIILYRGKDFLPGGVAQTVIQREAQVHDEQVKEEEARLKAV-DSLQMVG 478
Query: 1104 DIQDAEEKVRYGVVEPAAASVENGQVALAGSLAEFYEAQAQWGREKTSEEHEMMLKEASK 925
++ + + + A + + ++ E EA+ ++ EK ++HE L +K
Sbjct: 479 ELSEESSLGTFREYQGFHAKFVHENTENSNTMIEL-EAE-KYRLEKELKDHEWKLSVLNK 536
Query: 924 TKVTRVVKKLEHKLFIAQSKRSKADKE 844
K+ R + L AD+E
Sbjct: 537 -KIERSNQALAKLHSSWSPSEQSADRE 562
Score = 169 bits (428), Expect = 8e-041
Identities = 92/252 (36%), Positives = 146/252 (57%)
Frame = -3
Query: 1131 VAERQEMTKDIQDAEEKVRYGVVEPAAASVENGQVALAGSLAEFYEAQAQWGREKTSEEH 952
V +R+ D Q EE+ R V+ E + + G+ E+ A++ E T +
Sbjct: 449 VIQREAQVHDEQVKEEEARLKAVDSLQMVGELSEESSLGTFREYQGFHAKFVHENTENSN 508
Query: 951 EMMLKEASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQETITDEE 772
M+ EA K ++ + +K E KL + K ++++ LAK+ SW P+ D+E +T+EE
Sbjct: 509 TMIELEAEKYRLEKELKDHEWKLSVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEE 568
Query: 771 RVMFRRLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEETARFLE 592
++MFRR+G +M + LG RG+FDGVIE +H HWKH+E+VK+I+KQ + A LE
Sbjct: 569 KIMFRRIGRKMDGLVLLGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLE 628
Query: 591 YESGGILIDIVKVPKGYAIMYYRGKNYQRPISIRPRSLPSKARALKRWKALQRYEALTEH 412
E+GGILI + K+ +AI+ YRGKNY+RP +L +K AL+R +QR ++
Sbjct: 629 VETGGILIAVEKLTTSHAIILYRGKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSMKYF 688
Query: 411 VSELENTIKQMK 376
V E + +I ++K
Sbjct: 689 VRERQKSILELK 700
Score = 64 bits (153), Expect = 7e-009
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Frame = -3
Query: 2193 DDEEDSVLPWEKEVEFQQEQDKGEVV----KKRTKAPTLAELTLEDSEXXXXXXXXXXXX 2026
+ E+ +PW +D+G V +K+ + PT AE LE E
Sbjct: 133 EKEKSRAVPW------AAARDEGLKVALRREKKPREPTRAETELETHELRRLRRLARGIG 186
Query: 2025 XXISIPKAGITGAVLDKIHDQWRK-SELVRLKFHEVLARDMKTAHEIVQRRTGGLVIWQS 1849
KAG+T V+ ++ +W EL ++ E L R M A EI++ +TGGLV+W
Sbjct: 187 RWARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTK 246
Query: 1848 GSVMMVYRGA---NNAGPSSRPRSNEKDGDALFVPDVS 1744
G + VYRG+ NA S +N DA D S
Sbjct: 247 GDMHFVYRGSKYQQNAKHSHTFLTNVHKDDAFQENDQS 284
>sp|Q9LF10|CRS1_ARATH Chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic OS=Arabidopsis thaliana GN=At5g16180 PE=3 SV=2
Length = 720
Score = 192 bits (487), Expect = 1e-047
Identities = 106/250 (42%), Positives = 152/250 (60%), Gaps = 2/250 (0%)
Frame = -3
Query: 1644 ETEFNSVLDGLGPRFHEWWGTGILPIDADLLPQTVPGFKTPFRLLPTGMRSRLTNAEMTN 1465
E E + +LDGLGPR+ +WW P+DADLLP+ V G+ TP R P R++LT+ E+T
Sbjct: 309 EREADRLLDGLGPRYMDWWMRRPFPVDADLLPEVVNGYMTPSRRCPPNTRAKLTDEELTY 368
Query: 1464 LRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSMVAKIAVKRGIQNTNNELMAEELKKL 1285
LR +A+ LP HF LGRN QGLA+AI+KLWEK ++AKIA+K G NTNNE MA+EL+ L
Sbjct: 369 LRNIAQPLPFHFVLGRNYGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEEMADELRYL 428
Query: 1284 TGGVLLLRNKYYIVIYRGKDFVPTSVATALVERQEMTKEMQDAEEKARNGVVAERQEMTK 1105
TGGVL+LRNKY IV+YRGKDF+ VA + +R+ + Q EE R + + +T
Sbjct: 429 TGGVLILRNKYLIVLYRGKDFLSDEVADLVEDRERLLSRYQHFEETKRESDIELLEVVTN 488
Query: 1104 DIQDAEEKVRYGVVEPAAASVENGQVALAGSLAEFYEAQAQWGREKTSEEHEMMLKEASK 925
Q E ++E + G++ E +A+ + +E S+EH++ + ++
Sbjct: 489 GKQLKETNKSGTLLEFQELQRKFGEMDPRNLETEAEKARLE--KELKSQEHKLSILKSKI 546
Query: 924 TKVTRVVKKL 895
K + KL
Sbjct: 547 EKSNMELFKL 556
Score = 166 bits (418), Expect = 1e-039
Identities = 101/258 (39%), Positives = 150/258 (58%), Gaps = 10/258 (3%)
Frame = -3
Query: 1134 VVAERQEMTKDIQDAEEKVRYGVVEPAAASVENG----QVALAGSLAEFYEAQAQWGREK 967
+V +R+ + Q EE R +E V NG + +G+L EF E Q ++G
Sbjct: 457 LVEDRERLLSRYQHFEETKRESDIE-LLEVVTNGKQLKETNKSGTLLEFQELQRKFG--- 512
Query: 966 TSEEHEMMLKEASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQET 787
+ + EA K ++ + +K EHKL I +SK K++ EL K+ W P+ +D E
Sbjct: 513 -EMDPRNLETEAEKARLEKELKSQEHKLSILKSKIEKSNMELFKLNSLWKPSEGDDDIEI 571
Query: 786 ITDEERVMFRRLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEET 607
+T+EER RR+GL+M L LG RGVF GV+E +H HWKHRE+ K+I+ QK V T
Sbjct: 572 LTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSRVVYT 631
Query: 606 ARFLEYESGGILIDIVKVPKGYAIMYYRGKNYQRPIS-IRPRSLPSKARALKRWKALQRY 430
A+ LE ES G+LI I K+ +G+AI+ YRGKNY+RP S + ++L +K +AL+R +QR
Sbjct: 632 AKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVVMQRL 691
Query: 429 EALTEHVSELENTIKQMK 376
+L + E I+ +K
Sbjct: 692 GSLKFFAYQRERAIEDLK 709
Score = 74 bits (181), Expect = 4e-012
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Frame = -3
Query: 2172 LPWEKEVE-FQQEQDKGEVVKKRTKAPTLAELTLEDSEXXXXXXXXXXXXXXISIPKAGI 1996
+PWE+E E F + K E V PT AEL L++ +++ KAG+
Sbjct: 180 MPWEREEERFILRRMKKESV------PTTAELILDEGLLNRLRREASKMRKWVNVRKAGV 233
Query: 1995 TGAVLDKIHDQWRKSELVRLKFHEVLARDMKTAHEIVQRRTGGLVIWQSGSVMMVYRGAN 1816
T V++KI W+ +EL ++F L R+M+ A EI++ +TGGLV+ ++VYRG
Sbjct: 234 TELVVNKIKSMWKLNELAMVRFDVPLCRNMERAQEIIEMKTGGLVVLSKKEFLVVYRG-- 291
Query: 1815 NAGPSSRPRSNEKDGDALF 1759
GPS ++ +L+
Sbjct: 292 --GPSYSSEGQDEISSSLY 308
>sp|Q67XL4|Y3544_ARATH Uncharacterized CRM domain-containing protein At3g25440,
chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1
Length = 444
Score = 99 bits (246), Expect = 1e-019
Identities = 59/180 (32%), Positives = 103/180 (57%), Gaps = 6/180 (3%)
Frame = -3
Query: 903 KKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQETITDEERVMFRRLGLRMKPYLP 724
+K+ +KL A+ K + + + K+ S A D E +T EE + ++GL+ K Y+P
Sbjct: 139 EKILNKLRKARKKEERLMETMKKLEPS-ESAETTHDPEILTPEEHFYYLKMGLKCKNYVP 197
Query: 723 LGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEETARFLEYESGGILIDIVKVPKG 544
+G RG++ GVI NMHLHWK + ++++ K + V+E A L +GGI++D V +G
Sbjct: 198 VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLD---VHEG 254
Query: 543 YAIMYYRGKNYQRPIS--IRPRSLPSKARALKRWKALQRYEALTEHVSELENTIKQMKAE 370
I+ YRGKNY +P + + PR + +AL + K A+ +++ LE ++ ++A+
Sbjct: 255 NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ 314
Database: Uniprot/SwissProt
Posted date: Thu Sep 27 17:53:50 2012
Number of letters in database: 190,795,139
Number of sequences in database: 537,505
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,182,733,701
Number of Sequences: 537505
Number of Extensions: 88182733701
Number of Successful Extensions: 515073019
Number of sequences better than 0.0: 0
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