Arabidopsis blast output of UN58992
BLASTX 7.6.2
Query= UN58992 /QuerySize=2520
(2519 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G18390.1 | Symbols: EMB1865 | EMB1865 (embryo ... 494 1e-139
TAIR9_protein||AT3G23070.1 | Symbols: | RNA binding | chr3:8203... 466 3e-131
TAIR9_protein||AT4G14510.1 | Symbols: | RNA binding | chr4:8337... 268 2e-071
TAIR9_protein||AT3G01370.1 | Symbols: ATCFM2, CFM2 | ATCFM2 (CRM... 210 5e-054
TAIR9_protein||AT4G29750.1 | Symbols: | RNA binding | chr4:1456... 198 2e-050
TAIR9_protein||AT5G16180.1 | Symbols: CRS1, ATCRS1 | CRS1 (ARABI... 192 1e-048
TAIR9_protein||AT4G13070.1 | Symbols: | group II intron splicin... 101 3e-021
TAIR9_protein||AT3G25440.1 | Symbols: | RNA binding | chr3:9223... 99 9e-021
TAIR9_protein||AT3G25440.2 | Symbols: | RNA binding | chr3:9224... 99 9e-021
TAIR9_protein||AT3G27550.1 | Symbols: | group II intron splicin... 98 2e-020
TAIR9_protein||AT2G28480.1 | Symbols: | RNA binding | chr2:1217... 92 2e-018
>TAIR9_protein||AT3G18390.1 | Symbols: EMB1865 | EMB1865 (embryo defective
1865); RNA binding | chr3:6313572-6317584 FORWARD
Length = 849
Score = 494 bits (1271), Expect = 1e-139
Identities = 257/427 (60%), Positives = 314/427 (73%), Gaps = 21/427 (4%)
Frame = -3
Query: 2358 AIDRIVLRLRNXXXXXXXXXXXXXXXXXXF------VMRGDEKLGELLRRDWVRPDRMLI 2197
AI+RIVLRLRN + G+E+LG+LL+R+WVRPD ML
Sbjct: 133 AIERIVLRLRNLGLGSDDEDDVEDDEGGGINGGDVKPVTGEERLGDLLKREWVRPDMMLA 192
Query: 2196 D----DDEEDSVLPWEKEVEFQ-QEQDKGE-----VVKKRTKAPTLAELTLEDSEXXXXX 2047
+ ++E++ +LPWEK E Q E+ GE + K+R +AP+LAELT+EDSE
Sbjct: 193 EGEESEEEDEVLLPWEKNEEEQAAERVVGEGGVAVMQKRRARAPSLAELTVEDSELRRLR 252
Query: 2046 XXXXXXXXXISIPKAGITGAVLDKIHDQWRKSELVRLKFHEVLARDMKTAHEIVQRRTGG 1867
I+IPKAG+T AV++KI+D WRK ELVRLKFHEVLARDMKTAHEIV+RRTGG
Sbjct: 253 RDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVLARDMKTAHEIVERRTGG 312
Query: 1866 LVIWQSGSVMMVYRGANNAGPSSRPRSNEKDGDALFVPDVSSANSNLITRTGDAVTASIA 1687
+VIW++GSVM+VYRG + GP + LFVPDVSSA T D +A +
Sbjct: 313 MVIWRAGSVMVVYRGLDYKGPPVISNQMAGPKETLFVPDVSSAGDE-ATNAKDNQSAPLV 371
Query: 1686 TRTPVLAD----RTMTEEETEFNSVLDGLGPRFHEWWGTGILPIDADLLPQTVPGFKTPF 1519
+ P++ + MTEEE EFNS+LD LGPRF EWWGTG+LP+DADLLP T+PG+KTPF
Sbjct: 372 IKDPIIKNPIRKENMTEEEVEFNSLLDSLGPRFQEWWGTGVLPVDADLLPPTIPGYKTPF 431
Query: 1518 RLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSMVAKIAVK 1339
RLLPTGMRS LTNAEMTNLRK+ K+LPCHFALGRNRNHQGLAAAI+++WEKS++AKIAVK
Sbjct: 432 RLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAAAILQIWEKSLIAKIAVK 491
Query: 1338 RGIQNTNNELMAEELKKLTGGVLLLRNKYYIVIYRGKDFVPTSVATALVERQEMTKEMQD 1159
RGIQNTNN+LMA+E+K LTGGVLLLRNKYYIVIYRGKDF+P+SVA L ERQE+TKE+QD
Sbjct: 492 RGIQNTNNKLMADEVKTLTGGVLLLRNKYYIVIYRGKDFLPSSVAATLAERQELTKEIQD 551
Query: 1158 AEEKARN 1138
EE+ RN
Sbjct: 552 VEERVRN 558
Score = 326 bits (835), Expect = 4e-089
Identities = 166/269 (61%), Positives = 213/269 (79%), Gaps = 6/269 (2%)
Frame = -3
Query: 1131 VAERQEMTKDIQDAEEKVRYGVVEPAAASVENGQVALAGSLAEFYEAQAQWGREKTSEEH 952
+AERQE+TK+IQD EE+VR +E A V + A AG+LAEFYEAQA+WG+E T +
Sbjct: 539 LAERQELTKEIQDVEERVRNREIE-AVQPVGDKVPAEAGTLAEFYEAQARWGKEITPDHR 597
Query: 951 EMMLKEASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQETITDEE 772
E M++EAS+ RVVK+++HKL +AQSK +A+K L+KI S +P G DQE I++EE
Sbjct: 598 EKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVISEEE 657
Query: 771 RVMFRRLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEETARFLE 592
R MFR++GL+MK YLP+GIRGVFDGVIENMHLHWKHRELVKLISKQK+ FVEETAR LE
Sbjct: 658 RAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAFVEETARLLE 717
Query: 591 YESGGILIDIVKVPKGYAIMYYRGKNYQRPISIRPRSLPSKARALKRWKALQRYEALTEH 412
YESGG+L+ I KVPKG+A++YYRGKNY+RPIS+RPR+L +KA+ALKR A+QR+EAL++H
Sbjct: 718 YESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQH 777
Query: 411 VSELENTIKQMKAE-----NGEDESSWMN 340
+SELE TI+QM+++ ES W N
Sbjct: 778 ISELERTIEQMQSQLTSKNPSYSESEWEN 806
>TAIR9_protein||AT3G23070.1 | Symbols: | RNA binding | chr3:8203548-8207243
FORWARD
Length = 882
Score = 466 bits (1199), Expect = 3e-131
Identities = 262/613 (42%), Positives = 379/613 (61%), Gaps = 31/613 (5%)
Frame = -3
Query: 2181 DSVLPWEKEVEFQQEQDKGEVVKKRTKAPTLAELTLEDSEXXXXXXXXXXXXXXISIPKA 2002
D PWEK ++++ + E K+ +LAE+TL +SE + I
Sbjct: 186 DVGFPWEKMSAKEKKELEAEWTAKKENRYSLAEMTLPESELRRLRNLTFRTASKMRIRGG 245
Query: 2001 GITGAVLDKIHDQWRKSELVRLKFHEVLARDMKTAHEIVQRRTGGLVIWQSGSVMMVYRG 1822
G+T +D I ++W+ +E+VRLK A +M+ HEI++++TGGLVIW+SG+ + +YRG
Sbjct: 246 GVTQVAVDAIKEKWKSAEIVRLKIEGASALNMRKMHEILEKKTGGLVIWRSGTSISLYRG 305
Query: 1821 ANNAGPS---SRPRSNEKDGDALFVPDVSSANSNLITRTGDAV---TASIATRTPVLADR 1660
+ PS ++ R E +A V + + ++ ++ + V T + D+
Sbjct: 306 VSYELPSGKWNKQRREETPPEA--VIENHDETTTMVDKSDEKVHLPQLEQETTSVEKKDQ 363
Query: 1659 T--MTEEETEFNSVLDGLGPRFHEWWGTGILPIDADLLPQTVPGFKTPFRLLPTGMRSRL 1486
T + E E E + +LD LGPRF +W G LP+DADLLP +P ++ PFR+LP G+RS L
Sbjct: 364 TSPVVEYEDELDELLDDLGPRFMDWPGDNPLPVDADLLPGAIPDYEPPFRVLPYGVRSSL 423
Query: 1485 TNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSMVAKIAVKRGIQNTNNELM 1306
E T LR+LA+S+P HFALGR+R QGLA A+++LWEKSM+AKIA+KRG+Q+T +E M
Sbjct: 424 GPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQSTTSERM 483
Query: 1305 AEELKKLTGGVLLLRNKYYIVIYRGKDFVPTSVATALVERQEMTKEMQDAEEKARNGVVA 1126
AE+LKKLTGG++L RNK ++V YRGK+F+ VA ALVE++ + +QD EE+AR
Sbjct: 484 AEDLKKLTGGIMLSRNKDFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQAR----- 538
Query: 1125 ERQEMTKDIQDAEEKVRYGVVEPAAASVENGQVALAGSLAEFYEAQAQWGREKTSEEHEM 946
+ EPA ++ AG+L E +A +WG+ ++H
Sbjct: 539 ---------LRGSSALIVPSTEPA------NKLVSAGTLGETLDATGKWGKNLDDDDHSD 583
Query: 945 MLK-EASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQETITDEER 769
+K E + +V+KLE KL A+ K KA++ LAK+ PA ED E+ITDEER
Sbjct: 584 EVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDEER 643
Query: 768 VMFRRLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEETARFLEY 589
MFR+LGL+MK +L LG RGVFDG +ENMHLHWK+RELVK+I K K + V++ A LE
Sbjct: 644 FMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEA 703
Query: 588 ESGGILIDIVKVPKGYAIMYYRGKNYQRPISIRPRSLPSKARALKRWKALQRYEALTEHV 409
ESGGIL+ I KV KGYAI+ YRG++Y+RP +RP++L +K +AL R LQR E L +H+
Sbjct: 704 ESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHI 763
Query: 408 SELENTIKQMKAE 370
S ++ KQ++AE
Sbjct: 764 STMQAKAKQLRAE 776
>TAIR9_protein||AT4G14510.1 | Symbols: | RNA binding | chr4:8337390-8341057
REVERSE
Length = 933
Score = 268 bits (683), Expect = 2e-071
Identities = 139/318 (43%), Positives = 212/318 (66%), Gaps = 12/318 (3%)
Frame = -3
Query: 1293 KKLTGGVLLLRNKYYIVIYRGKDFVPTSVATALVERQEMTKEMQDAEEKARNGV------ 1132
K+LTGG+LL RNK ++V YRGK F+ V AL+E++ + + +QD EE+AR
Sbjct: 513 KRLTGGMLLSRNKDFLVFYRGKSFLSLEVGEALMEKEMLVRTLQDEEEQARLRASSALVV 572
Query: 1131 --VAERQEMTKDIQDAEEKVR-YGVVEPAAASVENGQVALAGSLAEFYEAQAQWGREKTS 961
+ Q++ + +QD EE+ R +V P+ + +N + AG+L E +A +WG+ +
Sbjct: 573 PSIKANQQLARTLQDKEEQARPSALVLPSTKANQN--LVSAGTLGETLDATGKWGKNLDN 630
Query: 960 EEH-EMMLKEASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQETI 784
++H E M +E K + ++V+KLE KL A+ K KA++ LAK+ ES PA D E I
Sbjct: 631 DDHVEEMKQEVEKVRSAKLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLEGI 690
Query: 783 TDEERVMFRRLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEETA 604
T+EER MF++LGL+MK +L LG RGVFDG +ENMHLHWK+REL+K++ K K +E ++ A
Sbjct: 691 TEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKVA 750
Query: 603 RFLEYESGGILIDIVKVPKGYAIMYYRGKNYQRPISIRPRSLPSKARALKRWKALQRYEA 424
LE ESGGIL+ + K+ KGYA++ YRGK+Y+RP ++RP++L +K +AL R LQ+ EA
Sbjct: 751 MALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLELQKREA 810
Query: 423 LTEHVSELENTIKQMKAE 370
L +H+ ++ +Q++AE
Sbjct: 811 LIKHIEAIQTRSEQLRAE 828
Score = 222 bits (565), Expect = 9e-058
Identities = 127/318 (39%), Positives = 189/318 (59%), Gaps = 14/318 (4%)
Frame = -3
Query: 2169 PWEKEVEFQ-QEQDKGEVVKKRTKAPTLAELTLEDSEXXXXXXXXXXXXXXISIPKAGIT 1993
PWEK + +E GE K+ +LAE+TL + E + + AG+T
Sbjct: 190 PWEKVSSMEKKELVNGEWTAKKESRYSLAEMTLSEFELNRLRNVMFRTKSKMRVTGAGVT 249
Query: 1992 GAVLDKIHDQWRKSELVRLKFHEVLARDMKTAHEIVQRRTGGLVIWQSGSVMMVYR---G 1822
AV+D I ++W+ SE+VRLK A +M+ HEI++R+TGGLVIW+SG+ + +Y G
Sbjct: 250 QAVVDAIQEKWKGSEIVRLKIEGSSALNMRRMHEILERKTGGLVIWRSGTSIALYNYKGG 309
Query: 1821 ANNAGPSSRPRSNEKDGDALFVPDVSSANSNLITRTGDAVTASIATRTPVLA---DRTMT 1651
+N G + + + + L SS ++ + ++ V + P + DRT
Sbjct: 310 SNRDGSGNMNKQVYRRAERL----PSSLPTSTVDQSVQLVNLPQLEKEPTVVGNKDRTSP 365
Query: 1650 EE---ETEFNSVLDGLGPRFHEWWGTGILPIDADLLPQTVPGFKTPFRLLPTGMRSRLTN 1480
+E E E N +L+GLGPR+ +W G LP+DADLLP VPG++ PFR LP G+RS L
Sbjct: 366 QEVEYEDEINELLEGLGPRYTDWQGGYPLPVDADLLPGIVPGYEPPFRALPYGVRSTLGT 425
Query: 1479 AEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSMVAKIAVKRGIQNTNNELMAE 1300
E T+LR++A LP HFALGR+R QGLA A++KLW+KS++AK+A+KRG+Q T +E MAE
Sbjct: 426 KEATSLRRIATVLPPHFALGRSRQLQGLATAMVKLWQKSLIAKVALKRGVQLTTSERMAE 485
Query: 1299 ELKKLTGGVLLLRNKYYI 1246
++K + + N +YI
Sbjct: 486 DIKVIRFHSRVTFNCFYI 503
>TAIR9_protein||AT3G01370.1 | Symbols: ATCFM2, CFM2 | ATCFM2 (CRM FAMILY MEMBER
2); RNA binding | chr3:139033-143477 FORWARD
Length = 1012
Score = 210 bits (533), Expect = 5e-054
Identities = 98/161 (60%), Positives = 129/161 (80%)
Frame = -3
Query: 1638 EFNSVLDGLGPRFHEWWGTGILPIDADLLPQTVPGFKTPFRLLPTGMRSRLTNAEMTNLR 1459
E + +L+GLGPRF +WW LP+D DLLP VP ++ PFRLLP G+ +LT+ EMT +R
Sbjct: 328 EADRLLEGLGPRFTDWWAYDPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIR 387
Query: 1458 KLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSMVAKIAVKRGIQNTNNELMAEELKKLTG 1279
+L + LPCHFALGRNRN QGLA AI+KLWEK +AKIAVKRG+QNTN+ELMAEELK LTG
Sbjct: 388 RLGRPLPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTG 447
Query: 1278 GVLLLRNKYYIVIYRGKDFVPTSVATALVERQEMTKEMQDA 1156
G L+ R+K +IV+YRGKDF+P++V++A+ ER+ T M+++
Sbjct: 448 GTLISRDKDFIVLYRGKDFLPSAVSSAIEERRRQTMIMENS 488
Score = 178 bits (450), Expect = 2e-044
Identities = 93/204 (45%), Positives = 133/204 (65%), Gaps = 2/204 (0%)
Frame = -3
Query: 960 EEHEMMLKEASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQETIT 781
+ H+M K + +++K KL +A K++ A+K LA + P + D+E IT
Sbjct: 523 QTHQM--KSRQRNSPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDKEGIT 580
Query: 780 DEERVMFRRLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEETAR 601
++E+ M R++GL+MKP+L LG RGVFDG IENMHLHWK+RELVK+I + IE + A
Sbjct: 581 NDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAE 640
Query: 600 FLEYESGGILIDIVKVPKGYAIMYYRGKNYQRPISIRPRSLPSKARALKRWKALQRYEAL 421
LE ESGGIL+ + V KGYAI+ YRGKNY+RP +RP++L SK ALKR QR ++L
Sbjct: 641 ILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSL 700
Query: 420 TEHVSELENTIKQMKAENGEDESS 349
HV +L N I+++ + ED ++
Sbjct: 701 KLHVLKLSNNIEELNRQLVEDSAT 724
Score = 89 bits (219), Expect = 1e-017
Identities = 41/104 (39%), Positives = 65/104 (62%)
Frame = -3
Query: 2115 KKRTKAPTLAELTLEDSEXXXXXXXXXXXXXXISIPKAGITGAVLDKIHDQWRKSELVRL 1936
KK K P+LAELTL +E + I KAGIT +++ IH++WR +E+V++
Sbjct: 153 KKEEKVPSLAELTLPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVKI 212
Query: 1935 KFHEVLARDMKTAHEIVQRRTGGLVIWQSGSVMMVYRGANNAGP 1804
++ +MK H++++ +TGGLVIW+SGS +++YRG N P
Sbjct: 213 FCEDISRMNMKRTHDVLETKTGGLVIWRSGSKILLYRGVNYQYP 256
>TAIR9_protein||AT4G29750.1 | Symbols: | RNA binding | chr4:14569728-14572804
FORWARD
Length = 777
Score = 198 bits (502), Expect = 2e-050
Identities = 108/262 (41%), Positives = 164/262 (62%), Gaps = 4/262 (1%)
Frame = -3
Query: 1131 VAERQ-EMTKDIQDAEEKVRYGVVEPAAASVENGQ---VALAGSLAEFYEAQAQWGREKT 964
+ ERQ E+T+ +Q E++ R A + + LAG+LAE A ++W +
Sbjct: 486 LTERQKEITEVLQAKEDQAREMASTRATLTSQAKSPKTQLLAGTLAETIAASSRWAPNAS 545
Query: 963 SEEHEMMLKEASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQETI 784
S + E + +E++ K +++ LE +L + K +A+++LAK+++ P+ P D E I
Sbjct: 546 SVDIEELKRESASIKRAALIRDLELRLLYGKQKLRRAERDLAKVQKDLDPSELPTDSEII 605
Query: 783 TDEERVMFRRLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEETA 604
T+EER+++R++GL M P+L LG R V+DG IENMHLHWKHRELVK+I + K + V+ A
Sbjct: 606 TEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQVKHIA 665
Query: 603 RFLEYESGGILIDIVKVPKGYAIMYYRGKNYQRPISIRPRSLPSKARALKRWKALQRYEA 424
LE ESGG+L+ + K KGYAI+ YRGKNYQ P +RP +L ++ +A R LQR EA
Sbjct: 666 ISLEAESGGVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNLLTRKKAFARSIELQRREA 725
Query: 423 LTEHVSELENTIKQMKAENGED 358
L HV++LE I+ +K +D
Sbjct: 726 LKYHVADLEERIELLKTGQDDD 747
Score = 191 bits (483), Expect = 3e-048
Identities = 114/263 (43%), Positives = 157/263 (59%), Gaps = 12/263 (4%)
Frame = -3
Query: 1677 PVLADRTMTEEETEFNSVLDGLGPRFHEWWGTGILPIDADLLPQTVPGFKTPFRLLPTGM 1498
P + E E N +LD +GPRFH+W G P+DADLLP V G++ PFR+LP G+
Sbjct: 334 PKNVPKEQLSELCELNDLLDEVGPRFHDWTGCAPFPVDADLLPGYVEGYRCPFRILPQGV 393
Query: 1497 RSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSMVAKIAVKRGIQNTN 1318
+ L+N EMT +R+LA++ P HFALGR+R QGLA A++KLW KS +AKIA+KRG++NT
Sbjct: 394 KPCLSNTEMTEMRRLARTSPPHFALGRSRELQGLAKAMVKLWAKSAIAKIAIKRGVENTR 453
Query: 1317 NELMAEELKKLTGGVLLLRNKYYIVIYRGKDFVPTSVATALVERQ-EMTKEMQDAEEKAR 1141
NE MAEELK+LT GVL+ RNK YIV YR VA AL ERQ E+T+ +Q E++AR
Sbjct: 454 NERMAEELKRLTRGVLVSRNKEYIVFYR--------VAEALTERQKEITEVLQAKEDQAR 505
Query: 1140 NGVVAERQEMTKDIQDAEEKVRYG-VVEPAAASVENGQVALAGSLAEFYEAQAQWGREKT 964
+ + R +T + + ++ G + E AAS A + + E A R
Sbjct: 506 E-MASTRATLTSQAKSPKTQLLAGTLAETIAASSRWAPNASSVDIEELKRESASIKRAAL 564
Query: 963 SEEHEMMLKEASKTKVTRVVKKL 895
+ E+ L K K+ R + L
Sbjct: 565 IRDLELRLL-YGKQKLRRAERDL 586
>TAIR9_protein||AT5G16180.1 | Symbols: CRS1, ATCRS1 | CRS1 (ARABIDOPSIS ORTHOLOG
OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1); RNA splicing factor,
transesterification mechanism | chr5:5279884-5282898 FORWARD
Length = 721
Score = 192 bits (487), Expect = 1e-048
Identities = 106/250 (42%), Positives = 152/250 (60%), Gaps = 2/250 (0%)
Frame = -3
Query: 1644 ETEFNSVLDGLGPRFHEWWGTGILPIDADLLPQTVPGFKTPFRLLPTGMRSRLTNAEMTN 1465
E E + +LDGLGPR+ +WW P+DADLLP+ V G+ TP R P R++LT+ E+T
Sbjct: 309 EREADRLLDGLGPRYMDWWMRRPFPVDADLLPEVVNGYMTPSRRCPPNTRAKLTDEELTY 368
Query: 1464 LRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSMVAKIAVKRGIQNTNNELMAEELKKL 1285
LR +A+ LP HF LGRN QGLA+AI+KLWEK ++AKIA+K G NTNNE MA+EL+ L
Sbjct: 369 LRNIAQPLPFHFVLGRNYGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEEMADELRYL 428
Query: 1284 TGGVLLLRNKYYIVIYRGKDFVPTSVATALVERQEMTKEMQDAEEKARNGVVAERQEMTK 1105
TGGVL+LRNKY IV+YRGKDF+ VA + +R+ + Q EE R + + +T
Sbjct: 429 TGGVLILRNKYLIVLYRGKDFLSDEVADLVEDRERLLSRYQHFEETKRESDIELLEVVTN 488
Query: 1104 DIQDAEEKVRYGVVEPAAASVENGQVALAGSLAEFYEAQAQWGREKTSEEHEMMLKEASK 925
Q E ++E + G++ E +A+ + +E S+EH++ + ++
Sbjct: 489 GKQLKETNKSGTLLEFQELQRKFGEMDPRNLETEAEKARLE--KELKSQEHKLSILKSKI 546
Query: 924 TKVTRVVKKL 895
K + KL
Sbjct: 547 EKSNMELFKL 556
Score = 166 bits (418), Expect = 1e-040
Identities = 101/258 (39%), Positives = 150/258 (58%), Gaps = 10/258 (3%)
Frame = -3
Query: 1134 VVAERQEMTKDIQDAEEKVRYGVVEPAAASVENG----QVALAGSLAEFYEAQAQWGREK 967
+V +R+ + Q EE R +E V NG + +G+L EF E Q ++G
Sbjct: 457 LVEDRERLLSRYQHFEETKRESDIE-LLEVVTNGKQLKETNKSGTLLEFQELQRKFG--- 512
Query: 966 TSEEHEMMLKEASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQET 787
+ + EA K ++ + +K EHKL I +SK K++ EL K+ W P+ +D E
Sbjct: 513 -EMDPRNLETEAEKARLEKELKSQEHKLSILKSKIEKSNMELFKLNSLWKPSEGDDDIEI 571
Query: 786 ITDEERVMFRRLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEET 607
+T+EER RR+GL+M L LG RGVF GV+E +H HWKHRE+ K+I+ QK V T
Sbjct: 572 LTNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSRVVYT 631
Query: 606 ARFLEYESGGILIDIVKVPKGYAIMYYRGKNYQRPIS-IRPRSLPSKARALKRWKALQRY 430
A+ LE ES G+LI I K+ +G+AI+ YRGKNY+RP S + ++L +K +AL+R +QR
Sbjct: 632 AKALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVVMQRL 691
Query: 429 EALTEHVSELENTIKQMK 376
+L + E I+ +K
Sbjct: 692 GSLKFFAYQRERAIEDLK 709
Score = 74 bits (181), Expect = 3e-013
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Frame = -3
Query: 2172 LPWEKEVE-FQQEQDKGEVVKKRTKAPTLAELTLEDSEXXXXXXXXXXXXXXISIPKAGI 1996
+PWE+E E F + K E V PT AEL L++ +++ KAG+
Sbjct: 180 MPWEREEERFILRRMKKESV------PTTAELILDEGLLNRLRREASKMRKWVNVRKAGV 233
Query: 1995 TGAVLDKIHDQWRKSELVRLKFHEVLARDMKTAHEIVQRRTGGLVIWQSGSVMMVYRGAN 1816
T V++KI W+ +EL ++F L R+M+ A EI++ +TGGLV+ ++VYRG
Sbjct: 234 TELVVNKIKSMWKLNELAMVRFDVPLCRNMERAQEIIEMKTGGLVVLSKKEFLVVYRG-- 291
Query: 1815 NAGPSSRPRSNEKDGDALF 1759
GPS ++ +L+
Sbjct: 292 --GPSYSSEGQDEISSSLY 308
>TAIR9_protein||AT4G13070.1 | Symbols: | group II intron splicing factor
CRS1-related | chr4:7621780-7623051 REVERSE
Length = 344
Score = 101 bits (250), Expect = 3e-021
Identities = 72/214 (33%), Positives = 111/214 (51%), Gaps = 19/214 (8%)
Frame = -3
Query: 990 QAQWGREKTSEEHEM------MLKEASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIR 829
+ +W R K S + ++ LK K ++ +KL A+ K ++L K
Sbjct: 109 EKKWKRAKLSRKAKVNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLIEKLRKYD 168
Query: 828 ESWLPAGAPEDQETITDEERVMFRRLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVK 649
PA P D E++T+EE+ +R G + K ++ +G RGVF GV+ N+HLHWK E VK
Sbjct: 169 VPKSPA-EPYDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVK 227
Query: 648 LISKQ-----KDIEFVEETARFLEYESGGILIDIVKVPKGYAIMYYRGKNYQRPISIRPR 484
+I K + E+ EE AR S GI+ID V I+ YRGKNY RP + P
Sbjct: 228 VICKPCNKPGQVHEYAEELARL----SKGIVID---VKPNNTIVLYRGKNYVRPEVMSPV 280
Query: 483 SLPSKARALKRWKALQRYEALTEHVSELENTIKQ 382
SK +AL++++ Q E +E + +LE +++
Sbjct: 281 DTLSKDKALEKYRYEQSLEHTSEFIEKLEKELEE 314
>TAIR9_protein||AT3G25440.1 | Symbols: | RNA binding | chr3:9223998-9225505
FORWARD
Length = 445
Score = 99 bits (246), Expect = 9e-021
Identities = 59/180 (32%), Positives = 103/180 (57%), Gaps = 6/180 (3%)
Frame = -3
Query: 903 KKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQETITDEERVMFRRLGLRMKPYLP 724
+K+ +KL A+ K + + + K+ S A D E +T EE + ++GL+ K Y+P
Sbjct: 139 EKILNKLRKARKKEERLMETMKKLEPS-ESAETTHDPEILTPEEHFYYLKMGLKCKNYVP 197
Query: 723 LGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEETARFLEYESGGILIDIVKVPKG 544
+G RG++ GVI NMHLHWK + ++++ K + V+E A L +GGI++D V +G
Sbjct: 198 VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLD---VHEG 254
Query: 543 YAIMYYRGKNYQRPIS--IRPRSLPSKARALKRWKALQRYEALTEHVSELENTIKQMKAE 370
I+ YRGKNY +P + + PR + +AL + K A+ +++ LE ++ ++A+
Sbjct: 255 NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ 314
>TAIR9_protein||AT3G25440.2 | Symbols: | RNA binding | chr3:9224294-9225505
FORWARD
Length = 381
Score = 99 bits (246), Expect = 9e-021
Identities = 59/180 (32%), Positives = 103/180 (57%), Gaps = 6/180 (3%)
Frame = -3
Query: 903 KKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQETITDEERVMFRRLGLRMKPYLP 724
+K+ +KL A+ K + + + K+ S A D E +T EE + ++GL+ K Y+P
Sbjct: 75 EKILNKLRKARKKEERLMETMKKLEPS-ESAETTHDPEILTPEEHFYYLKMGLKCKNYVP 133
Query: 723 LGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEETARFLEYESGGILIDIVKVPKG 544
+G RG++ GVI NMHLHWK + ++++ K + V+E A L +GGI++D V +G
Sbjct: 134 VGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLD---VHEG 190
Query: 543 YAIMYYRGKNYQRPIS--IRPRSLPSKARALKRWKALQRYEALTEHVSELENTIKQMKAE 370
I+ YRGKNY +P + + PR + +AL + K A+ +++ LE ++ ++A+
Sbjct: 191 NTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQ 250
>TAIR9_protein||AT3G27550.1 | Symbols: | group II intron splicing factor
CRS1-related | chr3:10208010-10209899 REVERSE
Length = 492
Score = 98 bits (243), Expect = 2e-020
Identities = 62/213 (29%), Positives = 116/213 (54%), Gaps = 5/213 (2%)
Frame = -3
Query: 996 EAQAQWGREKTSEEHEMMLKEASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIRESWL 817
+ +++ +E E+ + K K+ ++L + L A+ K + ++L K L
Sbjct: 23 KVESRMRKESGKTLREIRRAKKLKKKLMTDEERLIYNLKRAKKKVALLLQKLKKYDLPEL 82
Query: 816 PAGAPEDQETITDEERVMFRRLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISK 637
P+ D E T E+ F+++G + K Y+P+G+RGVF GV++NMH+HWK E V++
Sbjct: 83 PSPV-HDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCD 141
Query: 636 QKDIEFVEETARFLEYESGGILIDIVKVPKGYAIMYYRGKNYQRPISIRPRSLPSKARAL 457
E ++E A + SGG++I+I V I+ +RG+NY++P ++ P + +K +AL
Sbjct: 142 NFPKEKIKEMASMIARLSGGVVINIHNVK---TIIMFRGRNYRQPKNLIPVNTLTKRKAL 198
Query: 456 KRWKALQRYEALTEHVSELENTIKQMKAENGED 358
+ + Q E+ ++ + E +++M N ED
Sbjct: 199 FKARFEQALESQKLNIKKTEQQLRRM-GVNPED 230
>TAIR9_protein||AT2G28480.1 | Symbols: | RNA binding | chr2:12176642-12178031
REVERSE
Length = 373
Score = 92 bits (226), Expect = 2e-018
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Frame = -3
Query: 936 EASKTKVTRVVKKLEHKLFIAQSKRSKADKELAKIRESWLPAGAPEDQETITDEERVMFR 757
+ K K +++++KL A+ K + + L + + + E IT EER +
Sbjct: 115 KGKKKKFVNAEERIKYKLEKAKIKEALLIERLKRYEVAKVQGPEVRPHE-ITGEERFYLK 173
Query: 756 RLGLRMKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKDIEFVEETARFLEYESGG 577
++G + Y+P+G RGVF GVI NMHLHWK E VK+I V++ A L SGG
Sbjct: 174 KMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGG 233
Query: 576 ILIDIVKVPKGYAIMYYRGKNYQRPISIRPRSLPSKARALKRWKALQRYEALTEHVSELE 397
+ ++I+ I++YRGK Y +P + P SK RA ++ K Q E++ ++ E
Sbjct: 234 VPVNII---GDDTIIFYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSLESVRHFIAIAE 290
Query: 396 NTIK 385
++
Sbjct: 291 KELE 294
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,844,648,944
Number of Sequences: 33410
Number of Extensions: 11844648944
Number of Successful Extensions: 494071052
Number of sequences better than 0.0: 0
|