Chrysanthenum transcriptome database

SwissProt blast output of UN56509


BLASTX 7.6.2

Query= UN56509 /QuerySize=1326
        (1325 letters)

Database: Uniprot/SwissProt;
          537,505 sequences; 190,795,139 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q9LQM3|C3H12_ARATH Zinc finger CCCH domain-containing protein...    357   1e-097
sp|Q84UQ3|C3H56_ORYSJ Zinc finger CCCH domain-containing protein...    228   1e-058
sp|Q9LT81|C3H39_ARATH Zinc finger CCCH domain-containing protein...    103   3e-021
sp|Q5PP65|C3H28_ARATH Zinc finger CCCH domain-containing protein...     98   1e-019
sp|Q6L5G1|C3H39_ORYSJ Zinc finger CCCH domain-containing protein...     55   8e-007
sp|A2ZVY5|C3H9_ORYSJ Zinc finger CCCH domain-containing protein ...     54   3e-006

>sp|Q9LQM3|C3H12_ARATH Zinc finger CCCH domain-containing protein 12
        OS=Arabidopsis thaliana GN=At1g32360 PE=2 SV=1

          Length = 384

 Score =  357 bits (916), Expect = 1e-097
 Identities = 204/411 (49%), Positives = 231/411 (56%), Gaps = 62/411 (15%)
 Frame = -3

Query: 1227 RESGNVVQIVTGGSKSGGDYW----GDQPVWATEDEYG-VWDREASVDNNSNSNYDGRQS 1063
            R+SG  V  V   +    D W    GD  VWATED+Y   W    + DN S  N      
Sbjct:    6 RDSGGDVVHVIPTNNPPPDNWFPNLGDSAVWATEDDYNRAW--AMNPDNTSGDN------ 57

Query: 1062 QTRSGSETPNKKRNGQGGDAQAT------SRSKAIGKMFFKTKLCCKFRAGTCPYITNCN 901
                 +  PNKK  G    + AT      +R+KAIGKMFFKTKLCCKFRAGTCPYITNCN
Sbjct:   58 -----NGPPNKKTRGSPSSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCN 112

Query:  900 FAHSIEELRRPPPNWQEIVAAHEEER---------GVTSEPREEFQIPSLGSSSFTVDSQ 748
            FAH++EELRRPPPNWQEIVAAHEEER          V   PREEFQIPSL SS  T +S 
Sbjct:  113 FAHTVEELRRPPPNWQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSS--TAESG 170

Query:  747 RSYKGRHCKKFYTEEGCPYGDNCTFLHDEQSKARESVVISLXXXXXXXXXXXXXXXXXXX 568
            RS+KGRHCKKFYTEEGCPYG++CTFLHDE S+ RESV ISL                   
Sbjct:  171 RSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVG 230

Query:  567 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSLLKPSNWKTRICNKWEQTGYCPFG 388
                                                +LKPSNWKTRICNKWE TGYCPFG
Sbjct:  231 GGGSSSNVVVLGGGGGSGSGSGI------------QILKPSNWKTRICNKWEITGYCPFG 278

Query:  387 SKCHFAHGAAELHRYGGGLVDIDAKDSPTSMDPNKQGMMPSKTPIETIVAAGPSAAHS-- 214
            +KCHFAHGAAELHR+GGGLV+ + KD  +     KQ +   K   +T     P   H+  
Sbjct:  279 AKCHFAHGAAELHRFGGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNAD 338

Query:  213 DGYHLG--------APSRLPGVIPRTGHRFQKWKGPDKISRIYGDWIDDIE 85
              YH G        A ++ PG+        QKWKGP KISRIYGDWIDDIE
Sbjct:  339 ASYHTGVALQRASSAVTQKPGI-----RTHQKWKGPAKISRIYGDWIDDIE 384

>sp|Q84UQ3|C3H56_ORYSJ Zinc finger CCCH domain-containing protein 56 OS=Oryza
        sativa subsp. japonica GN=Os08g0159800 PE=2 SV=1

          Length = 367

 Score =  228 bits (579), Expect = 1e-058
 Identities = 126/221 (57%), Positives = 143/221 (64%), Gaps = 41/221 (18%)
 Frame = -3

Query: 1215 NVVQIVTGGSKSGGDYW-------GDQPVWATEDEYGVWDREASVDNNSNSNYD-GRQSQ 1060
            N + I+     +G D W       GD  +WATED+Y           NS  N D G    
Sbjct:    5 NAIHIIP--DAAGPDAWANAAAQGGDAGIWATEDDY-----------NSQWNADGGGGGS 51

Query: 1059 TRSGSETP---NKKRNGQGGDAQA-TSRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAH 892
            +R+GSE P    K R G GG+    TS+S+AIGKMFFKTKLCCKFRAGTCPY+TNCNFAH
Sbjct:   52 SRAGSEQPPPGKKSRGGGGGEGGGNTSKSRAIGKMFFKTKLCCKFRAGTCPYVTNCNFAH 111

Query:  891 SIEELRRPPPNWQEIVAAHEEERGVTSEPREEFQIPSLGSSSFTV------------DSQ 748
             +EELR+PPPNWQEIVAAHEE     +E REE QIP + SS  T              S 
Sbjct:  112 GMEELRKPPPNWQEIVAAHEE----ATEAREEHQIPIMTSSGPTAGGDAGCGGGGGGGSG 167

Query:  747 RSYKGRHCKKFYTEEGCPYGDNCTFLHDEQSKARESVVISL 625
            R+YKGRHCKKFYT+EGCPYGD CTFLHDEQSKARESV ISL
Sbjct:  168 RAYKGRHCKKFYTDEGCPYGDACTFLHDEQSKARESVAISL 208


 Score =  168 bits (424), Expect = 1e-040
 Identities = 79/127 (62%), Positives = 95/127 (74%), Gaps = 5/127 (3%)
 Frame = -3

Query: 453 KPSNWKTRICNKWEQTGYCPFGSKCHFAHGAAELHRYGGGLVDIDAKDSPTSMDPNKQGM 274
           KPSNWKTRICNKWE TGYCPFGSKCHFAHGAAELH+YGGGLVDID++D+  + D +KQ +
Sbjct: 242 KPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHKYGGGLVDIDSRDAAATPD-SKQAV 300

Query: 273 MPSKTPIETIVAAGPSAAHSDGYHLGAPSRLPGVI-PRTG---HRFQKWKGPDKISRIYG 106
           + +K P ET  A+     H+D YHLG  ++   +   R+G      QKWKGPDKISRIYG
Sbjct: 301 VSAKAPAETAAASTTVLPHADVYHLGVQAQRSTIAGQRSGQVQRPIQKWKGPDKISRIYG 360

Query: 105 DWIDDIE 85
           DWID+ E
Sbjct: 361 DWIDETE 367

>sp|Q9LT81|C3H39_ARATH Zinc finger CCCH domain-containing protein 39
        OS=Arabidopsis thaliana GN=At3g19360 PE=2 SV=1

          Length = 386

 Score =  103 bits (256), Expect = 3e-021
 Identities = 54/122 (44%), Positives = 74/122 (60%), Gaps = 9/122 (7%)
 Frame = -3

Query: 987 SKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHSIEELRRPPPNWQEIV----AAHEEERG 820
           +K    +F+KT++C KFRAGTC     CNFAH IE+LR+PP NWQEIV    A  + ER 
Sbjct:  97 NKGTANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRER- 155

Query: 819 VTSEPREEFQIPSLG---SSSFTVDSQRSYKGRHCKKFYTEEGCPYGDNCTFLHDEQSKA 649
              E   E + PSL    ++++  D +   + + C+KF   E CPYGD C F+H++ SK 
Sbjct: 156 -ERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKF 214

Query: 648 RE 643
           RE
Sbjct: 215 RE 216


 Score =  67 bits (163), Expect = 2e-010
 Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 9/92 (9%)
 Frame = -3

Query: 468 SNSLLKPSNWKTRICNKWEQTGYCPFGSKCHFAHGAAELHRYGGGLVDIDAKDSPTSMDP 289
           +  ++K   WKTR+C K++ TG CPFG KCHFAHG AELH    G V+ +A ++  S+  
Sbjct: 261 NGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHN-SVGRVEGEAMNAVASV-- 317

Query: 288 NKQGMMPSK-----TPIETIVAAGPSAAHSDG 208
           NKQ ++P+       PI T V A  S  + +G
Sbjct: 318 NKQAVVPANEAFAMKPI-TQVTADSSGLNEEG 348

>sp|Q5PP65|C3H28_ARATH Zinc finger CCCH domain-containing protein 28
        OS=Arabidopsis thaliana GN=At2g35430 PE=2 SV=1

          Length = 252

 Score =  98 bits (243), Expect = 1e-019
 Identities = 57/116 (49%), Positives = 68/116 (58%), Gaps = 14/116 (12%)
 Frame = -3

Query: 996 TSRSKAIGKMFFKTKLCCKFRAGTCPY-ITNCNFAHSIEELR---RPPPNWQEIVAAHEE 829
           +S S  IGK FFKTKLC KFRAGTCPY  ++C+FAHS EELR    PPPNWQE V     
Sbjct:  61 SSSSSEIGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLPPPPPPNWQETVTE--- 117

Query: 828 ERGVTSEPREEFQIPSLGSSSFTVDSQRS--YKGRHCKKFYTEEGCPYGDNCTFLH 667
                S  RE F + SLG       + +S  +K R C K+ T   CP+G +C F H
Sbjct: 118 ----ASRNRESFAV-SLGPRGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHCHFAH 168


 Score =  91 bits (224), Expect = 2e-017
 Identities = 41/79 (51%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
 Frame = -3

Query: 456 LKPSNWKTRICNKWEQTGYCPFGSKCHFAHGAAELHRYGGGLVDIDAK-DSPTSMDPNKQ 280
           LK  NWKTRICNKW+ TGYCPFGS CHFAHG +ELH +GGGLV+ + K  +  ++D  ++
Sbjct: 139 LKSPNWKTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQR 198

Query: 279 GMMPSKTPIETIVAAGPSA 223
           G + + T   ++V+ G S+
Sbjct: 199 GQVDTVT---SLVSPGVSS 214

>sp|Q6L5G1|C3H39_ORYSJ Zinc finger CCCH domain-containing protein 39 OS=Oryza
        sativa subsp. japonica GN=Os05g0576300 PE=2 SV=1

          Length = 343

 Score =  55 bits (132), Expect = 8e-007
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = -3

Query: 441 WKTRICNKWEQTGYCPFGSKCHFAHGAAEL 352
           +KT +CNKWE+TG CP+G +C FAHG AEL
Sbjct: 269 FKTELCNKWEETGACPYGDQCQFAHGVAEL 298

>sp|A2ZVY5|C3H9_ORYSJ Zinc finger CCCH domain-containing protein 9 OS=Oryza
        sativa subsp. japonica GN=Os01g0645000 PE=2 SV=1

          Length = 333

 Score =  54 bits (127), Expect = 3e-006
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = -3

Query: 441 WKTRICNKWEQTGYCPFGSKCHFAHGAAEL 352
           +KT +CNKWE+TG CP+G +C FAHG  EL
Sbjct: 259 FKTELCNKWEETGDCPYGDQCQFAHGVTEL 288

  Database: Uniprot/SwissProt
    Posted date:  Thu Sep 27 17:53:50 2012
  Number of letters in database: 190,795,139
  Number of sequences in database:  537,505

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,608,607,123
Number of Sequences: 537505
Number of Extensions: 82608607123
Number of Successful Extensions: 482623804
Number of sequences better than 0.0: 0