Chrysanthenum transcriptome database

SwissProt blast output of UN55583


BLASTX 7.6.2

Query= UN55583 /QuerySize=759
        (758 letters)

Database: Uniprot/SwissProt;
          537,505 sequences; 190,795,139 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|O82245|TSPO_ARATH Translocator protein homolog OS=Arabidopsis...    141   5e-033
sp|P30536|TSPOA_HUMAN Translocator protein OS=Homo sapiens GN=TS...     54   1e-006
sp|P50637|TSPO_MOUSE Translocator protein OS=Mus musculus GN=Tsp...     53   2e-006
sp|P16257|TSPO_RAT Translocator protein OS=Rattus norvegicus GN=...     52   4e-006

>sp|O82245|TSPO_ARATH Translocator protein homolog OS=Arabidopsis thaliana
        GN=TSPO PE=1 SV=1

          Length = 196

 Score =  141 bits (355), Expect = 5e-033
 Identities = 70/181 (38%), Positives = 110/181 (60%), Gaps = 7/181 (3%)
 Frame = -2

Query: 736 TQELRHRTKDD-----SPITPQDDNITNTESKKPQQRTSIPRRGIRSLAIALAVPLALT- 575
           +Q++R+R  DD     + +   +    +    K  Q+ ++ +RG++SL +A+A P+ +T 
Sbjct:   3 SQDIRYRGGDDRDAATTAMAETERKSADDNKGKRDQKRAMAKRGLKSLTVAVAAPVLVTL 62

Query: 574 FANISMFGWNNYTTTQK-PFFIPPIWALHLTCLTSAFVMGLSAWLVWAEGGFHENPSAMG 398
           FA   +   + Y    K   +IPP+W LH TCL S+ +MGL+AWLVW +GGFH+ P+A+ 
Sbjct:  63 FATYFLGTSDGYGNRAKSSSWIPPLWLLHTTCLASSGLMGLAAWLVWVDGGFHKKPNALY 122

Query: 397 FYLGQIGLSLLWDPIFFKMNAPKVGLFVCLAQMATTFNCYRMFGKVNRTAGDLVKLCLVW 218
            YL Q  L L+WDP+ F++ +   GL V L Q A  F CY+ F +++  AG+LVK CL W
Sbjct: 123 LYLAQFLLCLVWDPVTFRVGSGVAGLAVWLGQSAALFGCYKAFNEISPVAGNLVKPCLAW 182

Query: 217 S 215
           +
Sbjct: 183 A 183

>sp|P30536|TSPOA_HUMAN Translocator protein OS=Homo sapiens GN=TSPO PE=1 SV=3

          Length = 169

 Score =  54 bits (127), Expect = 1e-006
 Identities = 43/116 (37%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
 Frame = -2

Query: 541 YTTTQKPFFIPPIWALHLTCLTSAFVMGLSAWLVWAE-GGFHENPSA-MGFYLGQIGLSL 368
           Y   QKP + PP W L     T    MG  ++LVW E GGF E     +G Y GQ+ L+ 
Sbjct:  34 YAGLQKPSWHPPHWVLGPVWGTLYSAMGYGSYLVWKELGGFTEKAVVPLGLYTGQLALNW 93

Query: 367 LWDPIFFKMNAPKVG------LFVCLAQMATTFNCYRMFGKVNRTAGDLVKLCLVW 218
            W PIFF   A ++G      L V  A  ATT   Y    +V+  A  L+   L W
Sbjct:  94 AWPPIFF--GARQMGWALVDLLLVSGAAAATTVAWY----QVSPLAARLLYPYLAW 143

>sp|P50637|TSPO_MOUSE Translocator protein OS=Mus musculus GN=Tspo PE=2 SV=1

          Length = 169

 Score =  53 bits (125), Expect = 2e-006
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -2

Query: 541 YTTTQKPFFIPPIWALHLTCLTSAFVMGLSAWLVWAE-GGFHENPSA-MGFYLGQIGLSL 368
           Y + QKP + PP W L     T    MG  +++VW E GGF E+    +G Y GQ+ L+ 
Sbjct:  34 YASLQKPSWHPPRWTLAPIWGTLYSAMGYGSYIVWKELGGFTEDAMVPLGLYTGQLALNW 93

Query: 367 LWDPIFF 347
            W PIFF
Sbjct:  94 AWPPIFF 100

>sp|P16257|TSPO_RAT Translocator protein OS=Rattus norvegicus GN=Tspo PE=1 SV=1

          Length = 169

 Score =  52 bits (123), Expect = 4e-006
 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
 Frame = -2

Query: 541 YTTTQKPFFIPPIWALHLTCLTSAFVMGLSAWLVWAE-GGFHENPSA-MGFYLGQIGLSL 368
           Y + QKP + PP W L     T    MG  ++++W E GGF E     +G Y GQ+ L+ 
Sbjct:  34 YASLQKPSWHPPRWTLAPIWGTLYSAMGYGSYIIWKELGGFTEEAMVPLGLYTGQLALNW 93

Query: 367 LWDPIFF 347
            W PIFF
Sbjct:  94 AWPPIFF 100

  Database: Uniprot/SwissProt
    Posted date:  Thu Sep 27 17:53:50 2012
  Number of letters in database: 190,795,139
  Number of sequences in database:  537,505

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,841,094,101
Number of Sequences: 537505
Number of Extensions: 81841094101
Number of Successful Extensions: 468046604
Number of sequences better than 0.0: 0