SwissProt blast output of UN55583
BLASTX 7.6.2 Query= UN55583 /QuerySize=759 (758 letters) Database: Uniprot/SwissProt; 537,505 sequences; 190,795,139 total letters Score E Sequences producing significant alignments: (bits) Value sp|O82245|TSPO_ARATH Translocator protein homolog OS=Arabidopsis... 141 5e-033 sp|P30536|TSPOA_HUMAN Translocator protein OS=Homo sapiens GN=TS... 54 1e-006 sp|P50637|TSPO_MOUSE Translocator protein OS=Mus musculus GN=Tsp... 53 2e-006 sp|P16257|TSPO_RAT Translocator protein OS=Rattus norvegicus GN=... 52 4e-006 >sp|O82245|TSPO_ARATH Translocator protein homolog OS=Arabidopsis thaliana GN=TSPO PE=1 SV=1 Length = 196 Score = 141 bits (355), Expect = 5e-033 Identities = 70/181 (38%), Positives = 110/181 (60%), Gaps = 7/181 (3%) Frame = -2 Query: 736 TQELRHRTKDD-----SPITPQDDNITNTESKKPQQRTSIPRRGIRSLAIALAVPLALT- 575 +Q++R+R DD + + + + K Q+ ++ +RG++SL +A+A P+ +T Sbjct: 3 SQDIRYRGGDDRDAATTAMAETERKSADDNKGKRDQKRAMAKRGLKSLTVAVAAPVLVTL 62 Query: 574 FANISMFGWNNYTTTQK-PFFIPPIWALHLTCLTSAFVMGLSAWLVWAEGGFHENPSAMG 398 FA + + Y K +IPP+W LH TCL S+ +MGL+AWLVW +GGFH+ P+A+ Sbjct: 63 FATYFLGTSDGYGNRAKSSSWIPPLWLLHTTCLASSGLMGLAAWLVWVDGGFHKKPNALY 122 Query: 397 FYLGQIGLSLLWDPIFFKMNAPKVGLFVCLAQMATTFNCYRMFGKVNRTAGDLVKLCLVW 218 YL Q L L+WDP+ F++ + GL V L Q A F CY+ F +++ AG+LVK CL W Sbjct: 123 LYLAQFLLCLVWDPVTFRVGSGVAGLAVWLGQSAALFGCYKAFNEISPVAGNLVKPCLAW 182 Query: 217 S 215 + Sbjct: 183 A 183 >sp|P30536|TSPOA_HUMAN Translocator protein OS=Homo sapiens GN=TSPO PE=1 SV=3 Length = 169 Score = 54 bits (127), Expect = 1e-006 Identities = 43/116 (37%), Positives = 54/116 (46%), Gaps = 14/116 (12%) Frame = -2 Query: 541 YTTTQKPFFIPPIWALHLTCLTSAFVMGLSAWLVWAE-GGFHENPSA-MGFYLGQIGLSL 368 Y QKP + PP W L T MG ++LVW E GGF E +G Y GQ+ L+ Sbjct: 34 YAGLQKPSWHPPHWVLGPVWGTLYSAMGYGSYLVWKELGGFTEKAVVPLGLYTGQLALNW 93 Query: 367 LWDPIFFKMNAPKVG------LFVCLAQMATTFNCYRMFGKVNRTAGDLVKLCLVW 218 W PIFF A ++G L V A ATT Y +V+ A L+ L W Sbjct: 94 AWPPIFF--GARQMGWALVDLLLVSGAAAATTVAWY----QVSPLAARLLYPYLAW 143 >sp|P50637|TSPO_MOUSE Translocator protein OS=Mus musculus GN=Tspo PE=2 SV=1 Length = 169 Score = 53 bits (125), Expect = 2e-006 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = -2 Query: 541 YTTTQKPFFIPPIWALHLTCLTSAFVMGLSAWLVWAE-GGFHENPSA-MGFYLGQIGLSL 368 Y + QKP + PP W L T MG +++VW E GGF E+ +G Y GQ+ L+ Sbjct: 34 YASLQKPSWHPPRWTLAPIWGTLYSAMGYGSYIVWKELGGFTEDAMVPLGLYTGQLALNW 93 Query: 367 LWDPIFF 347 W PIFF Sbjct: 94 AWPPIFF 100 >sp|P16257|TSPO_RAT Translocator protein OS=Rattus norvegicus GN=Tspo PE=1 SV=1 Length = 169 Score = 52 bits (123), Expect = 4e-006 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = -2 Query: 541 YTTTQKPFFIPPIWALHLTCLTSAFVMGLSAWLVWAE-GGFHENPSA-MGFYLGQIGLSL 368 Y + QKP + PP W L T MG ++++W E GGF E +G Y GQ+ L+ Sbjct: 34 YASLQKPSWHPPRWTLAPIWGTLYSAMGYGSYIIWKELGGFTEEAMVPLGLYTGQLALNW 93 Query: 367 LWDPIFF 347 W PIFF Sbjct: 94 AWPPIFF 100 Database: Uniprot/SwissProt Posted date: Thu Sep 27 17:53:50 2012 Number of letters in database: 190,795,139 Number of sequences in database: 537,505 Lambda K H 0.267 0.041 0.140 Gapped Lambda K H 0.267 0.041 0.140 Matrix: blosum62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,841,094,101 Number of Sequences: 537505 Number of Extensions: 81841094101 Number of Successful Extensions: 468046604 Number of sequences better than 0.0: 0 |