Chrysanthenum transcriptome database

SwissProt blast output of UN44993


BLASTX 7.6.2

Query= UN44993 /QuerySize=742
        (741 letters)

Database: Uniprot/SwissProt;
          537,505 sequences; 190,795,139 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q9SZF7|SHR_ARATH Protein SHORT-ROOT OS=Arabidopsis thaliana G...     69   3e-011
sp|A2XIA8|SHR2_ORYSI Protein SHORT-ROOT 2 OS=Oryza sativa subsp....     68   5e-011
sp|Q75I13|SHR2_ORYSJ Protein SHORT-ROOT 2 OS=Oryza sativa subsp....     68   5e-011
sp|A2YN56|SHR1_ORYSI Protein SHORT-ROOT 1 OS=Oryza sativa subsp....     67   2e-010
sp|Q8H2X8|SHR1_ORYSJ Protein SHORT-ROOT 1 OS=Oryza sativa subsp....     67   2e-010

>sp|Q9SZF7|SHR_ARATH Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1
        SV=1

          Length = 531

 Score =  69 bits (167), Expect = 3e-011
 Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = -1

Query: 186 SNSFTTNT-WXXXXXXXXXXXXXXKNSSRLQQLMWMLNELSSPYGDTDQKLSSYFLQALF 10
           S  F+ N  W              K+++R QQ++W LNELSSPYGDT+QKL+SYFLQALF
Sbjct: 133 SFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALF 192

Query:   9 SRM 1
           +RM
Sbjct: 193 NRM 195

>sp|A2XIA8|SHR2_ORYSI Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica GN=SHR2
        PE=3 SV=1

          Length = 603

 Score =  68 bits (165), Expect = 5e-011
 Identities = 30/58 (51%), Positives = 39/58 (67%)
 Frame = -1

Query: 174 TTNTWXXXXXXXXXXXXXXKNSSRLQQLMWMLNELSSPYGDTDQKLSSYFLQALFSRM 1
           ++  W              ++S R+QQLMWMLNEL+SPYGD DQKL+SYFLQ LF+R+
Sbjct: 183 SSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARL 240

>sp|Q75I13|SHR2_ORYSJ Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica
        GN=SHR2 PE=1 SV=1

          Length = 603

 Score =  68 bits (165), Expect = 5e-011
 Identities = 30/58 (51%), Positives = 39/58 (67%)
 Frame = -1

Query: 174 TTNTWXXXXXXXXXXXXXXKNSSRLQQLMWMLNELSSPYGDTDQKLSSYFLQALFSRM 1
           ++  W              ++S R+QQLMWMLNEL+SPYGD DQKL+SYFLQ LF+R+
Sbjct: 183 SSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARL 240

>sp|A2YN56|SHR1_ORYSI Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica GN=SHR1
        PE=3 SV=1

          Length = 602

 Score =  67 bits (161), Expect = 2e-010
 Identities = 29/54 (53%), Positives = 37/54 (68%)
 Frame = -1

Query: 162 WXXXXXXXXXXXXXXKNSSRLQQLMWMLNELSSPYGDTDQKLSSYFLQALFSRM 1
           W              ++S R+QQLMWMLNEL+SPYGD +QKL+SYFLQ LF+R+
Sbjct: 191 WASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARL 244

>sp|Q8H2X8|SHR1_ORYSJ Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica
        GN=SHR1 PE=1 SV=2

          Length = 602

 Score =  67 bits (161), Expect = 2e-010
 Identities = 29/54 (53%), Positives = 37/54 (68%)
 Frame = -1

Query: 162 WXXXXXXXXXXXXXXKNSSRLQQLMWMLNELSSPYGDTDQKLSSYFLQALFSRM 1
           W              ++S R+QQLMWMLNEL+SPYGD +QKL+SYFLQ LF+R+
Sbjct: 191 WASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQGLFARL 244

  Database: Uniprot/SwissProt
    Posted date:  Thu Sep 27 17:53:50 2012
  Number of letters in database: 190,795,139
  Number of sequences in database:  537,505

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,211,552,008
Number of Sequences: 537505
Number of Extensions: 64211552008
Number of Successful Extensions: 375546033
Number of sequences better than 0.0: 0