Chrysanthenum transcriptome database

GenBank blast output of UN43548


BLASTX 7.6.2

Query= UN43548 /QuerySize=611
        (610 letters)

Database: GenBank nr;
          20,571,509 sequences; 7,061,663,739 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|359487636|ref|XP_002279490.2| PREDICTED: translation initiati...    107   2e-021
gi|42566430|ref|NP_192854.2| translation initiation factor IF-2 ...     65   6e-009
gi|297809341|ref|XP_002872554.1| hypothetical protein ARALYDRAFT...     65   6e-009
gi|51970998|dbj|BAD44191.1| putative translation initiation fact...     62   5e-008
gi|357130053|ref|XP_003566671.1| PREDICTED: translation initiati...     57   2e-006
gi|242073210|ref|XP_002446541.1| hypothetical protein SORBIDRAFT...     56   5e-006
gi|357485531|ref|XP_003613053.1| Translation initiation factor I...     56   5e-006

>gi|359487636|ref|XP_002279490.2| PREDICTED: translation initiation factor
        IF-2-like [Vitis vinifera]

          Length = 725

 Score =  107 bits (265), Expect = 2e-021
 Identities = 67/161 (41%), Positives = 92/161 (57%), Gaps = 5/161 (3%)
 Frame = -2

Query: 477 MAWRELGKKSVRASLSRTLNLIAASRDSVLRNSFGGVKSNL--LSPSVGHIRGYTSNSAL 304
           MAWRE+GKKS+ A+L++ L     SRD     S   ++  L  +S S+ H+  ++++ + 
Sbjct:   1 MAWREVGKKSICANLTKAL-ASTKSRDVPDPLSTPILEDALKSISSSIKHVPVFSASKSS 59

Query: 303 LGDDTLNFLTNRFLIRRFHATPELLGSRRGDVLEEXXXXXXXXXXXXXXPENVKPPVEAP 124
           LG D    L NR L RRFHA+P LL  RR D  E                  ++PPVEAP
Sbjct:  60 LGADKCQILPNRPLTRRFHASPGLLARRRSD--EPFGLKTPKREKYVKRESKMQPPVEAP 117

Query: 123 YVPPRLQKTAKSYSDKTVEIFEGMTTSELAKRCGQYPSTLQ 1
           YV P+ ++T KS  D+T++IFEGMT  ELAK   +  STLQ
Sbjct: 118 YVHPKPKRTTKSLPDRTIDIFEGMTIGELAKHTNESISTLQ 158

>gi|42566430|ref|NP_192854.2| translation initiation factor IF-2 [Arabidopsis
        thaliana]

          Length = 743

 Score =  65 bits (158), Expect = 6e-009
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = -2

Query: 144 KPPVEAPYVPPRLQKTAKSYSDKTVEIFEGMTTSELAKRCGQYPSTLQ 1
           KPPVEAPYVPPRL++ AK    KTV+IFEGMT  EL+KR G+  + LQ
Sbjct: 124 KPPVEAPYVPPRLKRLAKGLPGKTVDIFEGMTLLELSKRTGESVAVLQ 171

>gi|297809341|ref|XP_002872554.1| hypothetical protein ARALYDRAFT_489954
        [Arabidopsis lyrata subsp. lyrata]

          Length = 746

 Score =  65 bits (158), Expect = 6e-009
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = -2

Query: 144 KPPVEAPYVPPRLQKTAKSYSDKTVEIFEGMTTSELAKRCGQYPSTLQ 1
           KPPVEAPYVPPRL++ AK   +KTV+IFEGMT  EL++R G+  + LQ
Sbjct: 127 KPPVEAPYVPPRLKRLAKGLPEKTVDIFEGMTLLELSRRTGESVAVLQ 174

>gi|51970998|dbj|BAD44191.1| putative translation initiation factor IF-2
        [Arabidopsis thaliana]

          Length = 743

 Score =  62 bits (150), Expect = 5e-008
 Identities = 30/48 (62%), Positives = 36/48 (75%)
 Frame = -2

Query: 144 KPPVEAPYVPPRLQKTAKSYSDKTVEIFEGMTTSELAKRCGQYPSTLQ 1
           KPPVEAPYVPPRL++ AK    KTV+IFE MT  EL+KR G+  + LQ
Sbjct: 124 KPPVEAPYVPPRLKRLAKGLPGKTVDIFEWMTLLELSKRTGESVAVLQ 171

>gi|357130053|ref|XP_003566671.1| PREDICTED: translation initiation factor
        IF-2-like [Brachypodium distachyon]

          Length = 711

 Score =  57 bits (137), Expect = 2e-006
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = -2

Query: 144 KPPVEAPYVPPRLQKTAKSYSDKTVEIFEGMTTSELAKRCGQYPSTLQ 1
           +PPVEAPYV P+ + T K+  DKTVEIF+GMT  +L+KR G   S LQ
Sbjct:  98 QPPVEAPYVAPKPKMTIKTSPDKTVEIFDGMTLLDLSKRSGATISALQ 145

>gi|242073210|ref|XP_002446541.1| hypothetical protein SORBIDRAFT_06g017820
        [Sorghum bicolor]

          Length = 685

 Score =  56 bits (133), Expect = 5e-006
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = -2

Query: 144 KPPVEAPYVPPRLQKTAKSYSDKTVEIFEGMTTSELAKRCGQYPSTLQ 1
           +PPVEAPYV  + +   KS  DKTVEIF+GMT  +L+KR G + STLQ
Sbjct:  72 QPPVEAPYVARKPKIPRKSLPDKTVEIFDGMTLLDLSKRTGAHISTLQ 119

>gi|357485531|ref|XP_003613053.1| Translation initiation factor IF-2 [Medicago
        truncatula]

          Length = 749

 Score =  56 bits (133), Expect = 5e-006
 Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
 Frame = -2

Query: 144 KPPVEAPYVPPRLQKTAKSYSDKTVEIFEGMTTSELAKRCGQYPSTLQ 1
           +PPV+AP+VP ++  T KS  DKT+EIFEGMT  ELAKR G+  S+LQ
Sbjct:  59 QPPVDAPHVPCKVTAT-KSNPDKTIEIFEGMTLVELAKRSGKSVSSLQ 105

  Database: GenBank nr
    Posted date:  Thu Sep 27 19:07:00 2012
  Number of letters in database: 7,061,663,739
  Number of sequences in database:  20,571,509

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,272,374,680,604
Number of Sequences: 20571509
Number of Extensions: 2272374680604
Number of Successful Extensions: 746763901
Number of sequences better than 0.0: 0