Chrysanthenum transcriptome database

GenBank blast output of UN06283


BLASTX 7.6.2

Query= UN06283 /QuerySize=327
        (326 letters)

Database: GenBank nr;
          20,571,509 sequences; 7,061,663,739 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|255559030|ref|XP_002520538.1| zinc finger protein, putative [...     57   9e-007
gi|297827579|ref|XP_002881672.1| hypothetical protein ARALYDRAFT...     57   1e-006
gi|18405141|ref|NP_030517.1| RING-H2 finger C2A [Arabidopsis tha...     56   2e-006
gi|148633579|gb|ABR00802.1| unknown [Arabidopsis thaliana]              56   2e-006
gi|357454219|ref|XP_003597390.1| RING finger protein [Medicago t...     55   3e-006

>gi|255559030|ref|XP_002520538.1| zinc finger protein, putative [Ricinus
        communis]

          Length = 318

 Score =  57 bits (136), Expect = 9e-007
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 5/44 (11%)
 Frame = -3

Query: 246 STTMATASYWCYRCTRFITV-----TNTLICPHCDTGFIEAVDS 130
           S+  AT SYWCYRCTRFI+V        + CPHCD GFIE +++
Sbjct:   2 SSATATTSYWCYRCTRFISVLPSEENTDISCPHCDGGFIEEIET 45

>gi|297827579|ref|XP_002881672.1| hypothetical protein ARALYDRAFT_903223
        [Arabidopsis lyrata subsp. lyrata]

          Length = 399

 Score =  57 bits (135), Expect = 1e-006
 Identities = 22/44 (50%), Positives = 30/44 (68%)
 Frame = -3

Query: 237 MATASYWCYRCTRFITVTNTLICPHCDTGFIEAVDSHAPSHPSD 106
           MA+ SYWCY C+RF+ V+++L CP CD GF+E +       PSD
Sbjct:   1 MASGSYWCYSCSRFVWVSDSLSCPDCDGGFLEHIQETLDFTPSD 44

>gi|18405141|ref|NP_030517.1| RING-H2 finger C2A [Arabidopsis thaliana]

          Length = 401

 Score =  56 bits (134), Expect = 2e-006
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = -3

Query: 237 MATASYWCYRCTRFITVTNTLICPHCDTGFIEAVDSHAPSHPSD 106
           MA+ SYWCY C+RF+ V++++ CP CD GF+E +       PSD
Sbjct:   1 MASGSYWCYSCSRFVWVSDSISCPDCDGGFLELIQEPLDFTPSD 44

>gi|148633579|gb|ABR00802.1| unknown [Arabidopsis thaliana]

          Length = 45

 Score =  56 bits (134), Expect = 2e-006
 Identities = 21/44 (47%), Positives = 30/44 (68%)
 Frame = -3

Query: 237 MATASYWCYRCTRFITVTNTLICPHCDTGFIEAVDSHAPSHPSD 106
           MA+ SYWCY C+RF+ V++++ CP CD GF+E +       PSD
Sbjct:   1 MASGSYWCYSCSRFVWVSDSISCPDCDGGFLELIQEPLDFTPSD 44

>gi|357454219|ref|XP_003597390.1| RING finger protein [Medicago truncatula]

          Length = 355

 Score =  55 bits (132), Expect = 3e-006
 Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
 Frame = -3

Query: 258 NRSNSTTMATASYWCYRCTRFITV--TNTLICPHCDTGFIEAVDSHAPSHPS 109
           N    T  +T S+WCY CTRFI +   N ++CPHC  GF+E +  HA   P+
Sbjct:   2 NSETETPSSTTSFWCYSCTRFIHILNQNNVVCPHCQNGFVEEI--HAGQSPA 51

  Database: GenBank nr
    Posted date:  Thu Sep 27 19:07:00 2012
  Number of letters in database: 7,061,663,739
  Number of sequences in database:  20,571,509

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 736,532,996,843
Number of Sequences: 20571509
Number of Extensions: 736532996843
Number of Successful Extensions: 430066613
Number of sequences better than 0.0: 0